BLASTX nr result
ID: Panax24_contig00017484
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00017484
(397 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM89877.1 hypothetical protein DCAR_022760 [Daucus carota subsp... 86 6e-17
XP_017257821.1 PREDICTED: helicase protein MOM1-like isoform X2 ... 86 6e-17
XP_017257820.1 PREDICTED: helicase protein MOM1-like isoform X1 ... 86 6e-17
KZN05231.1 hypothetical protein DCAR_006068 [Daucus carota subsp... 69 9e-12
XP_017231860.1 PREDICTED: uncharacterized protein LOC108206162 [... 69 4e-11
>KZM89877.1 hypothetical protein DCAR_022760 [Daucus carota subsp. sativus]
Length = 2037
Score = 85.9 bits (211), Expect = 6e-17
Identities = 52/126 (41%), Positives = 72/126 (57%)
Frame = +2
Query: 17 RLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQPASRL 196
R SP+TV+ S GQPA++ N A + Q P+++QQ T Q +R+
Sbjct: 1717 RPSPITVASSAGQPASSQQNTALRSQPASRLHLNTVSSMARQPSANQQNTTLSSQYGTRI 1776
Query: 197 YPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNTAVQLQPAPRVSP 376
PVT SS + QPA +Q + L QP P + + VSSSAGQPA +QN QP+ R+SP
Sbjct: 1777 LPVTASSDS-QPAATQLHTTLLTQPEPGNNFVPVSSSAGQPATYQQNNEPLSQPSARISP 1835
Query: 377 ISVSSS 394
IS++SS
Sbjct: 1836 ISLASS 1841
Score = 70.1 bits (170), Expect = 2e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +2
Query: 143 PASSQQTATPPLQPASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPA 322
P Q P A R P+TV+SS GQPA SQQN AL+ QP R+ +VSS A QP+
Sbjct: 1701 PGRGQHLNQLPQHTAPRPSPITVASSAGQPASSQQNTALRSQPASRLHLNTVSSMARQPS 1760
Query: 323 ASRQNTAVQLQPAPRVSPISVSSSA 397
A++QNT + Q R+ P++ SS +
Sbjct: 1761 ANQQNTTLSSQYGTRILPVTASSDS 1785
Score = 68.2 bits (165), Expect = 1e-10
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = +2
Query: 137 GLPASSQQTATPPLQPASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQ 316
G PASSQQ QPASRL+ TVSS QP+ +QQN L Q R+ P++ SS + Q
Sbjct: 1728 GQPASSQQNTALRSQPASRLHLNTVSSMARQPSANQQNTTLSSQYGTRILPVTASSDS-Q 1786
Query: 317 PAASRQNTAVQLQPAPRVSPISVSSSA 397
PAA++ +T + QP P + + VSSSA
Sbjct: 1787 PAATQLHTTLLTQPEPGNNFVPVSSSA 1813
>XP_017257821.1 PREDICTED: helicase protein MOM1-like isoform X2 [Daucus carota
subsp. sativus]
Length = 2247
Score = 85.9 bits (211), Expect = 6e-17
Identities = 52/126 (41%), Positives = 72/126 (57%)
Frame = +2
Query: 17 RLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQPASRL 196
R SP+TV+ S GQPA++ N A + Q P+++QQ T Q +R+
Sbjct: 1927 RPSPITVASSAGQPASSQQNTALRSQPASRLHLNTVSSMARQPSANQQNTTLSSQYGTRI 1986
Query: 197 YPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNTAVQLQPAPRVSP 376
PVT SS + QPA +Q + L QP P + + VSSSAGQPA +QN QP+ R+SP
Sbjct: 1987 LPVTASSDS-QPAATQLHTTLLTQPEPGNNFVPVSSSAGQPATYQQNNEPLSQPSARISP 2045
Query: 377 ISVSSS 394
IS++SS
Sbjct: 2046 ISLASS 2051
Score = 70.1 bits (170), Expect = 2e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +2
Query: 143 PASSQQTATPPLQPASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPA 322
P Q P A R P+TV+SS GQPA SQQN AL+ QP R+ +VSS A QP+
Sbjct: 1911 PGRGQHLNQLPQHTAPRPSPITVASSAGQPASSQQNTALRSQPASRLHLNTVSSMARQPS 1970
Query: 323 ASRQNTAVQLQPAPRVSPISVSSSA 397
A++QNT + Q R+ P++ SS +
Sbjct: 1971 ANQQNTTLSSQYGTRILPVTASSDS 1995
Score = 68.2 bits (165), Expect = 1e-10
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = +2
Query: 137 GLPASSQQTATPPLQPASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQ 316
G PASSQQ QPASRL+ TVSS QP+ +QQN L Q R+ P++ SS + Q
Sbjct: 1938 GQPASSQQNTALRSQPASRLHLNTVSSMARQPSANQQNTTLSSQYGTRILPVTASSDS-Q 1996
Query: 317 PAASRQNTAVQLQPAPRVSPISVSSSA 397
PAA++ +T + QP P + + VSSSA
Sbjct: 1997 PAATQLHTTLLTQPEPGNNFVPVSSSA 2023
>XP_017257820.1 PREDICTED: helicase protein MOM1-like isoform X1 [Daucus carota
subsp. sativus]
Length = 2296
