BLASTX nr result

ID: Panax24_contig00018238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00018238
         (896 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010263320.1 PREDICTED: TMV resistance protein N-like [Nelumbo...    66   2e-08
XP_019054002.1 PREDICTED: TMV resistance protein N-like [Nelumbo...    62   5e-07
XP_010256316.1 PREDICTED: TMV resistance protein N-like [Nelumbo...    60   3e-06

>XP_010263320.1 PREDICTED: TMV resistance protein N-like [Nelumbo nucifera]
          Length = 1151

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
 Frame = +1

Query: 61   NNFANNFRKNLLQSYQGRPEIPGMNISLSETEAPNWCNYQSMGXXXXXXXXXXXXRKLKG 240
            N+  N FRK LLQ   G       ++ L  +E P W  +Q++G             K++G
Sbjct: 992  NSLENTFRKYLLQGPSGN-----FDVFLPGSEVPEWFGHQNVGSSVSFEVPSILDHKIQG 1046

Query: 241  WIMCLVTSGGREDHVIC-----VIKNMTK----DTNCHLSTKIT--GCMWLSYVALSEHG 387
              +C V +    D  +      +I N T     D     +  +T    MWL  +  +E G
Sbjct: 1047 LSVCAVYASDEADTSLITSPCTIITNKTTGFQWDYRPGATVPVTHQDHMWLGLIPHNEFG 1106

Query: 388  VLVEGGD--ELEISFSTNKRVKKCGVSLIFEGDEEDPERDDQLII 516
              ++ GD  E+E+  S   RVKKCGV L++E +E+ P+  +Q  I
Sbjct: 1107 DQLDCGDQMEIEVEMSQPLRVKKCGVQLVYESNEKGPQSKNQPFI 1151


>XP_019054002.1 PREDICTED: TMV resistance protein N-like [Nelumbo nucifera]
          Length = 1170

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
 Frame = +1

Query: 61   NNFANNFRKNLLQSYQGRPEIPGMNISLSETEAPNWCNYQSMGXXXXXXXXXXXXRKLKG 240
            N+ +N F+  LL   Q R +    +I L   E P+W ++Q MG            RK++G
Sbjct: 947  NSLSNTFKNTLLPVLQERGKF---DIFLYGNEVPDWFDHQKMGSVISFEVPTLLDRKIQG 1003

Query: 241  WIMCLVTSGGREDHVICV-----IKNMTKDTNCHLSTKITGC--------MWLSYVALSE 381
              +C + +  R+           I + TK      S K            MW+ +   S+
Sbjct: 1004 LTICAIFATERKADEFAFLAYAKISDKTKGLEWRYSPKFHQVPKITHQPHMWVGHRRHSK 1063

Query: 382  HGVLVEGGDELEISFSTNK-----RVKKCGVSLIFEGDEEDPERDDQLI 513
             G  +E GD++E+S  T+       VKKCGV L++E ++ + + D Q +
Sbjct: 1064 FGNCLESGDQVEVSIETHSIKTALLVKKCGVHLVYEPNDMESQTDGQAL 1112


>XP_010256316.1 PREDICTED: TMV resistance protein N-like [Nelumbo nucifera]
          Length = 1181

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
 Frame = +1

Query: 79   FRKNLLQSYQG-RPEIPGMNISLSETEAPNWCNYQSMGXXXXXXXXXXXXRKLKGWIMCL 255
            F K+ L   QG + E  G N  L+ +E P+W   +++G             K++G  +C 
Sbjct: 982  FMKSFLNLLQGAKDECSGFNAILAGSEVPDWFTCRTLGSEVSFEVPLVLGCKVRGLTLCA 1041

Query: 256  VTSGGREDHVICV-----IKNMTK-------DTNCHLSTKITGCMWLSYVALSEHGVLVE 399
            V +G  E  +  +     I N+TK        +  H        MW+ + A  + G  +E
Sbjct: 1042 VYAGYDETCIFSIAHYAYIINITKGVHWLLMGSQIHGKNSCKNNMWVRHRAHPDMGKWLE 1101

Query: 400  GGDELEISFSTNK--RVKKCGVSLIFEGDEEDPERDDQLIIE 519
            GGD++ +     +  +VK CGV L+++ D+E  +R + +I+E
Sbjct: 1102 GGDQVRVMVHATEAHKVKMCGVHLVYKPDDE--KRSNVVIVE 1141


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