BLASTX nr result

ID: Panax24_contig00017272 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00017272
         (402 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012843243.1 PREDICTED: ribosome maturation protein SBDS [Eryt...   168   1e-48
XP_009384217.1 PREDICTED: ribosome maturation protein SBDS [Musa...   166   7e-48
XP_010270397.1 PREDICTED: ribosome maturation protein SBDS [Nelu...   164   3e-47
XP_006858396.1 PREDICTED: ribosome maturation protein SBDS [Ambo...   164   3e-47
XP_019247548.1 PREDICTED: ribosome maturation protein SBDS [Nico...   164   4e-47
XP_016439581.1 PREDICTED: ribosome maturation protein SBDS-like ...   164   4e-47
XP_009777273.1 PREDICTED: ribosome maturation protein SBDS [Nico...   164   4e-47
XP_009625483.1 PREDICTED: ribosome maturation protein SBDS [Nico...   164   4e-47
CDP11993.1 unnamed protein product [Coffea canephora]                 164   5e-47
XP_010932822.1 PREDICTED: ribosome maturation protein SBDS [Elae...   163   1e-46
XP_008805180.1 PREDICTED: ribosome maturation protein SBDS [Phoe...   162   2e-46
XP_002520247.1 PREDICTED: ribosome maturation protein SBDS [Rici...   162   2e-46
JAT57988.1 Ribosome maturation protein SBDS [Anthurium amnicola]      162   2e-46
XP_008466694.1 PREDICTED: ribosome maturation protein SBDS [Cucu...   162   2e-46
XP_004146781.1 PREDICTED: ribosome maturation protein SBDS [Cucu...   162   2e-46
XP_018715320.1 PREDICTED: ribosome maturation protein SBDS isofo...   162   3e-46
OMO60557.1 Ribosome maturation protein SBDS [Corchorus olitorius]     160   3e-46
XP_019174101.1 PREDICTED: ribosome maturation protein SBDS-like ...   162   3e-46
XP_010067086.1 PREDICTED: ribosome maturation protein SBDS isofo...   161   4e-46
OMO95029.1 Ribosome maturation protein SBDS [Corchorus capsularis]    162   4e-46

>XP_012843243.1 PREDICTED: ribosome maturation protein SBDS [Erythranthe guttata]
           EYU32458.1 hypothetical protein MIMGU_mgv1a008829mg
           [Erythranthe guttata]
          Length = 361

 Score =  168 bits (426), Expect = 1e-48
 Identities = 85/90 (94%), Positives = 87/90 (96%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSKEL AAFGMDDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKELVAAFGMDDQSKICLEIL 90


>XP_009384217.1 PREDICTED: ribosome maturation protein SBDS [Musa acuminata subsp.
           malaccensis]
          Length = 356

 Score =  166 bits (420), Expect = 7e-48
 Identities = 82/90 (91%), Positives = 87/90 (96%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSKS+VQPIGQKRLTNVA+VRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKSLVQPIGQKRLTNVAIVRLKKHGVRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKG+LAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGILAKSKDLIAAFGTDDQSKICLEIL 90


>XP_010270397.1 PREDICTED: ribosome maturation protein SBDS [Nelumbo nucifera]
          Length = 357

 Score =  164 bits (416), Expect = 3e-47
 Identities = 83/90 (92%), Positives = 87/90 (96%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSKS+VQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKSLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L AAFG D+Q +ICLEIL
Sbjct: 61  NVSKGVLAKSKDLIAAFGTDNQTEICLEIL 90


>XP_006858396.1 PREDICTED: ribosome maturation protein SBDS [Amborella trichopoda]
           ERN19863.1 hypothetical protein AMTR_s00071p00022960
           [Amborella trichopoda]
          Length = 359

 Score =  164 bits (416), Expect = 3e-47
 Identities = 83/90 (92%), Positives = 85/90 (94%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSKEL  AFG DD  KICLEIL
Sbjct: 61  NVSKGVLAKSKELIMAFGSDDHSKICLEIL 90


