BLASTX nr result
ID: Panax24_contig00017276
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00017276
(636 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EOY09047.1 Eukaryotic rpb5 RNA polymerase subunit family protein... 171 7e-51
ONH94979.1 hypothetical protein PRUPE_7G043600 [Prunus persica] 170 2e-50
XP_010922168.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 169 2e-50
KDO43676.1 hypothetical protein CISIN_1g026620mg [Citrus sinensis] 168 1e-49
ONH94978.1 hypothetical protein PRUPE_7G043600 [Prunus persica] 153 3e-43
XP_010659173.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 140 4e-37
XP_006442079.1 hypothetical protein CICLE_v10021999mg [Citrus cl... 137 9e-37
XP_003632734.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 133 3e-35
KVI03464.1 DNA-directed RNA polymerase, RPB5 subunit [Cynara car... 132 1e-34
CDP09516.1 unnamed protein product [Coffea canephora] 131 2e-34
CBI30093.3 unnamed protein product, partial [Vitis vinifera] 133 4e-34
ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-... 128 3e-33
XP_010247052.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 127 4e-33
XP_012085995.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 127 5e-33
XP_019077235.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 125 9e-33
GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterran... 126 1e-32
EMT29845.1 DNA-directed RNA polymerases I, II, and III subunit R... 125 4e-32
XP_019458974.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 124 4e-32
XP_010036349.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 122 9e-31
XP_006451217.1 hypothetical protein CICLE_v10009504mg [Citrus cl... 115 3e-29
>EOY09047.1 Eukaryotic rpb5 RNA polymerase subunit family protein isoform 2
[Theobroma cacao]
Length = 169
Score = 171 bits (433), Expect = 7e-51
Identities = 83/139 (59%), Positives = 111/139 (79%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
SHRY+L+RRT +EMLRDRGY V S IN SL EFR+++ +PD +RLR SA+ + PSK
Sbjct: 31 SHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEFRAIYGQSPDF-DRLRLSATHKTDPSK 89
Query: 182 KIADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQM 361
+I DLLVN+TKHVL PK ++LT +EKQKLL+K+++E KQ+PR+++ D IA+YYG E+GQ+
Sbjct: 90 RITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIEEKQLPRLLKKDAIARYYGYERGQV 149
Query: 362 VKVSYNGPQTGSLITYRCV 418
VKV Y+G T S +TYRCV
Sbjct: 150 VKVMYDGEITQSHVTYRCV 168
>ONH94979.1 hypothetical protein PRUPE_7G043600 [Prunus persica]
Length = 169
Score = 170 bits (430), Expect = 2e-50
Identities = 83/139 (59%), Positives = 107/139 (76%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
SHRY+L+RRT +EM+RDRGY V S I+ SL +FR++ PD+ ERLRFSA+ + PS
Sbjct: 31 SHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDV-ERLRFSATHRTDPSD 89
Query: 182 KIADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQM 361
+I DLLVN+TKHVL PK +LT +EKQKLLKK+N+E Q+PR+ D IA+YYGLEKGQ+
Sbjct: 90 RITDLLVNITKHVLKPKHHVLTEQEKQKLLKKYNIEENQLPRLSRKDAIAQYYGLEKGQV 149
