BLASTX nr result

ID: Panax24_contig00019570 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00019570
         (444 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM85963.1 hypothetical protein DCAR_026615 [Daucus carota subsp...    97   1e-20
XP_017222949.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ...    97   1e-20
XP_006493055.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ...    59   2e-07
KDO42819.1 hypothetical protein CISIN_1g0016272mg, partial [Citr...    58   5e-07
XP_006420922.1 hypothetical protein CICLE_v10004226mg [Citrus cl...    58   6e-07
XP_015574073.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ...    56   2e-06
XP_011041898.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ...    54   1e-05
XP_011041897.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ...    54   1e-05
XP_011041895.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ...    54   1e-05

>KZM85963.1 hypothetical protein DCAR_026615 [Daucus carota subsp. sativus]
          Length = 999

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 65/148 (43%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
 Frame = +3

Query: 3    RDDQLSSSKDFPYYISSMNLSNGNNKKDLLDSSADRLVSSNGNIDGNQNCTFESNQTA-E 179
            +D  L S +  P  I S N  NGNNK+++LD+ +++L SSNG+IDG  N T ESNQ   E
Sbjct: 789  QDPLLCSGQLEPLPIGSKNHCNGNNKREVLDALSEKLTSSNGSIDGELNDTTESNQKCDE 848

Query: 180  *PPVASQLEEEKSEINDSPQKLTCNLESSNDSCSVNESGSTEYNTNNVLQRESQFLIXXX 359
              PV   LEEEK +I+ + QKLT N E+SNDS ++NES        +  Q +        
Sbjct: 849  HLPVDPLLEEEKYKISVALQKLTINGENSNDSFNINESVGAGCYPVSAQQSKLDSPPGER 908

Query: 360  XXXXXXXXXXXXXIKVKRDATKRILIDK 443
                         IKVKRDATKRILID+
Sbjct: 909  ESGSEDVEVDSESIKVKRDATKRILIDR 936


>XP_017222949.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Daucus
            carota subsp. sativus]
          Length = 1056

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 65/148 (43%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
 Frame = +3

Query: 3    RDDQLSSSKDFPYYISSMNLSNGNNKKDLLDSSADRLVSSNGNIDGNQNCTFESNQTA-E 179
            +D  L S +  P  I S N  NGNNK+++LD+ +++L SSNG+IDG  N T ESNQ   E
Sbjct: 789  QDPLLCSGQLEPLPIGSKNHCNGNNKREVLDALSEKLTSSNGSIDGELNDTTESNQKCDE 848

Query: 180  *PPVASQLEEEKSEINDSPQKLTCNLESSNDSCSVNESGSTEYNTNNVLQRESQFLIXXX 359
              PV   LEEEK +I+ + QKLT N E+SNDS ++NES        +  Q +        
Sbjct: 849  HLPVDPLLEEEKYKISVALQKLTINGENSNDSFNINESVGAGCYPVSAQQSKLDSPPGER 908

Query: 360  XXXXXXXXXXXXXIKVKRDATKRILIDK 443
                         IKVKRDATKRILID+
Sbjct: 909  ESGSEDVEVDSESIKVKRDATKRILIDR 936


>XP_006493055.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Citrus sinensis]
            XP_015380983.1 PREDICTED: ubiquitin carboxyl-terminal
            hydrolase 2 [Citrus sinensis]
          Length = 1046

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
 Frame = +3

Query: 57   NLSNGNNKKDL-LDSSADRLVSSNGNIDG-NQNCT-FESNQTAE*PPVASQLEEEKSEIN 227
            +L NG+ K +  L++  + LVS +G  D  NQ+C   ES  T +  P   Q E+ K +IN
Sbjct: 782  SLCNGDTKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKIN 841

Query: 228  DSPQ--------KLTCNLESSND----SCSVNESGSTEYNTNNVLQRESQFLIXXXXXXX 371
            D+ +        + +C+ ES  D    SCSV+ + S+ Y+   V Q +SQ +        
Sbjct: 842  DAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEE 901

