BLASTX nr result

ID: Panax24_contig00020231 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00020231
         (391 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017243192.1 PREDICTED: ribosomal RNA small subunit methyltran...    61   3e-08
XP_002281008.1 PREDICTED: uncharacterized protein LOC100262613 [...    59   2e-07
CBI19761.3 unnamed protein product, partial [Vitis vinifera]           59   2e-07
GAV60395.1 TP_methylase domain-containing protein [Cephalotus fo...    58   2e-07
CDP07469.1 unnamed protein product [Coffea canephora]                  57   6e-07
XP_006473568.1 PREDICTED: ribosomal RNA small subunit methyltran...    57   8e-07
XP_006435070.1 hypothetical protein CICLE_v10001571mg [Citrus cl...    57   8e-07
KVH98413.1 rRNA small subunit methyltransferase I [Cynara cardun...    54   5e-06
XP_010254694.1 PREDICTED: uncharacterized protein LOC104595599 i...    54   7e-06
XP_010254691.1 PREDICTED: uncharacterized protein LOC104595599 i...    54   7e-06
XP_015884956.1 PREDICTED: ribosomal RNA small subunit methyltran...    54   9e-06
XP_012071940.1 PREDICTED: uncharacterized protein LOC105633854 [...    54   1e-05
XP_015884952.1 PREDICTED: ribosomal RNA small subunit methyltran...    54   1e-05

>XP_017243192.1 PREDICTED: ribosomal RNA small subunit methyltransferase I isoform
           X1 [Daucus carota subsp. sativus]
          Length = 365

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEED 100
           AVK+VAAGTSTRRKTIYSLALRKFGKQ EAE+D
Sbjct: 328 AVKVVAAGTSTRRKTIYSLALRKFGKQVEAEDD 360


>XP_002281008.1 PREDICTED: uncharacterized protein LOC100262613 [Vitis vinifera]
           XP_010664734.1 PREDICTED: uncharacterized protein
           LOC100262613 [Vitis vinifera] XP_010664735.1 PREDICTED:
           uncharacterized protein LOC100262613 [Vitis vinifera]
          Length = 351

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLVA GTS RRKTIYSLALRKFGKQ EAE+D +
Sbjct: 317 AVKLVAEGTSMRRKTIYSLALRKFGKQLEAEDDSN 351


>CBI19761.3 unnamed protein product, partial [Vitis vinifera]
          Length = 374

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLVA GTS RRKTIYSLALRKFGKQ EAE+D +
Sbjct: 340 AVKLVAEGTSMRRKTIYSLALRKFGKQLEAEDDSN 374


>GAV60395.1 TP_methylase domain-containing protein [Cephalotus follicularis]
          Length = 358

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLVA G+S RRKTIYSLALRKFGKQ EAEED +
Sbjct: 324 AVKLVAEGSSLRRKTIYSLALRKFGKQLEAEEDSN 358


>CDP07469.1 unnamed protein product [Coffea canephora]
          Length = 348

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEED 100
           AVKLVAAGTS RRKTIYS+ALRKFG QFE+E++
Sbjct: 316 AVKLVAAGTSVRRKTIYSIALRKFGNQFESEDN 348


>XP_006473568.1 PREDICTED: ribosomal RNA small subunit methyltransferase I [Citrus
           sinensis] XP_006473569.1 PREDICTED: ribosomal RNA small
           subunit methyltransferase I [Citrus sinensis]
          Length = 368

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLVA GTS RRKTIYSLALRKFGKQ EA +D +
Sbjct: 332 AVKLVAQGTSVRRKTIYSLALRKFGKQIEAADDSN 366


>XP_006435070.1 hypothetical protein CICLE_v10001571mg [Citrus clementina]
           ESR48310.1 hypothetical protein CICLE_v10001571mg
           [Citrus clementina] KDO84674.1 hypothetical protein
           CISIN_1g016688mg [Citrus sinensis] KDO84675.1
           hypothetical protein CISIN_1g016688mg [Citrus sinensis]
          Length = 368

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLVA GTS RRKTIYSLALRKFGKQ EA +D +
Sbjct: 332 AVKLVAQGTSVRRKTIYSLALRKFGKQIEAADDSN 366


>KVH98413.1 rRNA small subunit methyltransferase I [Cynara cardunculus var.
           scolymus]
          Length = 320

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEED 100
           AVKLVAAGTS +RKTIYSLALRKFG+Q +A +D
Sbjct: 286 AVKLVAAGTSMKRKTIYSLALRKFGRQHDARDD 318


>XP_010254694.1 PREDICTED: uncharacterized protein LOC104595599 isoform X3 [Nelumbo
           nucifera]
          Length = 326

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLV+ GTS +RKTIYSLALRKFGK  EAE+D +
Sbjct: 289 AVKLVSEGTSVKRKTIYSLALRKFGKPVEAEDDSN 323


>XP_010254691.1 PREDICTED: uncharacterized protein LOC104595599 isoform X1 [Nelumbo
           nucifera] XP_010254692.1 PREDICTED: uncharacterized
           protein LOC104595599 isoform X1 [Nelumbo nucifera]
          Length = 371

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEEDKS 106
           AVKLV+ GTS +RKTIYSLALRKFGK  EAE+D +
Sbjct: 334 AVKLVSEGTSVKRKTIYSLALRKFGKPVEAEDDSN 368


>XP_015884956.1 PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           isoform X4 [Ziziphus jujuba] XP_015902592.1 PREDICTED:
           ribosomal RNA small subunit methyltransferase I-like
           isoform X4 [Ziziphus jujuba]
          Length = 325

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEED 100
           AVKLVA+GTS RRKTIYS+AL+KFGKQ  +E+D
Sbjct: 286 AVKLVASGTSARRKTIYSIALKKFGKQLGSEDD 318


>XP_012071940.1 PREDICTED: uncharacterized protein LOC105633854 [Jatropha curcas]
           KDP38563.1 hypothetical protein JCGZ_04488 [Jatropha
           curcas]
          Length = 355

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEE 97
           AVKLVA GTS +RKT+YSLALRKFGKQ EA++
Sbjct: 321 AVKLVAEGTSVKRKTVYSLALRKFGKQMEADD 352


>XP_015884952.1 PREDICTED: ribosomal RNA small subunit methyltransferase I-like
           isoform X1 [Ziziphus jujuba] XP_015884953.1 PREDICTED:
           ribosomal RNA small subunit methyltransferase I-like
           isoform X1 [Ziziphus jujuba] XP_015902588.1 PREDICTED:
           ribosomal RNA small subunit methyltransferase I-like
           isoform X1 [Ziziphus jujuba] XP_015902589.1 PREDICTED:
           ribosomal RNA small subunit methyltransferase I-like
           isoform X1 [Ziziphus jujuba]
          Length = 368

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 2   AVKLVAAGTSTRRKTIYSLALRKFGKQFEAEED 100
           AVKLVA+GTS RRKTIYS+AL+KFGKQ  +E+D
Sbjct: 329 AVKLVASGTSARRKTIYSIALKKFGKQLGSEDD 361


Top