Score = 85.9 bits (211), Expect = 6e-17
Identities = 52/126 (41%), Positives = 72/126 (57%)
Frame = +2
Query: 17 RLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQPASRL 196
R SP+TV+ S GQPA++ N A + Q P+++QQ T Q +R+
Sbjct: 1976 RPSPITVASSAGQPASSQQNTALRSQPASRLHLNTVSSMARQPSANQQNTTLSSQYGTRI 2035
Query: 197 YPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNTAVQLQPAPRVSP 376
PVT SS + QPA +Q + L QP P + + VSSSAGQPA +QN QP+ R+SP
Sbjct: 2036 LPVTASSDS-QPAATQLHTTLLTQPEPGNNFVPVSSSAGQPATYQQNNEPLSQPSARISP 2094
Query: 377 ISVSSS 394
IS++SS
Sbjct: 2095 ISLASS 2100
Score = 70.1 bits (170), Expect = 2e-11
Identities = 38/85 (44%), Positives = 51/85 (60%)
Frame = +2
Query: 143 PASSQQTATPPLQPASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPA 322
P Q P A R P+TV+SS GQPA SQQN AL+ QP R+ +VSS A QP+
Sbjct: 1960 PGRGQHLNQLPQHTAPRPSPITVASSAGQPASSQQNTALRSQPASRLHLNTVSSMARQPS 2019
Query: 323 ASRQNTAVQLQPAPRVSPISVSSSA 397
A++QNT + Q R+ P++ SS +
Sbjct: 2020 ANQQNTTLSSQYGTRILPVTASSDS 2044
Score = 68.2 bits (165), Expect = 1e-10
Identities = 41/87 (47%), Positives = 54/87 (62%)
Frame = +2
Query: 137 GLPASSQQTATPPLQPASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQ 316
G PASSQQ QPASRL+ TVSS QP+ +QQN L Q R+ P++ SS + Q
Sbjct: 1987 GQPASSQQNTALRSQPASRLHLNTVSSMARQPSANQQNTTLSSQYGTRILPVTASSDS-Q 2045
Query: 317 PAASRQNTAVQLQPAPRVSPISVSSSA 397
PAA++ +T + QP P + + VSSSA
Sbjct: 2046 PAATQLHTTLLTQPEPGNNFVPVSSSA 2072
>KZN05231.1 hypothetical protein DCAR_006068 [Daucus carota subsp. sativus]
Length = 228
Score = 69.3 bits (168), Expect = 9e-12
Identities = 51/127 (40%), Positives = 61/127 (48%)
Frame = +2
Query: 14 SRLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQPASR 193
S + +TV S GQPA N Q PA SQQ Q +R
Sbjct: 24 STSAAITVKSSAGQPAGCQRNTVLTSQPSSMVHLDNVTTTTCQPAVSQQNTVSLSQHGAR 83
Query: 194 LYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNTAVQLQPAPRVS 373
L PV SSS Q AV Q L +QP P + IS S SAGQPAA+ QN L P+ R+S
Sbjct: 84 LLPVA-SSSGSQLAVKQHCSTLPMQPGPGNNVISDSFSAGQPAANPQNITPLLHPSLRIS 142
Query: 374 PISVSSS 394
P++VS S
Sbjct: 143 PLAVSPS 149
Score = 55.8 bits (133), Expect = 9e-07
Identities = 38/112 (33%), Positives = 54/112 (48%)
Frame = +2
Query: 5 QPGSRLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQP 184
QP S + V+ +T QPA + N L G A Q +T P+QP
Sbjct: 50 QPSSMVHLDNVTTTTCQPAVSQQNTV-SLSQHGARLLPVASSSGSQLAVKQHCSTLPMQP 108
Query: 185 ASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNT 340
++ S S GQPA + QNI L P+ R+SP++VS S Q AA +++T
Sbjct: 109 GPGNNVISDSFSAGQPAANPQNITPLLHPSLRISPLAVSPSGVQSAAHQRST 160
>XP_017231860.1 PREDICTED: uncharacterized protein LOC108206162 [Daucus carota subsp.
sativus]
Length = 1808
Score = 69.3 bits (168), Expect = 4e-11
Identities = 51/127 (40%), Positives = 61/127 (48%)
Frame = +2
Query: 14 SRLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQPASR 193
S + +TV S GQPA N Q PA SQQ Q +R
Sbjct: 1604 STSAAITVKSSAGQPAGCQRNTVLTSQPSSMVHLDNVTTTTCQPAVSQQNTVSLSQHGAR 1663
Query: 194 LYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNTAVQLQPAPRVS 373
L PV SSS Q AV Q L +QP P + IS S SAGQPAA+ QN L P+ R+S
Sbjct: 1664 LLPVA-SSSGSQLAVKQHCSTLPMQPGPGNNVISDSFSAGQPAANPQNITPLLHPSLRIS 1722
Query: 374 PISVSSS 394
P++VS S
Sbjct: 1723 PLAVSPS 1729
Score = 55.8 bits (133), Expect = 2e-06
Identities = 38/112 (33%), Positives = 54/112 (48%)
Frame = +2
Query: 5 QPGSRLSPVTVSISTGQPAANLHNMAPQLQXXXXXXXXXXXXXGGLPASSQQTATPPLQP 184
QP S + V+ +T QPA + N L G A Q +T P+QP
Sbjct: 1630 QPSSMVHLDNVTTTTCQPAVSQQNTV-SLSQHGARLLPVASSSGSQLAVKQHCSTLPMQP 1688
Query: 185 ASRLYPVTVSSSTGQPAVSQQNIALQLQPTPRVSPISVSSSAGQPAASRQNT 340
++ S S GQPA + QNI L P+ R+SP++VS S Q AA +++T
Sbjct: 1689 GPGNNVISDSFSAGQPAANPQNITPLLHPSLRISPLAVSPSGVQSAAHQRST 1740