BLASTX nr result

ID: Panax24_contig00020040 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00020040
         (365 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006848957.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti...    48   4e-06

>XP_006848957.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Amborella
           trichopoda] ERN10538.1 hypothetical protein
           AMTR_s00166p00060690 [Amborella trichopoda]
          Length = 326

 Score = 47.8 bits (112), Expect(2) = 4e-06
 Identities = 34/74 (45%), Positives = 41/74 (55%)
 Frame = -3

Query: 363 DVNGRQLIMNKASPKGYTAWTSSASGV*TC**NLCW*PSIGYGAEARLEQVFSGLGKVLN 184
           DVNGR L +NKA+P+G     SS   +     NL W        + RLEQVFS  GKV+ 
Sbjct: 215 DVNGRLLTVNKAAPRGSRIERSSEPSLRIYVGNLPWQVD-----DTRLEQVFSEHGKVVE 269

Query: 183 AQVVNDIELE*SRG 142
           A+VV D E   SRG
Sbjct: 270 ARVVYDRESGRSRG 283



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 142 FGFMAMSTKFKLNDASANLDVHIID 68
           FGF+ MST+ +LNDA A LD   +D
Sbjct: 284 FGFVTMSTETELNDAIAALDGQSLD 308


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