BLASTX nr result

ID: Panax24_contig00017178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00017178
         (1128 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017247046.1 PREDICTED: uncharacterized protein LOC108218564 i...   164   8e-41
XP_017247043.1 PREDICTED: uncharacterized protein LOC108218564 i...   164   9e-41
KZM97904.1 hypothetical protein DCAR_014734 [Daucus carota subsp...   164   9e-41
KVI10426.1 DNA glycosylase, partial [Cynara cardunculus var. sco...    96   1e-17

>XP_017247046.1 PREDICTED: uncharacterized protein LOC108218564 isoform X2 [Daucus
            carota subsp. sativus]
          Length = 1453

 Score =  164 bits (414), Expect = 8e-41
 Identities = 120/387 (31%), Positives = 177/387 (45%), Gaps = 57/387 (14%)
 Frame = -2

Query: 995  WVPLTPKKPGSESITRERNLKNSIHSNCMNSVDKDGGLCNGEAAFAFTDGSGIRFGVETC 816
            WVPLTP+K   ESI+  +N K+    N   SVD +   C+G+   +  +G  I  GVE  
Sbjct: 9    WVPLTPQKVCLESISGVKNCKDP---NFTESVDVNSDFCDGKVVSS--NGVEITLGVEKD 63

Query: 815  DRQYAEKETEKVPESDNVDTKLHCSEN--------SQSSPGLA----------------- 711
            + +  EKE ++V E ++ +  L+C+          S S+PGL                  
Sbjct: 64   ESRCTEKEGQRVTELEDSERNLYCAGKLMEHMDSPSVSTPGLGEKQNTRPRHNDDESRHT 123

Query: 710  ----------------------------SPSVATPSPSEKQNIKKRPNNGIDVNMKPKQR 615
                                        SPSV TP P+EKQ+ +KR N+GID+N KPKQR
Sbjct: 124  DKKENQVGKFEDEERKLHCAENLPRDIDSPSVLTPCPAEKQDSRKRNNDGIDLNKKPKQR 183

Query: 614  LKMKRHRPKVAIDHIHGQ--PRXXXXXXXXXXXXXXXXXXXANLRAKIYSANKGDLKGTA 441
             K+K+HRPK+A+D    +  P+                    NLR K Y     + KG  
Sbjct: 184  PKVKKHRPKIAVDRWMPRKIPKSQTPRNSTPKDNRPSTTKNVNLRGKRYLGKLTNRKGFT 243

Query: 440  ITSESVNAEAVFVSPTCVAVSCKRSLNFDIQEIDHRDDLAKSCSGPLD--FNLDNQEKCD 267
             TSE V  +A   +   VA+ CKRSL F+ + +D  D + +SCS P    F+L + E   
Sbjct: 244  STSEDVRGDANSETSAGVAILCKRSLKFECEAVDKCDCVVESCSRPHQDQFHLRSVE--- 300

Query: 266  FLWKVATSKRGARKRRIYIKNNSHGASESFDKHIIELHPDLNIESREGGENCARRFFYQY 87
                                    G   S D   +++  D N++S+E GENC+ RF  QY
Sbjct: 301  ------------------------GLQMSTD---LDMCSDFNVQSKERGENCSSRFLNQY 333

Query: 86   HRRKKSVERSSMKSKFGLNMGVEECTS 6
             RR + V++ S ++  G+N+G +ECT+
Sbjct: 334  QRRMRGVDKPSSEANTGINIGTKECTN 360


>XP_017247043.1 PREDICTED: uncharacterized protein LOC108218564 isoform X1 [Daucus
            carota subsp. sativus] XP_017247045.1 PREDICTED:
            uncharacterized protein LOC108218564 isoform X1 [Daucus
            carota subsp. sativus]
          Length = 1816

 Score =  164 bits (414), Expect = 9e-41
 Identities = 120/387 (31%), Positives = 177/387 (45%), Gaps = 57/387 (14%)
 Frame = -2

Query: 995  WVPLTPKKPGSESITRERNLKNSIHSNCMNSVDKDGGLCNGEAAFAFTDGSGIRFGVETC 816
            WVPLTP+K   ESI+  +N K+    N   SVD +   C+G+   +  +G  I  GVE  
Sbjct: 9    WVPLTPQKVCLESISGVKNCKDP---NFTESVDVNSDFCDGKVVSS--NGVEITLGVEKD 63

