BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00019392
         (477 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019196450.1 PREDICTED: sm-like protein LSM1B [Ipomoea nil]          55   1e-06
XP_010322823.1 PREDICTED: sm-like protein LSM1B isoform X2 [Sola...    53   4e-06
XP_006357408.1 PREDICTED: sm-like protein LSM1B [Solanum tuberosum]    53   4e-06
XP_004241918.1 PREDICTED: sm-like protein LSM1B isoform X1 [Sola...    53   4e-06
KVH97911.1 hypothetical protein Ccrd_023870 [Cynara cardunculus ...    53   7e-06

>XP_019196450.1 PREDICTED: sm-like protein LSM1B [Ipomoea nil]
          Length = 128

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = -3

Query: 475 RAQKVEREATDLKGTMRKRMEFLDMD 398
           RAQKVEREATDLKGTMRKRMEFLDMD
Sbjct: 103 RAQKVEREATDLKGTMRKRMEFLDMD 128


>XP_010322823.1 PREDICTED: sm-like protein LSM1B isoform X2 [Solanum lycopersicum]
          Length = 119

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 475 RAQKVEREATDLKGTMRKRMEFLDMD 398
           RAQK EREATDLKGTMRKRMEFLDMD
Sbjct: 94  RAQKAEREATDLKGTMRKRMEFLDMD 119


>XP_006357408.1 PREDICTED: sm-like protein LSM1B [Solanum tuberosum]
          Length = 128

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 475 RAQKVEREATDLKGTMRKRMEFLDMD 398
           RAQK EREATDLKGTMRKRMEFLDMD
Sbjct: 103 RAQKAEREATDLKGTMRKRMEFLDMD 128


>XP_004241918.1 PREDICTED: sm-like protein LSM1B isoform X1 [Solanum lycopersicum]
           XP_015077670.1 PREDICTED: sm-like protein LSM1B [Solanum
           pennellii] XP_015077672.1 PREDICTED: sm-like protein
           LSM1B [Solanum pennellii]
          Length = 128

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -3

Query: 475 RAQKVEREATDLKGTMRKRMEFLDMD 398
           RAQK EREATDLKGTMRKRMEFLDMD
Sbjct: 103 RAQKAEREATDLKGTMRKRMEFLDMD 128


>KVH97911.1 hypothetical protein Ccrd_023870 [Cynara cardunculus var. scolymus]
          Length = 150

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = -3

Query: 475 RAQKVEREATDLKGTMRKRMEFLDMD 398
           RAQKVEREATDLKG+MRKRMEFLDMD
Sbjct: 125 RAQKVEREATDLKGSMRKRMEFLDMD 150