BLASTX nr result
ID: Panax24_contig00018390
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00018390
(430 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017234731.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 92 1e-19
XP_017232940.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 91 2e-19
CBI33876.3 unnamed protein product, partial [Vitis vinifera] 79 4e-15
XP_002279685.1 PREDICTED: RNA-binding protein CP29B, chloroplast... 79 5e-15
XP_015896880.1 PREDICTED: RNA-binding protein CP33, chloroplasti... 78 2e-14
CDP13040.1 unnamed protein product [Coffea canephora] 78 2e-14
EOY23976.1 RNA-binding family protein isoform 2 [Theobroma cacao] 77 2e-14
XP_017972776.1 PREDICTED: RNA-binding protein CP33, chloroplasti... 77 3e-14
EOY23975.1 RNA-binding family protein isoform 1 [Theobroma cacao] 77 3e-14
XP_016695737.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 76 7e-14
XP_011082360.1 PREDICTED: 29 kDa ribonucleoprotein, chloroplasti... 74 4e-13
KHG14110.1 33 kDa ribonucleoprotein, chloroplastic [Gossypium ar... 74 5e-13
XP_017617362.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 73 1e-12
XP_016708461.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 73 1e-12
KJB39829.1 hypothetical protein B456_007G032500 [Gossypium raimo... 72 3e-12
XP_012488859.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 72 3e-12
KDO39068.1 hypothetical protein CISIN_1g044184mg [Citrus sinensis] 72 3e-12
XP_015084950.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 71 5e-12
XP_004245902.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 71 5e-12
XP_012081829.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplasti... 71 5e-12
>XP_017234731.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Daucus
carota subsp. sativus] KZN07419.1 hypothetical protein
DCAR_008256 [Daucus carota subsp. sativus]
Length = 282
Score = 91.7 bits (226), Expect = 1e-19
Identities = 55/102 (53%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Frame = +2
Query: 137 RPKASPSTCLQFLPFIP----KFPLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXX 304
R +AS S LQ F P KFPLLSS+ HSRK RF+V T+V
Sbjct: 27 RQQASSSINLQVSTFTPTLSVKFPLLSSNKHSRK-SRFQVLTAVEEEIEVEKVEENVQLF 85
Query: 305 XRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKLFV NLPWS +VADIKN+FS+CG VID+EIIK K+GKS
Sbjct: 86 QKRKLFVYNLPWSLSVADIKNLFSECGTVIDIEIIK-KNGKS 126
>XP_017232940.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Daucus
carota subsp. sativus] KZN11638.1 hypothetical protein
DCAR_004294 [Daucus carota subsp. sativus]
Length = 282
Score = 91.3 bits (225), Expect = 2e-19
Identities = 55/103 (53%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Frame = +2
Query: 134 LRPKASPSTCLQFLPFIP----KFPLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXX 301
L PKAS S Q P+ P K PLLSS SRK RFEV T+V
Sbjct: 26 LSPKASSSINFQLSPYTPTLSLKTPLLSSFKISRK-SRFEVFTTVQEEVQVEEKAENVEI 84
Query: 302 XXRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKL+VLNLPWS TV DIK +F +CG V DVEIIKQKSGKS
Sbjct: 85 SQKRKLYVLNLPWSLTVTDIKKLFGECGIVTDVEIIKQKSGKS 127
>CBI33876.3 unnamed protein product, partial [Vitis vinifera]