Query: 362 VKVSYNGPQTGSLITYRCV 418
VKV+Y G T S +TYRC+
Sbjct: 150 VKVTYTGDITESHVTYRCI 168
>XP_010922168.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X3
[Elaeis guineensis]
Length = 158
Score = 169 bits (429), Expect = 2e-50
Identities = 85/140 (60%), Positives = 108/140 (77%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
S RYFLARRT +EMLRDRGY + IN +L EFRS + +PD RL S S +SQP+
Sbjct: 20 SCRYFLARRTVLEMLRDRGYPIPAEQINLTLDEFRSEYGESPDR-NRLSLSYSLSSQPNN 78
Query: 182 KIADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQM 361
KI +LLVN+TKHVL P+ ++LT EEKQKLLKK+NVE Q+PRM+E D IA+YYGL+KGQ+
Sbjct: 79 KITELLVNITKHVLKPRHDVLTEEEKQKLLKKYNVEDSQLPRMLETDAIARYYGLQKGQV 138
Query: 362 VKVSYNGPQTGSLITYRCVV 421
VKV+Y+G T S +TYRC++
Sbjct: 139 VKVTYDGELTRSHVTYRCIM 158
>KDO43676.1 hypothetical protein CISIN_1g026620mg [Citrus sinensis]
Length = 177
Score = 168 bits (426), Expect = 1e-49
Identities = 83/139 (59%), Positives = 112/139 (80%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
S RY+L+RRT +EML+DRGY VA S IN S+ +FR+++ PD+ +RLR S S S PSK
Sbjct: 39 SLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDV-DRLRISISHQSDPSK 97
Query: 182 KIADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQM 361
+I DLLVN+TKHVL PK ++LT +EK+KLLKK+++E KQ+PRM++ D IA+YYGLE+GQ+
Sbjct: 98 RITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDAIAQYYGLERGQV 157
Query: 362 VKVSYNGPQTGSLITYRCV 418
VKV+Y+G T S +TYRCV
Sbjct: 158 VKVTYSGEITESHVTYRCV 176
>ONH94978.1 hypothetical protein PRUPE_7G043600 [Prunus persica]
Length = 206
Score = 153 bits (386), Expect = 3e-43
Identities = 84/176 (47%), Positives = 108/176 (61%), Gaps = 37/176 (21%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
SHRY+L+RRT +EM+RDRGY V S I+ SL +FR++ PD+ ERLRFSA+ + PS
Sbjct: 31 SHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDFRALHGQNPDV-ERLRFSATHRTDPSD 89
Query: 182 KIA-------------------------------------DLLVNLTKHVLVPKLEILTA 250
+IA DLLVN+TKHVL PK +LT
Sbjct: 90 RIANKDTLNGLILITQNQITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTE 149
Query: 251 EEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVKVSYNGPQTGSLITYRCV 418
+EKQKLLKK+N+E Q+PR+ D IA+YYGLEKGQ+VKV+Y G T S +TYRC+
Sbjct: 150 QEKQKLLKKYNIEENQLPRLSRKDAIAQYYGLEKGQVVKVTYTGDITESHVTYRCI 205
>XP_010659173.1 PREDICTED: DNA-directed RNA polymerase V subunit 5C isoform X3
[Vitis vinifera]
Length = 311
Score = 140 bits (353), Expect = 4e-37
Identities = 79/175 (45%), Positives = 103/175 (58%), Gaps = 36/175 (20%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
S+RY+L+RRT +ML DRGY+V S + RSL++FR+ F PD RLR S PSK
Sbjct: 137 SYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDP-SRLRICLPLISSPSK 195
Query: 182 KI------------------------------------ADLLVNLTKHVLVPKLEILTAE 253
KI +LL+N+TKHV VPK EIL+A+
Sbjct: 196 KINREGLHRLILVLQSKMNSHARKVVDEYPIKVEFFQITELLINITKHVSVPKHEILSAQ 255
Query: 254 EKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVKVSYNGPQTGSLITYRCV 418
EK+KL+ K+ +E KQ P M + D IA+YYGLEKGQ+VK++Y G T SL+TYRCV
