BLASTX nr result
ID: Panax24_contig00017581
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00017581
(3345 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK29467.1 polyprotein-like [Solanum chilense] 182 6e-43
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t... 181 2e-42
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 179 5e-42
OMO59210.1 Integrase, catalytic core [Corchorus capsularis] 173 1e-40
XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [... 169 6e-39
KYP65787.1 Retrovirus-related Pol polyprotein from transposon TN... 144 3e-35
KYP47622.1 Retrovirus-related Pol polyprotein from transposon TN... 141 9e-35
KOM57411.1 hypothetical protein LR48_Vigan11g044400 [Vigna angul... 137 1e-33
JAU79295.1 Retrovirus-related Pol polyprotein from transposon TN... 143 3e-33
KYP59118.1 Retrovirus-related Pol polyprotein from transposon TN... 137 3e-32
BAA11674.1 unnamed protein product [Nicotiana tabacum] 146 9e-32
CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera] 145 2e-31
CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera] 144 3e-31
KYP31352.1 Retrovirus-related Pol polyprotein from transposon TN... 133 4e-31
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 143 8e-31
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera] 143 9e-31
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 143 9e-31
KYP42945.1 Retrovirus-related Pol polyprotein from transposon TN... 138 1e-30
CAN74178.1 hypothetical protein VITISV_029257 [Vitis vinifera] 138 5e-30
XP_012574906.1 PREDICTED: uncharacterized protein LOC105852768 [... 130 5e-30
>AAK29467.1 polyprotein-like [Solanum chilense]
Length = 1328
Score = 182 bits (462), Expect = 6e-43
Identities = 80/99 (80%), Positives = 95/99 (95%)
Frame = +2
Query: 3047 DYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRSP 3226
++GIRHE+TVPGTPQHNGVAERMNRTI+E+VR MLRMAKLPK+FWGEAVRTACYLINRSP
Sbjct: 567 NHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKTFWGEAVRTACYLINRSP 626
Query: 3227 SAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
S PL+F IPE++W+ K++SYS+L+VFGCKAFAH+PKEQR
Sbjct: 627 SVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQR 665
>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease CAA32025.1 unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 181 bits (458), Expect = 2e-42
Identities = 80/98 (81%), Positives = 94/98 (95%)
Frame = +2
Query: 3050 YGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRSPS 3229
+GIRHE+TVPGTPQHNGVAERMNRTI+E+VR MLRMAKLPKSFWGEAV+TACYLINRSPS
Sbjct: 567 HGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPS 626
Query: 3230 APLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
PL F+IPE++W+ K+VSYS+L+VFGC+AFAH+PKEQR
Sbjct: 627 VPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQR 664
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 179 bits (454), Expect = 5e-42
Identities = 79/98 (80%), Positives = 91/98 (92%)
Frame = +2
Query: 3050 YGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRSPS 3229
YGIRHE+TVPGTPQHNG+AERMNRTI+E+VRCMLRMAKLPK FWGEAV+TA YLINR PS
Sbjct: 560 YGIRHEKTVPGTPQHNGIAERMNRTIVEKVRCMLRMAKLPKPFWGEAVQTAVYLINRLPS 619
Query: 3230 APLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
PL F IPE++W+GK+VSYS+L+VFGCKAF H+PKEQR
Sbjct: 620 VPLGFDIPERVWAGKEVSYSHLKVFGCKAFMHVPKEQR 657
>OMO59210.1 Integrase, catalytic core [Corchorus capsularis]
Length = 855
Score = 173 bits (439), Expect = 1e-40
Identities = 78/98 (79%), Positives = 88/98 (89%)
Frame = +2
Query: 3050 YGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRSPS 3229
+GIRHE T PGTPQHNGVAERMNRTI+ERVRCMLRMAKLPK+FWGEAV+ ACYLINRSPS
Sbjct: 258 HGIRHELTEPGTPQHNGVAERMNRTIVERVRCMLRMAKLPKAFWGEAVKVACYLINRSPS 317
Query: 3230 APLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
APL F IP+K+W GKD SY++L+VFGCK F H+ KEQR
Sbjct: 318 APLGFDIPKKVWLGKDPSYAHLKVFGCKTFLHVLKEQR 355
>XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [Jatropha curcas]
Length = 1180
Score = 169 bits (428), Expect = 6e-39
Identities = 80/107 (74%), Positives = 90/107 (84%), Gaps = 4/107 (3%)
Frame = +2
Query: 3035 KHRRDY----GIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTA 3202
