BLASTX nr result

ID: Panax24_contig00019149 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00019149
         (828 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017247376.1 PREDICTED: uncharacterized protein LOC108218783 [...   130   2e-30
KZM99013.1 hypothetical protein DCAR_013625 [Daucus carota subsp...    81   2e-13

>XP_017247376.1 PREDICTED: uncharacterized protein LOC108218783 [Daucus carota
           subsp. sativus]
          Length = 1223

 Score =  130 bits (327), Expect = 2e-30
 Identities = 109/281 (38%), Positives = 127/281 (45%), Gaps = 6/281 (2%)
 Frame = -2

Query: 827 ETKDISMPYKSPLPQYLNSRNRGKTEPNKIMLKKMRSIKLHKLCSLKQSETSQLNWLPXX 648
           E K   M YKSP+P+ LN  NR  TEP KIMLKK+RSIKL+KL  LK+  TSQL+W    
Sbjct: 24  EVKGKRMTYKSPVPRRLNGSNRASTEP-KIMLKKIRSIKLYKLYGLKRRGTSQLDWKSTD 82

Query: 647 XXXXXXXXXXXTPDRIKAISFSDGKKETFQXXXXXXXXXXXXSFYGSAATAPFSLNQNRG 468
                            +  FSDGKK   +            S  GS A+   SL+Q   
Sbjct: 83  S---------------SSNDFSDGKKY-IEVESGSEGESYSSSSGGSTASMTLSLHQK-- 124

Query: 467 INGGDERKRISKSNKHACPSCFRPFGRRPKSRLNNPSVELPNEVESEASPSHSA---GLK 297
                ERKR SKS KHACPSCFRPF +  K  L + S +   E  S+A P ++    G K
Sbjct: 125 -----ERKRESKSKKHACPSCFRPFDKDTKPILMDSSQQSLEE-GSDALPDYATPNKGPK 178

Query: 296 MQIQ---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQTLTKSSSMXXXXXXXXX 126
            Q+Q   +                                SLQTLTKSSS          
Sbjct: 179 KQVQSPPSTSDSSFFSNESSEPSVTGSHFSQSKSAASSKKSLQTLTKSSSTRTGGNLRKK 238

Query: 125 XXXXXXXXXXXXXXXXXQDLSLNRATCSSTLKDSKFPKQAE 3
                            QDL LNRATCSSTLKDSKFPKQ E
Sbjct: 239 TSFKIKGSLVGKPPNIVQDLGLNRATCSSTLKDSKFPKQVE 279


>KZM99013.1 hypothetical protein DCAR_013625 [Daucus carota subsp. sativus]
          Length = 1137

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 67/176 (38%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
 Frame = -2

Query: 512 GSAATAPFSLNQNRGINGGDERKRISKSNKHACPSCFRPFGRRPKSRLNNPSVELPNEVE 333
           GS A+   SL+Q        ERKR SKS KHACPSCFRPF +  K  L + S +   E  
Sbjct: 26  GSTASMTLSLHQK-------ERKRESKSKKHACPSCFRPFDKDTKPILMDSSQQSLEE-G 77

Query: 332 SEASPSHSA---GLKMQIQ---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQTL 171
           S+A P ++    G K Q+Q   +                                SLQTL
Sbjct: 78  SDALPDYATPNKGPKKQVQSPPSTSDSSFFSNESSEPSVTGSHFSQSKSAASSKKSLQTL 137

Query: 170 TKSSSMXXXXXXXXXXXXXXXXXXXXXXXXXXQDLSLNRATCSSTLKDSKFPKQAE 3
           TKSSS                           QDL LNRATCSSTLKDSKFPKQ E
Sbjct: 138 TKSSSTRTGGNLRKKTSFKIKGSLVGKPPNIVQDLGLNRATCSSTLKDSKFPKQVE 193


Top