Query: 372  XXXXXXXXXI-KVKRDATKRILIDK 443
                     I KVKRDATKR+LI+K
Sbjct: 902  SKVEEINSKIVKVKRDATKRVLINK 926


>KDO42819.1 hypothetical protein CISIN_1g0016272mg, partial [Citrus sinensis]
            KDO42820.1 hypothetical protein CISIN_1g0016272mg,
            partial [Citrus sinensis]
          Length = 964

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
 Frame = +3

Query: 57   NLSNGNNKKDL-LDSSADRLVSSNGNIDG-NQNCT-FESNQTAE*PPVASQLEEEKSEIN 227
            +L NG+ K +  L++  + LVS +G  D  NQ+C   ES  T +  P   Q E+ K +IN
Sbjct: 778  SLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKIN 837

Query: 228  DSPQ--------KLTCNLESSND----SCSVNESGSTEYNTNNVLQRESQFLIXXXXXXX 371
            D+ +        + +C+ ES  D    SCSV+ + S+ Y+   V Q +SQ +        
Sbjct: 838  DAVEMQSRSSCLRDSCSQESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEE 897

Query: 372  XXXXXXXXXI-KVKRDATKRILIDK 443
                     I KVKRDATKR+LI+K
Sbjct: 898  SKVEEINSKIVKVKRDATKRVLINK 922


>XP_006420922.1 hypothetical protein CICLE_v10004226mg [Citrus clementina]
            XP_006420923.1 hypothetical protein CICLE_v10004226mg
            [Citrus clementina] ESR34162.1 hypothetical protein
            CICLE_v10004226mg [Citrus clementina] ESR34163.1
            hypothetical protein CICLE_v10004226mg [Citrus
            clementina]
          Length = 1042

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 16/145 (11%)
 Frame = +3

Query: 57   NLSNGNNKKDL-LDSSADRLVSSNGNIDG-NQNCT-FESNQTAE*PPVASQLEEEKSEIN 227
            +L NG+ K +  L++  + LVS +G  D  NQ+C   ES  T +  P   Q E+ K +IN
Sbjct: 778  SLCNGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKIN 837

Query: 228  DSPQ--------KLTCNLESSND----SCSVNESGSTEYNTNNVLQRESQFLIXXXXXXX 371
            D+ +        + +C+ ES  D    SCSV+ + S+ Y+   V Q +SQ +        
Sbjct: 838  DAVEMQSRSLCLRDSCSEESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEE 897

Query: 372  XXXXXXXXXI-KVKRDATKRILIDK 443
                     I KVKRDATKR+LI+K
Sbjct: 898  SKVEEINSKIVKVKRDATKRVLINK 922


>XP_015574073.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform X1
            [Ricinus communis] EEF44219.1 conserved hypothetical
            protein [Ricinus communis]
          Length = 1006

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 54/156 (34%), Positives = 70/156 (44%), Gaps = 14/156 (8%)
 Frame = +3

Query: 18   SSSKDFPYYISSMNLSNGNNKKDLLDSSADRLVSSNGNIDG-NQN-CTFESNQTAE*PPV 191
            S  KD    I   + + G N     +SS   LVS + NID  NQN    ES QT E  P+
Sbjct: 733  SLEKDNLCSIEVKDHNGGINTDTCFNSSGASLVSDDENIDRTNQNYIKTESGQTDELNPI 792

Query: 192  ASQLEEEKSEIN--------DSPQKLTCNLESSN----DSCSVNESGSTEYNTNNVLQRE 335
             +Q +E+K E+          S    +C+ ES +     S SV E  ST Y T      +
Sbjct: 793  ETQGDEQKGEMTVALMEQSLSSSTYKSCSQESFSCPVVGSSSVGEPSSTGYATAKDQMGD 852

Query: 336  SQFLIXXXXXXXXXXXXXXXXIKVKRDATKRILIDK 443
            SQF                  +KVKRDATKR+L+DK
Sbjct: 853  SQF--SGNCGAKEDEEGTSRKVKVKRDATKRVLVDK 886