Sbjct: 256 EKRKLVNKYKLEDKQFPIMQKDDAIARYYGLEKGQVVKITYKGGMTDSLVTYRCV 310
>XP_006442079.1 hypothetical protein CICLE_v10021999mg [Citrus clementina]
XP_006492520.1 PREDICTED: DNA-directed RNA polymerase V
subunit 5A isoform X1 [Citrus sinensis] ESR55319.1
hypothetical protein CICLE_v10021999mg [Citrus
clementina] KDO43677.1 hypothetical protein
CISIN_1g026620mg [Citrus sinensis]
Length = 236
Score = 137 bits (345), Expect = 9e-37
Identities = 83/198 (41%), Positives = 113/198 (57%), Gaps = 59/198 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSAS------- 160
S RY+L+RRT +EML+DRGY VA S IN S+ +FR+++ PD+ +RLR S S
Sbjct: 39 SLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDV-DRLRISISHQSDPSK 97
Query: 161 ----------------------------------------FTSQPSK------------K 184
TSQ +K +
Sbjct: 98 RILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKAVGLFQFKVEMFQ 157
Query: 185 IADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMV 364
I DLLVN+TKHVL PK ++LT +EK+KLLKK+++E KQ+PRM++ D IA+YYGLE+GQ+V
Sbjct: 158 ITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQLPRMLKKDAIAQYYGLERGQVV 217
Query: 365 KVSYNGPQTGSLITYRCV 418
KV+Y+G T S +TYRCV
Sbjct: 218 KVTYSGEITESHVTYRCV 235
>XP_003632734.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1
[Vitis vinifera]
Length = 229
Score = 133 bits (334), Expect = 3e-35
Identities = 83/197 (42%), Positives = 104/197 (52%), Gaps = 58/197 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVF---------------------- 115
SHRY+LARRT +EMLRDRGY + I+ SL +FRS +
Sbjct: 32 SHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKK 91
Query: 116 ----------------------VVTPDLLERLRFSAS--FTSQPSK------------KI 187
+V D L +L TSQ K +I
Sbjct: 92 ILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQI 151
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DLLVN+TKHVL PK +LT +EK KLLKK+++ KQ+PRM++ D IA+YYGLEKGQ+VK
Sbjct: 152 TDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVK 211
Query: 368 VSYNGPQTGSLITYRCV 418
V YNG TGS +TYRCV
Sbjct: 212 VIYNGEITGSHVTYRCV 228
>KVI03464.1 DNA-directed RNA polymerase, RPB5 subunit [Cynara cardunculus var.
scolymus]
Length = 229
Score = 132 bits (331), Expect = 1e-34
Identities = 77/197 (39%), Positives = 107/197 (54%), Gaps = 58/197 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVF---------------------- 115
SHRY+L+RRT +EMLRDRGYD+++S I+ +L +FR +
Sbjct: 32 SHRYYLSRRTLLEMLRDRGYDISNSEIDLTLQQFRDLHGQATDVDRLRISASHVSDPHNK 91
Query: 116 ----------------------VVTPDLLERLRF--SASFTSQPSK------------KI 187
++ + L RL + T+Q K +I
Sbjct: 92 VLAVFCGTGAVKVNVIRWIATQIMNKETLSRLIIVVQSHITNQAMKAVDLFSFPVEIFQI 151
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DLLVN+TKHVL PK ++T EK+KLLKKFN+ KQ+PRM + D IA+YYGLEKGQ+++
Sbjct: 152 TDLLVNITKHVLKPKHRVITPVEKEKLLKKFNLNEKQLPRMSQKDAIAQYYGLEKGQVIE 211
Query: 368 VSYNGPQTGSLITYRCV 418
V+YNG TG +TYRC+
Sbjct: 212 VTYNGEITGLHVTYRCI 228
>CDP09516.1 unnamed protein product [Coffea canephora]
Length = 228
Score = 131 bits (329), Expect = 2e-34