>XP_019247548.1 PREDICTED: ribosome maturation protein SBDS [Nicotiana attenuata]
           OIT02251.1 hypothetical protein A4A49_09382 [Nicotiana
           attenuata]
          Length = 372

 Score =  164 bits (416), Expect = 4e-47
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLIAAFGTDDQSKICLEIL 90


>XP_016439581.1 PREDICTED: ribosome maturation protein SBDS-like [Nicotiana
           tabacum]
          Length = 372

 Score =  164 bits (416), Expect = 4e-47
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLIAAFGTDDQSKICLEIL 90


>XP_009777273.1 PREDICTED: ribosome maturation protein SBDS [Nicotiana sylvestris]
           XP_016503638.1 PREDICTED: ribosome maturation protein
           SBDS-like [Nicotiana tabacum]
          Length = 372

 Score =  164 bits (416), Expect = 4e-47
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLIAAFGTDDQSKICLEIL 90


>XP_009625483.1 PREDICTED: ribosome maturation protein SBDS [Nicotiana
           tomentosiformis]
          Length = 372

 Score =  164 bits (416), Expect = 4e-47
 Identities = 83/90 (92%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLIAAFGTDDQSKICLEIL 90


>CDP11993.1 unnamed protein product [Coffea canephora]
          Length = 356

 Score =  164 bits (414), Expect = 5e-47
 Identities = 82/90 (91%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L  AFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLVKAFGTDDQAKICLEIL 90


>XP_010932822.1 PREDICTED: ribosome maturation protein SBDS [Elaeis guineensis]
           XP_010932823.1 PREDICTED: ribosome maturation protein
           SBDS [Elaeis guineensis] XP_010932824.1 PREDICTED:
           ribosome maturation protein SBDS [Elaeis guineensis]
          Length = 356

 Score =  163 bits (412), Expect = 1e-46
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSKS+VQPIGQKRLTNVA+VRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQS TVY+
Sbjct: 1   MSKSLVQPIGQKRLTNVAIVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYA 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKG+LAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGILAKSKDLIAAFGTDDQSKICLEIL 90


>XP_008805180.1 PREDICTED: ribosome maturation protein SBDS [Phoenix dactylifera]
          Length = 356

 Score =  162 bits (411), Expect = 2e-46
 Identities = 80/90 (88%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSKS+VQPIGQKRLTNVA+VRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQSQ VY+
Sbjct: 1   MSKSLVQPIGQKRLTNVAIVRLKKHGIRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYA 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKG+LAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGILAKSKDLIAAFGTDDQSKICLEIL 90


>XP_002520247.1 PREDICTED: ribosome maturation protein SBDS [Ricinus communis]
           EEF42033.1 Shwachman-Bodian-Diamond syndrome protein,
           putative [Ricinus communis]
          Length = 356

 Score =  162 bits (411), Expect = 2e-46
 Identities = 81/90 (90%), Positives = 85/90 (94%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSKS++QPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKDLDEVLQS TVYS
Sbjct: 1   MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L+ AFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLEKAFGTDDQTKICLEIL 90


>JAT57988.1 Ribosome maturation protein SBDS [Anthurium amnicola]
          Length = 357

 Score =  162 bits (411), Expect = 2e-46
 Identities = 79/90 (87%), Positives = 87/90 (96%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MS+S+VQP+GQKRLTNVAVVRLKKHG+RFEIACYKNKVLSWR+GVEKDLDEVLQSQTVYS
Sbjct: 1   MSRSLVQPVGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRAGVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK++ AAFG DDQ KICL+IL
Sbjct: 61  NVSKGVLAKSKDMIAAFGTDDQSKICLDIL 90


>XP_008466694.1 PREDICTED: ribosome maturation protein SBDS [Cucumis melo]
          Length = 359

 Score =  162 bits (410), Expect = 2e-46
 Identities = 80/90 (88%), Positives = 87/90 (96%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MS+S+VQPIGQKRLTNVAVVRLKKHG+RFEIACYKNKVLSWRSGVEKDLDEVLQSQ VYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAK+K+LKAAFG DDQ +ICL+IL
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKIL 90


