BLASTX nr result

ID: Panax24_contig00019677 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00019677
         (612 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017215346.1 PREDICTED: calmodulin-binding protein 60 D [Daucu...    50   4e-12

>XP_017215346.1 PREDICTED: calmodulin-binding protein 60 D [Daucus carota subsp.
           sativus] KZM88193.1 hypothetical protein DCAR_025268
           [Daucus carota subsp. sativus]
          Length = 565

 Score = 50.4 bits (119), Expect(2) = 4e-12
 Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -1

Query: 612 SSLQAELLSSPSAGQQNVNKPAA-EDLLQMQLGSDHMTSSPPYTFGVDNGSELDVSL 445
           SSLQ E  +S SAGQQNV+     ED L M L   +MT+SPPYT  +DNG   +V L
Sbjct: 384 SSLQTETSNSYSAGQQNVDTSVVDEDQLPMLLNFGYMTTSPPYTSELDNGDLQEVIL 440



 Score = 48.1 bits (113), Expect(2) = 4e-12
 Identities = 30/63 (47%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = -2

Query: 440 GRSAAPSGSLGSVL-TGDLA-DDISQVEMSNKHGNGFFLSPSNQSVDIVSSNVGFRFSKI 267
           G   APS S GSVL +  LA  D    EM     N  F+ P+NQS+D VSS++GF  SK 
Sbjct: 469 GYGVAPSVSPGSVLASASLAYTDTFSAEMMKWPVNENFICPNNQSIDFVSSSIGFHVSKT 528

Query: 266 GKP 258
           G+P
Sbjct: 529 GRP 531


Top