Identities = 80/197 (40%), Positives = 107/197 (54%), Gaps = 58/197 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVF---------------------- 115
SHRY+L+RRT +EMLRDRG+ V +S I SL +FR+ +
Sbjct: 31 SHRYYLSRRTVLEMLRDRGFLVPNSEIGLSLQDFRNNYGQQPDIDRLRISALHKDDPSNK 90
Query: 116 ----------------------VVTPDLLERLRFSAS--FTSQPSK------------KI 187
++ D L RL TSQ K +I
Sbjct: 91 ILVLFCGPNVVKVNVIRGIANQIMNKDTLSRLILIVQNHITSQAMKAVDLLPFKVEIFQI 150
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DLLVN+TKHVL PK ++LT EEKQ+LL+K+N+E KQ+PRM++ D IA+YYGLEKGQ++K
Sbjct: 151 TDLLVNVTKHVLKPKHQLLTEEEKQRLLEKYNIEDKQLPRMLQKDAIARYYGLEKGQVLK 210
Query: 368 VSYNGPQTGSLITYRCV 418
V+YN T + +TYRCV
Sbjct: 211 VTYNNEITETHVTYRCV 227
>CBI30093.3 unnamed protein product, partial [Vitis vinifera]
Length = 330
Score = 133 bits (334), Expect = 4e-34
Identities = 83/197 (42%), Positives = 104/197 (52%), Gaps = 58/197 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVF---------------------- 115
SHRY+LARRT +EMLRDRGY + I+ SL +FRS +
Sbjct: 133 SHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSKK 192
Query: 116 ----------------------VVTPDLLERLRFSAS--FTSQPSK------------KI 187
+V D L +L TSQ K +I
Sbjct: 193 ILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQI 252
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DLLVN+TKHVL PK +LT +EK KLLKK+++ KQ+PRM++ D IA+YYGLEKGQ+VK
Sbjct: 253 TDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQLPRMLQQDAIARYYGLEKGQVVK 312
Query: 368 VSYNGPQTGSLITYRCV 418
V YNG TGS +TYRCV
Sbjct: 313 VIYNGEITGSHVTYRCV 329
>ABD28306.1 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal
[Medicago truncatula]
Length = 224
Score = 128 bits (321), Expect = 3e-33
Identities = 77/196 (39%), Positives = 101/196 (51%), Gaps = 58/196 (29%)
Frame = +2
Query: 8 RYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVF------------------------ 115
RYF R+T M+ML DRGY+V++S + SL+EFRS F
Sbjct: 29 RYFECRKTLMDMLHDRGYNVSESDLTLSLSEFRSRFGEFPKPHTLGVSVSLRSNPSIKVQ 88
Query: 116 ---------------VVTPDLLERLRFSASFTSQPSK-------------------KIAD 193
V+ ++++ R S SK ++ D
Sbjct: 89 VVFPGTDDIRKSNLIVIQSQIVDKERLSRLILVMQSKMTSYARKELENCPFKVEIIQLND 148
Query: 194 LLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVKVS 373
LLVN+TKHVL PK E+LTA EKQKLL K+ VE KQ+P M+ D IA YYGLEKGQ+VK+S
Sbjct: 149 LLVNVTKHVLQPKYEVLTANEKQKLLNKYKVEEKQLPHMLRTDAIASYYGLEKGQVVKIS 208
Query: 374 YNGPQTGSLITYRCVV 421
++G SL+ YRCVV
Sbjct: 209 HSGEMFNSLVMYRCVV 224
>XP_010247052.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 5B-like
[Nelumbo nucifera]
Length = 223
Score = 127 bits (320), Expect = 4e-33
Identities = 82/202 (40%), Positives = 108/202 (53%), Gaps = 62/202 (30%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
SHRY+LARRT +EMLRDRGYD+ DS I+ SL EFRS + PD LER+R SAS S PS+
Sbjct: 23 SHRYYLARRTVLEMLRDRGYDIPDSEIDCSLQEFRSTYGQKPD-LERIRVSASLLSDPSQ 81
Query: 182 KIADLL-----VNL-------------------TKHVLVPKLEILTAEEK---------- 259
KI + +N+ T+ +L+ + EIL K
Sbjct: 82 KILVVFCGTDKINVRIARGIRNQITGKEELSWPTRVILILQSEILPQARKEVEQFPCKVE 141