>XP_004146781.1 PREDICTED: ribosome maturation protein SBDS [Cucumis sativus]
           KGN47741.1 hypothetical protein Csa_6G397690 [Cucumis
           sativus]
          Length = 359

 Score =  162 bits (410), Expect = 2e-46
 Identities = 80/90 (88%), Positives = 87/90 (96%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MS+S+VQPIGQKRLTNVAVVRLKKHG+RFEIACYKNKVLSWRSGVE+DLDEVLQSQ VYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVERDLDEVLQSQIVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAK+KELKAAFG DDQ +ICL+IL
Sbjct: 61  NVSKGVLAKTKELKAAFGTDDQTEICLKIL 90


>XP_018715320.1 PREDICTED: ribosome maturation protein SBDS isoform X1 [Eucalyptus
           grandis]
          Length = 385

 Score =  162 bits (411), Expect = 3e-46
 Identities = 81/92 (88%), Positives = 86/92 (93%)
 Frame = -3

Query: 277 EKMSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTV 98
           E MSK++VQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKD+DEVLQS TV
Sbjct: 30  EGMSKTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDVDEVLQSHTV 89

Query: 97  YSNVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           YSNVSKGVLAKSK+L  +FG DDQ KICLEIL
Sbjct: 90  YSNVSKGVLAKSKDLTKSFGTDDQTKICLEIL 121


>OMO60557.1 Ribosome maturation protein SBDS [Corchorus olitorius]
          Length = 300

 Score =  160 bits (405), Expect = 3e-46
 Identities = 80/90 (88%), Positives = 85/90 (94%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MS+++VQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRS VEKDLDEVLQSQTVYS
Sbjct: 1   MSRTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSRVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAK+K+L AAFG DDQ KICLE L
Sbjct: 61  NVSKGVLAKTKDLMAAFGTDDQTKICLEAL 90


>XP_019174101.1 PREDICTED: ribosome maturation protein SBDS-like [Ipomoea nil]
          Length = 361

 Score =  162 bits (409), Expect = 3e-46
 Identities = 81/90 (90%), Positives = 85/90 (94%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHG RFEIACYKNKVLSWRSGVEKD+DEVLQS TVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLLAAFGTDDQTKICLEIL 90


>XP_010067086.1 PREDICTED: ribosome maturation protein SBDS isoform X2 [Eucalyptus
           grandis] XP_018715321.1 PREDICTED: ribosome maturation
           protein SBDS isoform X2 [Eucalyptus grandis]
           XP_018715322.1 PREDICTED: ribosome maturation protein
           SBDS isoform X2 [Eucalyptus grandis] KCW65153.1
           hypothetical protein EUGRSUZ_G02653 [Eucalyptus grandis]
           KCW65154.1 hypothetical protein EUGRSUZ_G02653
           [Eucalyptus grandis]
          Length = 354

 Score =  161 bits (408), Expect = 4e-46
 Identities = 80/90 (88%), Positives = 85/90 (94%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MSK++VQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKD+DEVLQS TVYS
Sbjct: 1   MSKTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDVDEVLQSHTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAKSK+L  +FG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKSKDLTKSFGTDDQTKICLEIL 90


>OMO95029.1 Ribosome maturation protein SBDS [Corchorus capsularis]
          Length = 385

 Score =  162 bits (410), Expect = 4e-46
 Identities = 81/90 (90%), Positives = 86/90 (95%)
 Frame = -3

Query: 271 MSKSIVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSQTVYS 92
           MS+++VQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRS VEKDLDEVLQSQTVYS
Sbjct: 1   MSRTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSRVEKDLDEVLQSQTVYS 60

Query: 91  NVSKGVLAKSKELKAAFGMDDQKKICLEIL 2
           NVSKGVLAK+K+L AAFG DDQ KICLEIL
Sbjct: 61  NVSKGVLAKTKDLMAAFGTDDQTKICLEIL 90


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