BLASTX nr result
ID: Panax24_contig00020480
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00020480
(480 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GAV86714.1 RB_B domain-containing protein/RB_A domain-containing... 62 2e-08
XP_008446983.1 PREDICTED: retinoblastoma-related protein [Cucumi... 61 6e-08
XP_004142479.1 PREDICTED: retinoblastoma-related protein isoform... 61 6e-08
XP_011655942.1 PREDICTED: retinoblastoma-related protein isoform... 61 6e-08
OAY54738.1 hypothetical protein MANES_03G097800 [Manihot esculen... 60 1e-07
XP_010648448.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
A7P514.1 RecName: Full=Retinoblastoma-related protein AEV45768.1... 60 2e-07
XP_010648447.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_019075076.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
XP_019075075.1 PREDICTED: retinoblastoma-related protein isoform... 60 2e-07
KDO44613.1 hypothetical protein CISIN_1g0017012mg, partial [Citr... 59 3e-07
XP_006432410.1 hypothetical protein CICLE_v10000128mg [Citrus cl... 59 3e-07
KDO44612.1 hypothetical protein CISIN_1g0017012mg, partial [Citr... 59 3e-07
XP_015387490.1 PREDICTED: retinoblastoma-related protein isoform... 59 3e-07
XP_006432412.1 hypothetical protein CICLE_v10000128mg [Citrus cl... 59 3e-07
XP_006407347.1 hypothetical protein EUTSA_v10019977mg [Eutrema s... 59 3e-07
XP_007010834.2 PREDICTED: retinoblastoma-related protein [Theobr... 59 3e-07
XP_006407348.1 hypothetical protein EUTSA_v10019977mg [Eutrema s... 59 3e-07
EOY19644.1 Retinoblastoma-related 1 [Theobroma cacao] 59 3e-07
XP_006465771.1 PREDICTED: retinoblastoma-related protein isoform... 59 3e-07
>GAV86714.1 RB_B domain-containing protein/RB_A domain-containing
protein/DUF3452 domain-containing protein [Cephalotus
follicularis]
Length = 1015
Score = 62.4 bits (150), Expect = 2e-08
Identities = 33/52 (63%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +1
Query: 118 LHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
LH + PGQNGD++ PKRVCTD RSVLVERNSFTSP+KD I L +K+
Sbjct: 656 LHKNDISPGQNGDLKSPKRVCTDLRSVLVERNSFTSPIKDRMMTINNLKSKL 707
>XP_008446983.1 PREDICTED: retinoblastoma-related protein [Cucumis melo]
Length = 1024
Score = 61.2 bits (147), Expect = 6e-08
Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S T L PGQNGDI+ PKR+CTD RSVLVERNSFTSPVKD
Sbjct: 660 SATPNLQKHESLPGQNGDIRSPKRLCTDLRSVLVERNSFTSPVKD 704
>XP_004142479.1 PREDICTED: retinoblastoma-related protein isoform X2 [Cucumis
sativus] KGN52338.1 hypothetical protein Csa_5G625980
[Cucumis sativus]
Length = 1024
Score = 61.2 bits (147), Expect = 6e-08
Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S T L PGQNGDI+ PKR+CTD RSVLVERNSFTSPVKD
Sbjct: 660 SATPNLQRHESLPGQNGDIRSPKRLCTDLRSVLVERNSFTSPVKD 704
>XP_011655942.1 PREDICTED: retinoblastoma-related protein isoform X1 [Cucumis
sativus]
Length = 1025
Score = 61.2 bits (147), Expect = 6e-08
Identities = 32/45 (71%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S T L PGQNGDI+ PKR+CTD RSVLVERNSFTSPVKD
Sbjct: 661 SATPNLQRHESLPGQNGDIRSPKRLCTDLRSVLVERNSFTSPVKD 705
>OAY54738.1 hypothetical protein MANES_03G097800 [Manihot esculenta] OAY54739.1
hypothetical protein MANES_03G097800 [Manihot esculenta]
OAY54740.1 hypothetical protein MANES_03G097800 [Manihot
esculenta]
Length = 886
Score = 60.5 bits (145), Expect = 1e-07
Identities = 32/45 (71%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
PGQNGDI+ PKR CTD RSVLVERNSFTSPVKD I L +K+
Sbjct: 533 PGQNGDIRSPKRPCTDIRSVLVERNSFTSPVKDRLLAITNLKSKL 577
>XP_010648448.1 PREDICTED: retinoblastoma-related protein isoform X4 [Vitis
vinifera] CBI20795.3 unnamed protein product, partial
[Vitis vinifera]
Length = 1006
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
PGQNGDI+ PKRVC D RSVLVERNSFTSPVKD + L +K+
Sbjct: 654 PGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 698
>A7P514.1 RecName: Full=Retinoblastoma-related protein AEV45768.1 RBR protein
[Vitis pseudoreticulata]
Length = 1007
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
PGQNGDI+ PKRVC D RSVLVERNSFTSPVKD + L +K+
Sbjct: 655 PGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 699