Query: 260 ----------------------------QKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKG 355
+K+L K+++E KQ+PRM++ D IA+YYGLEKG
Sbjct: 142 FFQITDLLINITKHVLKPKHEILTPEEKEKILNKYSLEDKQMPRMLQSDAIARYYGLEKG 201
Query: 356 QMVKVSYNGPQTGSLITYRCVV 421
Q+VKV Y+G TGS +TYRCVV
Sbjct: 202 QVVKVIYSGEITGSHVTYRCVV 223
>XP_012085995.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Jatropha
curcas] KDP26240.1 hypothetical protein JCGZ_22486
[Jatropha curcas]
Length = 238
Score = 127 bits (320), Expect = 5e-33
Identities = 80/197 (40%), Positives = 105/197 (53%), Gaps = 58/197 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFR------------------------- 106
S RY+L+RRT +EML+DRGY + IN SL EFR
Sbjct: 41 SCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLKISAIHKSNPNKR 100
Query: 107 --------------SVFVVTPDLLER-------LRFSASFTSQPSK------------KI 187
SV V+ ++ + L T+Q K +I
Sbjct: 101 MLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAMDLFKFKVEMFQI 160
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DLLVN+TKHVL PK E+LT EKQKLLKK+++E KQ+PR+++ D IA+YYGLEKGQ+VK
Sbjct: 161 TDLLVNITKHVLKPKHEVLTEREKQKLLKKYSIEEKQLPRLLKKDAIARYYGLEKGQVVK 220
Query: 368 VSYNGPQTGSLITYRCV 418
V+Y+G T S +TYRCV
Sbjct: 221 VTYSGDITESHVTYRCV 237
>XP_019077235.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X2
[Vitis vinifera]
Length = 191
Score = 125 bits (315), Expect = 9e-33
Identities = 78/160 (48%), Positives = 97/160 (60%), Gaps = 21/160 (13%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
SHRY+LARRT +EMLRDRGY + I+ SL +FRS + PD +RLR SA+ S PSK
Sbjct: 32 SHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDP-DRLRISAALRSDPSK 90
Query: 182 KI------------------ADLLVN---LTKHVLVPKLEILTAEEKQKLLKKFNVEAKQ 298
KI A +VN L+K +LV + I + K L F VE Q
Sbjct: 91 KILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAVDLFSFQVEKFQ 150
Query: 299 IPRMMEVDPIAKYYGLEKGQMVKVSYNGPQTGSLITYRCV 418
+PRM++ D IA+YYGLEKGQ+VKV YNG TGS +TYRCV
Sbjct: 151 LPRMLQQDAIARYYGLEKGQVVKVIYNGEITGSHVTYRCV 190
>GAU39304.1 hypothetical protein TSUD_119090 [Trifolium subterraneum]
Length = 223
Score = 126 bits (317), Expect = 1e-32
Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 58/198 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRS------------------------ 109
S RYF RRT MEML DRGY+V++S + +L +FRS
Sbjct: 26 SIRYFECRRTLMEMLYDRGYNVSESDLTLTLFDFRSKFGEFPKTETLGVCVSHRSNPSNK 85
Query: 110 ---VFVVTPDLLERL------------RFSASFTSQPSKKIA------------------ 190
VF T D+ +R R S SK A
Sbjct: 86 IQVVFAGTDDIRKRTLTEIYSQIVDKERLSRLILVVQSKMTAYARKEFENCPYKVEIINL 145
Query: 191 -DLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DL+VN+TKHVL PK E+LTA+EKQ+LL+K+ VEAKQ+P M++ D IA Y+GLEKGQ+VK
Sbjct: 146 NDLVVNVTKHVLQPKYEVLTADEKQQLLQKYKVEAKQLPHMLKTDAIASYFGLEKGQVVK 205
Query: 368 VSYNGPQTGSLITYRCVV 421
+S++G S++TYRCVV
Sbjct: 206 ISHSGEMFNSMVTYRCVV 223
>EMT29845.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Aegilops tauschii]
Length = 238
Score = 125 bits (314), Expect = 4e-32
Identities = 69/149 (46%), Positives = 91/149 (61%), Gaps = 23/149 (15%)