K RDY IRHE+TVPGTPQHNG+AERMN TIIERVR ML+MA LPK FWGEAV TA
Sbjct: 993 KQFRDYYSQHSIRHEKTVPGTPQHNGIAERMNHTIIERVRSMLKMANLPKPFWGEAVNTA 1052
Query: 3203 CYLINRSPSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
YLINR PSA LDF IPEK+W+G+++SYS+LRVFGCKAF H+PKEQR
Sbjct: 1053 VYLINRLPSALLDFDIPEKVWAGRNISYSHLRVFGCKAFMHVPKEQR 1099
>KYP65787.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 217
Score = 144 bits (362), Expect = 3e-35
Identities = 65/100 (65%), Positives = 83/100 (83%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
RD+GI+ E+TVP TPQHN VA+RMNRTI ++++CML AKLPK+FWGEA+RT LIN S
Sbjct: 102 RDHGIKLEKTVPKTPQHNRVAKRMNRTINDKIKCMLSHAKLPKAFWGEALRTVVDLINLS 161
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
PS PLD +P+++W GKDVSYS+LRVF KAF HIP+++R
Sbjct: 162 PSIPLDNDVPKRVWRGKDVSYSHLRVFSYKAFVHIPRDER 201
>KYP47622.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 190
Score = 141 bits (356), Expect = 9e-35
Identities = 62/100 (62%), Positives = 80/100 (80%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
+ GIRHE+T P TPQ NG+ ERMNRT++ER+RCML AKLPK FWGEA+ TA ++IN +
Sbjct: 75 KQQGIRHEKTPPKTPQLNGLVERMNRTLLERMRCMLSDAKLPKHFWGEALYTAVHVINLT 134
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P+ LD ++P+KIW GK+ SY YL VFGCKAF H+PK++R
Sbjct: 135 PTVILDSEVPDKIWFGKNASYDYLHVFGCKAFVHVPKDER 174
>KOM57411.1 hypothetical protein LR48_Vigan11g044400 [Vigna angularis]
Length = 179
Score = 137 bits (346), Expect = 1e-33
Identities = 63/99 (63%), Positives = 77/99 (77%)
Frame = +2
Query: 3047 DYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRSP 3226
++GIR E+TVP TPQHNGVAERMNRT+ ER + M + LPK FW EAV TA YLINRSP
Sbjct: 32 EHGIRMERTVPSTPQHNGVAERMNRTLTERAKSMRVQSGLPKQFWAEAVNTAAYLINRSP 91
Query: 3227 SAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
S PL+ +IPE++WSGK+V S+LRVFGC A+ HI + R
Sbjct: 92 SVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQVR 130
>JAU79295.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Noccaea caerulescens]
Length = 382
Score = 143 bits (360), Expect = 3e-33
Identities = 59/100 (59%), Positives = 85/100 (85%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
+++GIRH++T P TPQ NG+AERMNRTI+ER+RC++ + L ++FWGEA+ T +++N S
Sbjct: 26 KEHGIRHQKTPPKTPQLNGLAERMNRTIVERMRCLISQSGLAQTFWGEALSTVVHVLNLS 85
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
PSAPL+ +PE++W+GKDVSY +L+VFGCKAF HIPK++R
Sbjct: 86 PSAPLEGDVPERVWTGKDVSYGHLKVFGCKAFVHIPKDER 125
>KYP59118.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 277
Score = 137 bits (345), Expect = 3e-32
Identities = 64/109 (58%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Frame = +2
Query: 3020 YL*PLKHR-RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVR 3196
Y P +H RD+ I+ E+T+P T QHNGVAERMNRTI +++RCML AKLPK+FWG+ +R
Sbjct: 162 YRGPFEHYCRDHNIKLEKTIPKTLQHNGVAERMNRTINDKIRCMLSHAKLPKAFWGDVLR 221
Query: 3197 TACYLINRSPSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
LIN SP PLD + +++W GK+VSYS+LRVFGCKA HIPK++R
Sbjct: 222 IVVDLINLSPCVPLDNDVLKRVWRGKNVSYSHLRVFGCKALVHIPKDER 270
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 146 bits (368), Expect = 9e-32
Identities = 62/100 (62%), Positives = 82/100 (82%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
+++GIRH+ T P TPQ NG+AERMNRT+IER RC+L +KLPK+FWGEA+ TA Y++N S
Sbjct: 562 KEHGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHS 621
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P PL ++ PEKIW G+D+SY LRVFGCKA+ H+PK++R
Sbjct: 622 PCVPLQYKAPEKIWLGRDISYDQLRVFGCKAYVHVPKDER 661
>CAN74160.1 hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 145 bits (365), Expect = 2e-31
Identities = 59/100 (59%), Positives = 83/100 (83%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
R +GIRH++T P TPQ NG+AERMNRT++ERVRC+L ++LP+SFWGEA+ T +++N +
Sbjct: 429 RQHGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLT 488
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P PL+F +P++IWS ++SY +LRVFGCKAF HIPK++R
Sbjct: 489 PCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDER 528
>CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 144 bits (363), Expect = 3e-31