>XP_010648447.1 PREDICTED: retinoblastoma-related protein isoform X3 [Vitis
vinifera]
Length = 1009
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
PGQNGDI+ PKRVC D RSVLVERNSFTSPVKD + L +K+
Sbjct: 657 PGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 701
>XP_019075076.1 PREDICTED: retinoblastoma-related protein isoform X2 [Vitis
vinifera]
Length = 1010
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
PGQNGDI+ PKRVC D RSVLVERNSFTSPVKD + L +K+
Sbjct: 658 PGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 702
>XP_019075075.1 PREDICTED: retinoblastoma-related protein isoform X1 [Vitis
vinifera]
Length = 1013
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/45 (68%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKDH*CCIYVLNNKV 270
PGQNGDI+ PKRVC D RSVLVERNSFTSPVKD + L +K+
Sbjct: 661 PGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKL 705
>KDO44613.1 hypothetical protein CISIN_1g0017012mg, partial [Citrus sinensis]
Length = 822
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S + LH PGQNGDI+ PKR CTD RSVLVERN+FTSPVKD
Sbjct: 546 SPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKD 590
>XP_006432410.1 hypothetical protein CICLE_v10000128mg [Citrus clementina]
XP_006432411.1 hypothetical protein CICLE_v10000128mg
[Citrus clementina] ESR45650.1 hypothetical protein
CICLE_v10000128mg [Citrus clementina] ESR45651.1
hypothetical protein CICLE_v10000128mg [Citrus
clementina]
Length = 912
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S + LH PGQNGDI+ PKR CTD RSVLVERN+FTSPVKD
Sbjct: 546 SPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKD 590
>KDO44612.1 hypothetical protein CISIN_1g0017012mg, partial [Citrus sinensis]
Length = 934
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S + LH PGQNGDI+ PKR CTD RSVLVERN+FTSPVKD
Sbjct: 658 SPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKD 702
>XP_015387490.1 PREDICTED: retinoblastoma-related protein isoform X2 [Citrus
sinensis]
Length = 957
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S + LH PGQNGDI+ PKR CTD RSVLVERN+FTSPVKD
Sbjct: 591 SPVHSLHKHETSPGQNGDIRSPKRSCTDYRSVLVERNNFTSPVKD 635
>XP_006432412.1 hypothetical protein CICLE_v10000128mg [Citrus clementina]
ESR45652.1 hypothetical protein CICLE_v10000128mg
[Citrus clementina]
Length = 957
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S + LH PGQNGDI+ PKR CTD RSVLVERN+FTSPVKD
Sbjct: 591 SPVHSLHKHETSPGQNGDIRSPKRPCTDYRSVLVERNNFTSPVKD 635
>XP_006407347.1 hypothetical protein EUTSA_v10019977mg [Eutrema salsugineum]
ESQ48800.1 hypothetical protein EUTSA_v10019977mg
[Eutrema salsugineum]
Length = 1010
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
PGQNGDI+ PKR+CTD RS+LVERNSFTSPVKD
Sbjct: 660 PGQNGDIKSPKRLCTDYRSILVERNSFTSPVKD 692
>XP_007010834.2 PREDICTED: retinoblastoma-related protein [Theobroma cacao]
XP_017984708.1 PREDICTED: retinoblastoma-related protein
[Theobroma cacao] XP_017984709.1 PREDICTED:
retinoblastoma-related protein [Theobroma cacao]
Length = 1011
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
PGQNGD++ PKR+CTD RSVLVERNSFTSPVKD
Sbjct: 661 PGQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 693
>XP_006407348.1 hypothetical protein EUTSA_v10019977mg [Eutrema salsugineum]
ESQ48801.1 hypothetical protein EUTSA_v10019977mg
[Eutrema salsugineum]
Length = 1011
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
PGQNGDI+ PKR+CTD RS+LVERNSFTSPVKD
Sbjct: 660 PGQNGDIKSPKRLCTDYRSILVERNSFTSPVKD 692
>EOY19644.1 Retinoblastoma-related 1 [Theobroma cacao]
Length = 1011
Score = 59.3 bits (142), Expect = 3e-07
Identities = 28/33 (84%), Positives = 31/33 (93%), Gaps = 1/33 (3%)
Frame = +1
Query: 139 PGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
PGQNGD++ PKR+CTD RSVLVERNSFTSPVKD
Sbjct: 661 PGQNGDVRSPKRLCTDYRSVLVERNSFTSPVKD 693
>XP_006465771.1 PREDICTED: retinoblastoma-related protein isoform X1 [Citrus
sinensis]
Length = 1024
Score = 59.3 bits (142), Expect = 3e-07
Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 103 SVTNYLHWANDFPGQNGDIQLPKRVCTD-RSVLVERNSFTSPVKD 234
S + LH PGQNGDI+ PKR CTD RSVLVERN+FTSPVKD
Sbjct: 658 SPVHSLHKHETSPGQNGDIRSPKRSCTDYRSVLVERNNFTSPVKD 702