Frame = +2
Query: 41 MLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSKK------------ 184
MLRDRGY V + + R+L EFR+ + TP++ ERL FS + S S K
Sbjct: 1 MLRDRGYSVPEDELARTLPEFRAWWSETPEI-ERLSFSTTLASDESNKSKITSRARESIK 59
Query: 185 -----------IADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIA 331
I +LLVN+TKHVL PK E+LTAEEK KLLK++NV Q+PRM+E D +A
Sbjct: 60 EMFKFKVDVFQITELLVNITKHVLKPKHEVLTAEEKAKLLKQYNVVDSQLPRMLETDAVA 119
Query: 332 KYYGLEKGQMVKVSYNGPQTGSLITYRCV 418
+YYGL KG +VK +Y+ T +TYRC+
Sbjct: 120 RYYGLGKGTVVKFTYDSELTVDHVTYRCI 148
>XP_019458974.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A-like isoform X2
[Lupinus angustifolius]
Length = 200
Score = 124 bits (311), Expect = 4e-32
Identities = 72/160 (45%), Positives = 100/160 (62%), Gaps = 21/160 (13%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSK 181
SHRY+L+RRTA+EML+DRGY V S I+ SL++FR++ +PD+ RLRFSA+ S PSK
Sbjct: 41 SHRYYLSRRTALEMLKDRGYSVPSSEIDISLSQFRAIHGQSPDI-HRLRFSATHNSDPSK 99
Query: 182 KI------------------ADLLVN---LTKHVLVPKLEILTAEEKQKLLKKFNVEAKQ 298
+I A +VN LT +L+ + +I K + F VE Q
Sbjct: 100 RILVIYCGPGVVKVNVIRNIAGQIVNRETLTGLILIVQDQITAQALKAVKIFSFKVEIFQ 159
Query: 299 IPRMMEVDPIAKYYGLEKGQMVKVSYNGPQTGSLITYRCV 418
+PRM++ D I+KYYGLE+GQ+VKV+Y+G T +TYRCV
Sbjct: 160 LPRMLQTDAISKYYGLERGQVVKVTYSGEITEMHVTYRCV 199
>XP_010036349.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Eucalyptus
grandis] KCW47892.1 hypothetical protein EUGRSUZ_K01636
[Eucalyptus grandis]
Length = 238
Score = 122 bits (305), Expect = 9e-31
Identities = 78/197 (39%), Positives = 105/197 (53%), Gaps = 58/197 (29%)
Frame = +2
Query: 2 SHRYFLARRTAMEMLRDRGY----------------------DVADSHINRSLAEFRSVF 115
SHRY+LARRT +EMLRDRGY D+ I+ SL S
Sbjct: 41 SHRYYLARRTLLEMLRDRGYAIPSSDIDVSLAEFRATHGQSPDIDRLRISNSLRSDPSKR 100
Query: 116 VVT------PDLLERLRF------------------SASFTSQPSK------------KI 187
V+ P + +R+ T+Q K +I
Sbjct: 101 VLVYFCNPGPVKVTSIRYISGQIANKDGLSGLILVLQGEMTNQALKALDLFPFKVQVFQI 160
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
DLLVN+TKHVL PK +LT +EKQ+LLKK++++ KQ+PRM++ D IA+YYGLEKGQ+VK
Sbjct: 161 TDLLVNITKHVLKPKHRVLTDQEKQRLLKKYSIQEKQLPRMLKNDAIARYYGLEKGQVVK 220
Query: 368 VSYNGPQTGSLITYRCV 418
V+Y+G TG+ +TYRCV
Sbjct: 221 VTYSGDITGTHVTYRCV 237
>XP_006451217.1 hypothetical protein CICLE_v10009504mg [Citrus clementina]
ESR64457.1 hypothetical protein CICLE_v10009504mg
[Citrus clementina]
Length = 146
Score = 115 bits (288), Expect = 3e-29
Identities = 63/138 (45%), Positives = 88/138 (63%)
Frame = +2
Query: 8 RYFLARRTAMEMLRDRGYDVADSHINRSLAEFRSVFVVTPDLLERLRFSASFTSQPSKKI 187
R F RRT M+MLRDRGY V D IN S +F + F E L + + + S +
Sbjct: 10 RLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKR-EDLVINKALRNDSSDQE 68
Query: 188 ADLLVNLTKHVLVPKLEILTAEEKQKLLKKFNVEAKQIPRMMEVDPIAKYYGLEKGQMVK 367
A+LLVN+ +HVLVP+ ++LT EEK+ LLK++ V+ Q+PR+ DPIA+YYGL++GQ+VK
Sbjct: 69 AELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKRGQVVK 128
Query: 368 VSYNGPQTGSLITYRCVV 421
+ G +TYR VV
Sbjct: 129 IIRPSETAGRYVTYRYVV 146