Identities = 59/100 (59%), Positives = 83/100 (83%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
R +GIRH++T P TPQ NG+AERMNRT++ERVRC+L ++LP+SFWGEA+ T +++N +
Sbjct: 445 RQHGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLT 504
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P PL+F +P++IWS ++SY +LRVFGCKAF HIPK++R
Sbjct: 505 PCVPLEFDVPDRIWSKNEISYDHLRVFGCKAFVHIPKDER 544
>KYP31352.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 259
Score = 133 bits (335), Expect = 4e-31
Identities = 62/100 (62%), Positives = 78/100 (78%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
+ GIRHE+T P TPQ N AERMNRT++ERVRCML AKLPK FWGEA+ TA ++IN +
Sbjct: 146 KQQGIRHEKTPPKTPQLN--AERMNRTLLERVRCMLSDAKLPKHFWGEALYTAVHVINLT 203
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P+ LD ++P+KIW GK+ SY YLRVF CK F H+PK++R
Sbjct: 204 PTFILDSEVPDKIWFGKNASYDYLRVFDCKTFVHVPKDER 243
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1314
Score = 143 bits (360), Expect = 8e-31
Identities = 69/109 (63%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Frame = +2
Query: 3020 YL*PLKHR-RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVR 3196
YL P ++ + +GIRHE+ P TPQ NGVAERMNRTI E+VR ML AK+PKSFWGEAV
Sbjct: 549 YLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHAKIPKSFWGEAVL 608
Query: 3197 TACYLINRSPSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
TA LIN SPS PL+ +IPE++WSGK Y +L+VFGC+AF HIPK++R
Sbjct: 609 TAADLINLSPSRPLNGEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDER 657
>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 143 bits (360), Expect = 9e-31
Identities = 58/100 (58%), Positives = 82/100 (82%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
R +G RH++T P TPQ NG+AERMNRT++ERVRC+L ++LP+SFWGEA+ T +++N +
Sbjct: 542 RQHGFRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNLT 601
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P PL+F +P++IWS ++SY +LRVFGCKAF HIPK++R
Sbjct: 602 PCVPLEFDVPDRIWSNNEISYDHLRVFGCKAFVHIPKDER 641
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 143 bits (360), Expect = 9e-31
Identities = 65/100 (65%), Positives = 80/100 (80%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
R YGIRH++T P PQ NG+AERMNRTI+ERVRCML AKLP SFW EAV TA ++IN S
Sbjct: 560 RRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLS 619
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P L ++P+K+W GKDVSY +LRVFGCKAF H+P+++R
Sbjct: 620 PVIALKNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDER 659
>KYP42945.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 497
Score = 138 bits (347), Expect = 1e-30
Identities = 61/100 (61%), Positives = 81/100 (81%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
+ +GI H++T P TPQ NG+AERMNRT++ERVRCML AKLPK FWGEA+ T ++IN +
Sbjct: 349 KKHGIAHKKTPPKTPQLNGLAERMNRTLLERVRCMLSDAKLPKHFWGEALYTVVHVINLT 408
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
P+ L+ ++PEKIW GK+ SY +LRVFGCKAF HIP+++R
Sbjct: 409 PTVILNSEVPEKIWFGKNASYDHLRVFGCKAFVHIPRDER 448
>CAN74178.1 hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 138 bits (347), Expect = 5e-30
Identities = 64/100 (64%), Positives = 79/100 (79%)
Frame = +2
Query: 3044 RDYGIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACYLINRS 3223
+ +GI E+TVP TPQ NGV ERMNRTI +R+RCML AKLPKSFWGEA+RT LIN S
Sbjct: 195 KSHGIXLEKTVPKTPQQNGVVERMNRTICDRIRCMLSHAKLPKSFWGEAMRTVVDLINLS 254
Query: 3224 PSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQR 3343
PS PL+ I E+IW+GK VS+ +LRVFGC+AF H+P++ R
Sbjct: 255 PSYPLEGDILERIWTGKFVSFEHLRVFGCRAFVHVPRDXR 294
>XP_012574906.1 PREDICTED: uncharacterized protein LOC105852768 [Cicer arietinum]
Length = 279
Score = 130 bits (328), Expect = 5e-30
Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 5/104 (4%)
Frame = +2
Query: 3044 RDY-----GIRHEQTVPGTPQHNGVAERMNRTIIERVRCMLRMAKLPKSFWGEAVRTACY 3208
RDY GI HE+T P TPQ NG++ERMN T++ERVRCML AKLPK +WGEA+ T +
Sbjct: 148 RDYESINLGISHEKTSPKTPQLNGLSERMNWTLVERVRCMLSEAKLPKHYWGEALYTTMH 207
Query: 3209 LINRSPSAPLDFQIPEKIWSGKDVSYSYLRVFGCKAFAHIPKEQ 3340
IN +P+ L+ ++P K+W GK+V Y +LRVFGCKAF H+PK++
Sbjct: 208 FINLTPTVILNSEVPNKVWFGKNVKYDHLRVFGCKAFVHVPKDE 251