BLASTX nr result

ID: Panax24_contig00018776 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00018776
         (579 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010271794.1 PREDICTED: rhomboid-like protein 20 isoform X3 [N...    56   5e-06
XP_010271793.1 PREDICTED: rhomboid-like protein 20 isoform X1 [N...    56   6e-06

>XP_010271794.1 PREDICTED: rhomboid-like protein 20 isoform X3 [Nelumbo nucifera]
          Length = 280

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 4/49 (8%)
 Frame = +3

Query: 3   SPTARTRNI----PSYVGRQVEQANHPAPVLSSMVEPPEDSIATLVSMG 137
           SP + +RNI    PS+VGRQVE+ N+PA + +S  EPPEDSIATLVSMG
Sbjct: 217 SPRSSSRNITGTAPSFVGRQVER-NYPATLHASTTEPPEDSIATLVSMG 264


>XP_010271793.1 PREDICTED: rhomboid-like protein 20 isoform X1 [Nelumbo nucifera]
           XP_019055069.1 PREDICTED: rhomboid-like protein 20
           isoform X2 [Nelumbo nucifera]
          Length = 294

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 4/49 (8%)
 Frame = +3

Query: 3   SPTARTRNI----PSYVGRQVEQANHPAPVLSSMVEPPEDSIATLVSMG 137
           SP + +RNI    PS+VGRQVE+ N+PA + +S  EPPEDSIATLVSMG
Sbjct: 217 SPRSSSRNITGTAPSFVGRQVER-NYPATLHASTTEPPEDSIATLVSMG 264


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