Length = 258
Score = 79.3 bits (194), Expect = 4e-15
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 152 PSTCLQFLPFIPKFPL-LSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVL 328
PS CL++ P +PL L +N + K FE+C+SV +RKLFVL
Sbjct: 10 PSICLKY----PLYPLPLLYTNPTTKFS-FELCSSVQEIEVEAKPEQTQEPNQKRKLFVL 64
Query: 329 NLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
NLPWS +V DIKN+F +CG V DVEIIKQK G+S
Sbjct: 65 NLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRS 98
>XP_002279685.1 PREDICTED: RNA-binding protein CP29B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 79.3 bits (194), Expect = 5e-15
Identities = 45/94 (47%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 152 PSTCLQFLPFIPKFPL-LSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVL 328
PS CL++ P +PL L +N + K FE+C+SV +RKLFVL
Sbjct: 40 PSICLKY----PLYPLPLLYTNPTTKFS-FELCSSVQEIEVEAKPEQTQEPNQKRKLFVL 94
Query: 329 NLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
NLPWS +V DIKN+F +CG V DVEIIKQK G+S
Sbjct: 95 NLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRS 128
>XP_015896880.1 PREDICTED: RNA-binding protein CP33, chloroplastic [Ziziphus
jujuba]
Length = 282
Score = 77.8 bits (190), Expect = 2e-14
Identities = 42/86 (48%), Positives = 54/86 (62%)
Frame = +2
Query: 173 LPFIPKFPLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLNLPWSFTV 352
L F P P+ +S SRKL FE+C++V ++KLFV+NLPWS TV
Sbjct: 47 LLFHPSLPITNSP--SRKLC-FELCSAVQEIVTEEKSEKTQESNQKKKLFVVNLPWSLTV 103
Query: 353 ADIKNIFSKCGAVIDVEIIKQKSGKS 430
DIKN+F +CG V+DVEIIKQK G+S
Sbjct: 104 VDIKNLFGECGTVVDVEIIKQKGGRS 129
>CDP13040.1 unnamed protein product [Coffea canephora]
Length = 289
Score = 77.8 bits (190), Expect = 2e-14
Identities = 49/117 (41%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Frame = +2
Query: 140 PKASPSTCLQFL---------PFIPKFPLLSSSN-HSRKLRRFEVCTSVXXXXXXXXXXX 289
P SP L FL PF K PL HS + RF++C++
Sbjct: 19 PSTSPKCSLHFLKLPISTCALPFSSKRPLYPLPPLHSSRKPRFQICSTSTVEEVVTVEEK 78
Query: 290 XXXXXXR----------RKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+ RKLFVLNLPWSFTVADIKN+F++CG V DVEIIKQK GK+
Sbjct: 79 TEPTEEKAESAPQTNQKRKLFVLNLPWSFTVADIKNLFAECGTVTDVEIIKQKDGKN 135
>EOY23976.1 RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 248
Score = 77.0 bits (188), Expect = 2e-14
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = +2
Query: 200 LSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLNLPWSFTVADIKNIFSK 379
+SS +SRK F +C++V +RKLFVLNLPWS+TVADIK++F +
Sbjct: 51 ISSLTNSRKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQ 110
Query: 380 CGAVIDVEIIKQKSGKS 430
CG V DVEIIKQK G+S
Sbjct: 111 CGNVTDVEIIKQKDGRS 127
>XP_017972776.1 PREDICTED: RNA-binding protein CP33, chloroplastic [Theobroma
cacao]
Length = 281
Score = 77.0 bits (188), Expect = 3e-14
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = +2
Query: 200 LSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLNLPWSFTVADIKNIFSK 379
+SS +SRK F +C++V +RKLFVLNLPWS+TVADIK++F +
Sbjct: 51 ISSLTNSRKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQ 110
Query: 380 CGAVIDVEIIKQKSGKS 430
CG V DVEIIKQK G+S
Sbjct: 111 CGNVTDVEIIKQKDGRS 127
