BLASTX nr result

ID: Panax24_contig00017284 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00017284
         (516 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017222735.1 PREDICTED: uncharacterized protein LOC108199439 [...    78   8e-14
XP_006355942.1 PREDICTED: uncharacterized protein LOC102605327 [...    62   3e-08
XP_009785898.1 PREDICTED: DNA ligase 1 [Nicotiana sylvestris]          59   3e-07
XP_019230861.1 PREDICTED: uncharacterized protein LOC109211742 [...    55   6e-06

>XP_017222735.1 PREDICTED: uncharacterized protein LOC108199439 [Daucus carota
           subsp. sativus] KZM86027.1 hypothetical protein
           DCAR_026551 [Daucus carota subsp. sativus]
          Length = 422

 Score = 78.2 bits (191), Expect = 8e-14
 Identities = 51/130 (39%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
 Frame = -1

Query: 387 MLSLGVRGVQSLPPGNNIPENPTSQSFLFPNRPYQAHRFFCSNRVTQLGFCTILGQIRNG 208
           ML+ G R +   P  N   E  +S    F  +    H  F SN++T  GFC +LG+IRNG
Sbjct: 1   MLATGARPL--FPLFNTAQETQSSNFSQFFTKFSPTHLSFHSNKLTHFGFCVVLGKIRNG 58

Query: 207 SCAFAVKSPRK-VSDII-LKMXXXXXXXXXXXXXXXXXXXXXXXXXDIVVPIRNMKIWLE 34
              FA KSPRK V+D++ ++                          D++VP+RNMK WLE
Sbjct: 59  LGPFAAKSPRKGVNDVLEIEGFDEDDDFEELDDDFDEEEGDFDEDEDMIVPMRNMKEWLE 118

Query: 33  NKPPGFGEGK 4
           NKP GFGEGK
Sbjct: 119 NKPLGFGEGK 128


>XP_006355942.1 PREDICTED: uncharacterized protein LOC102605327 [Solanum tuberosum]
          Length = 410

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
 Frame = -1

Query: 387 MLSLGVRGVQSLPPGNNIPENPTSQSFLFPNRPYQAHRFFCSNRVTQLGFCTILGQIRNG 208
           MLSLG     S P   +   +P SQ     ++  +   FF SN+VT L   +++GQ R G
Sbjct: 1   MLSLG-----SYPRQPHCCASPISQFIPLISKIPRTQLFFTSNKVTHLRIRSLIGQKRTG 55

Query: 207 SCAFAVKSPRKVSDIILKM---------XXXXXXXXXXXXXXXXXXXXXXXXXDIVVPIR 55
           SC FA K   K  + +++M                                  ++++P+R
Sbjct: 56  SCVFARKDEEKRGNGVVEMEEIEDFDDDYEDDDLDVDDFLEDKEDVDGDDDDDEVIIPLR 115

Query: 54  NMKIWLENKPPGFGEGKE 1
           NMK WLENKP GFG  KE
Sbjct: 116 NMKKWLENKPRGFGVDKE 133


>XP_009785898.1 PREDICTED: DNA ligase 1 [Nicotiana sylvestris]
          Length = 423

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
 Frame = -1

Query: 387 MLSLG--VRGVQSLPPGNNIPENPTSQSFLFPNRPYQAHRFFCSNRVTQLGFCTILGQIR 214
           MLSLG   R  Q     +N   +P SQ     ++  Q H FF SN VT L   ++  Q R
Sbjct: 1   MLSLGNFPRQTQCCATFSN---SPISQILPLYSKIPQTHLFFPSNTVTHLSIRSLPWQKR 57

Query: 213 NGSCAFAVKSPRKVSDIILKMXXXXXXXXXXXXXXXXXXXXXXXXXD------IVVPIRN 52
            G C FA++S  K  + +++M                         D      +++P+RN
Sbjct: 58  TGVCIFAIRSEEKSGNNVVEMENLDDDECDDDVDDLLVDEDDDVEGDDDDEDEVIIPLRN 117

Query: 51  MKIWLENKPPGFGEGK 4
           MK WLENKP GFG  K
Sbjct: 118 MKKWLENKPSGFGVDK 133


>XP_019230861.1 PREDICTED: uncharacterized protein LOC109211742 [Nicotiana
           attenuata] OIT29137.1 hypothetical protein A4A49_31759
           [Nicotiana attenuata]
          Length = 425

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
 Frame = -1

Query: 336 IPENPTSQSFLFPNRPYQAHRFFCSNRVTQLGFCTILGQIRNGSCAFAVKSPRKVSDIIL 157
           I  +P SQ     ++  Q   FF SN VT L   ++  Q R G C FA+K   K  + ++
Sbjct: 17  IKSSPISQILPLYSKIPQTQLFFPSNTVTHLSIRSLPWQKRTGVCIFAIKDEEKSGNNVV 76

Query: 156 KMXXXXXXXXXXXXXXXXXXXXXXXXXD--------IVVPIRNMKIWLENKPPGFGEGK 4
           +M                         +        +++P+RNMK WLENKP GFG  K
Sbjct: 77  EMENLDDDDEYEDDDVDDFLVDEDDDVEGDDDDDDEVIIPLRNMKKWLENKPSGFGVDK 135


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