BLASTX nr result
ID: Panax24_contig00020040
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00020040 (365 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_006848957.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 48 4e-06 >XP_006848957.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Amborella trichopoda] ERN10538.1 hypothetical protein AMTR_s00166p00060690 [Amborella trichopoda] Length = 326 Score = 47.8 bits (112), Expect(2) = 4e-06 Identities = 34/74 (45%), Positives = 41/74 (55%) Frame = -3 Query: 363 DVNGRQLIMNKASPKGYTAWTSSASGV*TC**NLCW*PSIGYGAEARLEQVFSGLGKVLN 184 DVNGR L +NKA+P+G SS + NL W + RLEQVFS GKV+ Sbjct: 215 DVNGRLLTVNKAAPRGSRIERSSEPSLRIYVGNLPWQVD-----DTRLEQVFSEHGKVVE 269 Query: 183 AQVVNDIELE*SRG 142 A+VV D E SRG Sbjct: 270 ARVVYDRESGRSRG 283 Score = 30.0 bits (66), Expect(2) = 4e-06 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -2 Query: 142 FGFMAMSTKFKLNDASANLDVHIID 68 FGF+ MST+ +LNDA A LD +D Sbjct: 284 FGFVTMSTETELNDAIAALDGQSLD 308