>EOY23975.1 RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 281
Score = 77.0 bits (188), Expect = 3e-14
Identities = 39/77 (50%), Positives = 50/77 (64%)
Frame = +2
Query: 200 LSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLNLPWSFTVADIKNIFSK 379
+SS +SRK F +C++V +RKLFVLNLPWS+TVADIK++F +
Sbjct: 51 ISSLTNSRKKPGFLLCSTVQEVNVEAETEKTQKSNVKRKLFVLNLPWSYTVADIKDLFGQ 110
Query: 380 CGAVIDVEIIKQKSGKS 430
CG V DVEIIKQK G+S
Sbjct: 111 CGNVTDVEIIKQKDGRS 127
>XP_016695737.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Gossypium
hirsutum]
Length = 286
Score = 76.3 bits (186), Expect = 7e-14
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Frame = +2
Query: 146 ASPSTCLQFLPFIPKFPLLSSSNHS-------RKLRRFEVCTSVXXXXXXXXXXXXXXXX 304
A PS IPK L S N S +K F++C+++
Sbjct: 27 AKPSRLSSLTSHIPKSTPLLSHNISISPLISTQKKLSFQLCSTLQEVSLEAETDKTQKSN 86
Query: 305 XRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKLFVLNLPWS+TVADIK++F +CG V DVEIIKQK G+S
Sbjct: 87 VKRKLFVLNLPWSYTVADIKDLFGQCGTVKDVEIIKQKDGRS 128
>XP_011082360.1 PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Sesamum
indicum]
Length = 297
Score = 74.3 bits (181), Expect = 4e-13
Identities = 43/93 (46%), Positives = 53/93 (56%)
Frame = +2
Query: 152 PSTCLQFLPFIPKFPLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLN 331
P+ L+F + P LS S H K F+ +S+ RRKLFVLN
Sbjct: 42 PAALLKFTQY--NLPFLSPS-HPIKCPGFQCHSSLESVTVEEEVEESGKPESRRKLFVLN 98
Query: 332 LPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
LPWSF+VADIK +F +CG V DVEIIKQK GK+
Sbjct: 99 LPWSFSVADIKKLFGECGTVADVEIIKQKDGKN 131
>KHG14110.1 33 kDa ribonucleoprotein, chloroplastic [Gossypium arboreum]
Length = 287
Score = 73.9 bits (180), Expect = 5e-13
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Frame = +2
Query: 146 ASPSTCLQFLPFIPKFPLLSSSNHS-------RKLRRFEVCTSVXXXXXXXXXXXXXXXX 304
A PS I K L S N S +K F++C+++
Sbjct: 28 AKPSRLSSLTSHISKSTPLLSHNFSISPLISTQKKLSFQLCSTLQEVSLEAETDKTQKSN 87
Query: 305 XRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKLFVLNLPWS+TVADIK++F +CG V DVEIIKQK G+S
Sbjct: 88 VKRKLFVLNLPWSYTVADIKDLFGQCGTVKDVEIIKQKDGRS 129
>XP_017617362.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Gossypium
arboreum]
Length = 287
Score = 73.2 bits (178), Expect = 1e-12
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Frame = +2
Query: 146 ASPSTCLQFLPFIPKFPLLSSSNHS-------RKLRRFEVCTSVXXXXXXXXXXXXXXXX 304
A PS I K L S N S +K F++C+++
Sbjct: 28 AKPSRLSSLTSHISKSTPLLSHNISISPLISTQKKLSFQLCSTLQEVSLEAETDKTQKSN 87
Query: 305 XRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKLFVLNLPWS+TVADIK++F +CG V DVEIIKQK G+S
Sbjct: 88 VKRKLFVLNLPWSYTVADIKDLFGQCGTVKDVEIIKQKDGRS 129
>XP_016708461.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Gossypium
hirsutum]
Length = 287
Score = 72.8 bits (177), Expect = 1e-12
Identities = 37/79 (46%), Positives = 51/79 (64%)
Frame = +2
Query: 194 PLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLNLPWSFTVADIKNIF 373
PL+S+ +K F++C+++ +RKLFVLNLPWS+TVADIK++F
Sbjct: 55 PLIST----QKKLSFQLCSTLQEVSLEAETDKTQKSNVKRKLFVLNLPWSYTVADIKDLF 110
Query: 374 SKCGAVIDVEIIKQKSGKS 430
+CG V DVEIIKQK G+S