>XP_011041898.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform X3
            [Populus euphratica]
          Length = 927

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
 Frame = +3

Query: 3    RDDQLSSSKDFPYYISSMNLSNGNN-KKDLLDSSADRLVSSNGNIDGNQNCTFESNQTAE 179
            + D +S  KD  Y     N  NG+     LL+S+ +  V  +GN   N+N         E
Sbjct: 723  QSDSVSLYKDISYASEVRNFQNGDGIPNSLLNSTPE--VFDSGNDSSNKNFIQAEIVQTE 780

Query: 180  *PPVASQLEEEKSEINDSPQK---LTCNLESSN----DSCSVNESGSTEYNTNNVLQRES 338
              P  SQ EE K E+N S       +CN E+ +    DSCS +E+  T Y      Q  S
Sbjct: 781  MEPFISQSEERKYEMNVSHSSGYYESCNGETLSGPPVDSCSGDETSGTGYTMVKDEQTGS 840

Query: 339  QFLIXXXXXXXXXXXXXXXXIKVKRDATKRILIDK 443
             F                  + VKRDAT+R LI+K
Sbjct: 841  NFSGNCESDVNEDEDKTSKKLNVKRDATRRFLIEK 875


>XP_011041897.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform X2
            [Populus euphratica]
          Length = 997

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
 Frame = +3

Query: 3    RDDQLSSSKDFPYYISSMNLSNGNN-KKDLLDSSADRLVSSNGNIDGNQNCTFESNQTAE 179
            + D +S  KD  Y     N  NG+     LL+S+ +  V  +GN   N+N         E
Sbjct: 723  QSDSVSLYKDISYASEVRNFQNGDGIPNSLLNSTPE--VFDSGNDSSNKNFIQAEIVQTE 780

Query: 180  *PPVASQLEEEKSEINDSPQK---LTCNLESSN----DSCSVNESGSTEYNTNNVLQRES 338
              P  SQ EE K E+N S       +CN E+ +    DSCS +E+  T Y      Q  S
Sbjct: 781  MEPFISQSEERKYEMNVSHSSGYYESCNGETLSGPPVDSCSGDETSGTGYTMVKDEQTGS 840

Query: 339  QFLIXXXXXXXXXXXXXXXXIKVKRDATKRILIDK 443
             F                  + VKRDAT+R LI+K
Sbjct: 841  NFSGNCESDVNEDEDKTSKKLNVKRDATRRFLIEK 875


>XP_011041895.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform X1
            [Populus euphratica] XP_011041896.1 PREDICTED: ubiquitin
            carboxyl-terminal hydrolase 2-like isoform X1 [Populus
            euphratica]
          Length = 1000

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 49/155 (31%), Positives = 66/155 (42%), Gaps = 8/155 (5%)
 Frame = +3

Query: 3    RDDQLSSSKDFPYYISSMNLSNGNN-KKDLLDSSADRLVSSNGNIDGNQNCTFESNQTAE 179
            + D +S  KD  Y     N  NG+     LL+S+ +  V  +GN   N+N         E
Sbjct: 723  QSDSVSLYKDISYASEVRNFQNGDGIPNSLLNSTPE--VFDSGNDSSNKNFIQAEIVQTE 780

Query: 180  *PPVASQLEEEKSEINDSPQK---LTCNLESSN----DSCSVNESGSTEYNTNNVLQRES 338
              P  SQ EE K E+N S       +CN E+ +    DSCS +E+  T Y      Q  S
Sbjct: 781  MEPFISQSEERKYEMNVSHSSGYYESCNGETLSGPPVDSCSGDETSGTGYTMVKDEQTGS 840

Query: 339  QFLIXXXXXXXXXXXXXXXXIKVKRDATKRILIDK 443
             F                  + VKRDAT+R LI+K
Sbjct: 841  NFSGNCESDVNEDEDKTSKKLNVKRDATRRFLIEK 875


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