Sbjct: 111 GQCGTVKDVEIIKQKDGRS 129
>KJB39829.1 hypothetical protein B456_007G032500 [Gossypium raimondii]
Length = 286
Score = 72.0 bits (175), Expect = 3e-12
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Frame = +2
Query: 146 ASPSTCLQFLPFIPKFPLLSSSNHS-------RKLRRFEVCTSVXXXXXXXXXXXXXXXX 304
A PS IPK L S N S +K F++ +++
Sbjct: 27 AKPSRLSSLTSHIPKSTPLLSHNISISPLISTQKKLSFQLWSTLQEVSLEAETDKTQKSN 86
Query: 305 XRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKLFVLNLPWS+TVADIK++F +CG V DVEIIKQK G+S
Sbjct: 87 VKRKLFVLNLPWSYTVADIKDLFGQCGTVKDVEIIKQKDGRS 128
>XP_012488859.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Gossypium
raimondii] KJB39828.1 hypothetical protein
B456_007G032500 [Gossypium raimondii]
Length = 286
Score = 72.0 bits (175), Expect = 3e-12
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Frame = +2
Query: 146 ASPSTCLQFLPFIPKFPLLSSSNHS-------RKLRRFEVCTSVXXXXXXXXXXXXXXXX 304
A PS IPK L S N S +K F++ +++
Sbjct: 27 AKPSRLSSLTSHIPKSTPLLSHNISISPLISTQKKLSFQLWSTLQEVSLEAETDKTQKSN 86
Query: 305 XRRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+RKLFVLNLPWS+TVADIK++F +CG V DVEIIKQK G+S
Sbjct: 87 VKRKLFVLNLPWSYTVADIKDLFGQCGTVKDVEIIKQKDGRS 128
>KDO39068.1 hypothetical protein CISIN_1g044184mg [Citrus sinensis]
Length = 275
Score = 71.6 bits (174), Expect = 3e-12
Identities = 38/90 (42%), Positives = 53/90 (58%)
Frame = +2
Query: 161 CLQFLPFIPKFPLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKLFVLNLPW 340
C++ L P LS + +R L +VC+++ RRKL+V NLPW
Sbjct: 30 CIKLLHSSNSTPSLSYNFPTRNLC-LQVCSTLQDTTVETKPEQTQKQNIRRKLYVFNLPW 88
Query: 341 SFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
SF+VA+IKN+F+ CG V+DVEIIK K GK+
Sbjct: 89 SFSVAEIKNLFAPCGTVVDVEIIKHKGGKN 118
>XP_015084950.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum
pennellii]
Length = 285
Score = 71.2 bits (173), Expect = 5e-12
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 308 RRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
RRKLFVLNLPWS TVADIKNIF++CG V DVEIIK K GKS
Sbjct: 89 RRKLFVLNLPWSLTVADIKNIFAECGIVDDVEIIKTKDGKS 129
>XP_004245902.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum
lycopersicum]
Length = 285
Score = 71.2 bits (173), Expect = 5e-12
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +2
Query: 308 RRKLFVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
RRKLFVLNLPWS TVADIKNIF++CG V DVEIIK K GKS
Sbjct: 89 RRKLFVLNLPWSLTVADIKNIFAECGIVDDVEIIKTKDGKS 129
>XP_012081829.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X1
[Jatropha curcas] XP_012081830.1 PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic isoform X2 [Jatropha
curcas] KDP29602.1 hypothetical protein JCGZ_19129
[Jatropha curcas]
Length = 287
Score = 71.2 bits (173), Expect = 5e-12
Identities = 40/97 (41%), Positives = 53/97 (54%)
Frame = +2
Query: 140 PKASPSTCLQFLPFIPKFPLLSSSNHSRKLRRFEVCTSVXXXXXXXXXXXXXXXXXRRKL 319
P +P C F P FPL +S +RKL T+ +RKL
Sbjct: 38 PCFTPLVCRNF----PLFPLTNSHLTTRKLSFKRCSTTQELTAETELQQTQEETVQKRKL 93
Query: 320 FVLNLPWSFTVADIKNIFSKCGAVIDVEIIKQKSGKS 430
+V+NLPWS +VADIK +F +CG V DVE+IKQK+G+S
Sbjct: 94 YVVNLPWSLSVADIKILFGQCGTVTDVEVIKQKNGRS 130