Query: 815  DRQYAEKETEKVPESDNVDTKLHCSEN--------SQSSPGLA----------------- 711
            + +  EKE ++V E ++ +  L+C+          S S+PGL                  
Sbjct: 64   ESRCTEKEGQRVTELEDSERNLYCAGKLMEHMDSPSVSTPGLGEKQNTRPRHNDDESRHT 123

Query: 710  ----------------------------SPSVATPSPSEKQNIKKRPNNGIDVNMKPKQR 615
                                        SPSV TP P+EKQ+ +KR N+GID+N KPKQR
Sbjct: 124  DKKENQVGKFEDEERKLHCAENLPRDIDSPSVLTPCPAEKQDSRKRNNDGIDLNKKPKQR 183

Query: 614  LKMKRHRPKVAIDHIHGQ--PRXXXXXXXXXXXXXXXXXXXANLRAKIYSANKGDLKGTA 441
             K+K+HRPK+A+D    +  P+                    NLR K Y     + KG  
Sbjct: 184  PKVKKHRPKIAVDRWMPRKIPKSQTPRNSTPKDNRPSTTKNVNLRGKRYLGKLTNRKGFT 243

Query: 440  ITSESVNAEAVFVSPTCVAVSCKRSLNFDIQEIDHRDDLAKSCSGPLD--FNLDNQEKCD 267
             TSE V  +A   +   VA+ CKRSL F+ + +D  D + +SCS P    F+L + E   
Sbjct: 244  STSEDVRGDANSETSAGVAILCKRSLKFECEAVDKCDCVVESCSRPHQDQFHLRSVE--- 300

Query: 266  FLWKVATSKRGARKRRIYIKNNSHGASESFDKHIIELHPDLNIESREGGENCARRFFYQY 87
                                    G   S D   +++  D N++S+E GENC+ RF  QY
Sbjct: 301  ------------------------GLQMSTD---LDMCSDFNVQSKERGENCSSRFLNQY 333

Query: 86   HRRKKSVERSSMKSKFGLNMGVEECTS 6
             RR + V++ S ++  G+N+G +ECT+
Sbjct: 334  QRRMRGVDKPSSEANTGINIGTKECTN 360


>KZM97904.1 hypothetical protein DCAR_014734 [Daucus carota subsp. sativus]
          Length = 1917

 Score =  164 bits (414), Expect = 9e-41
 Identities = 120/387 (31%), Positives = 177/387 (45%), Gaps = 57/387 (14%)
 Frame = -2

Query: 995  WVPLTPKKPGSESITRERNLKNSIHSNCMNSVDKDGGLCNGEAAFAFTDGSGIRFGVETC 816
            WVPLTP+K   ESI+  +N K+    N   SVD +   C+G+   +  +G  I  GVE  
Sbjct: 9    WVPLTPQKVCLESISGVKNCKDP---NFTESVDVNSDFCDGKVVSS--NGVEITLGVEKD 63

Query: 815  DRQYAEKETEKVPESDNVDTKLHCSEN--------SQSSPGLA----------------- 711
            + +  EKE ++V E ++ +  L+C+          S S+PGL                  
Sbjct: 64   ESRCTEKEGQRVTELEDSERNLYCAGKLMEHMDSPSVSTPGLGEKQNTRPRHNDDESRHT 123

Query: 710  ----------------------------SPSVATPSPSEKQNIKKRPNNGIDVNMKPKQR 615
                                        SPSV TP P+EKQ+ +KR N+GID+N KPKQR
Sbjct: 124  DKKENQVGKFEDEERKLHCAENLPRDIDSPSVLTPCPAEKQDSRKRNNDGIDLNKKPKQR 183

Query: 614  LKMKRHRPKVAIDHIHGQ--PRXXXXXXXXXXXXXXXXXXXANLRAKIYSANKGDLKGTA 441
             K+K+HRPK+A+D    +  P+                    NLR K Y     + KG  
Sbjct: 184  PKVKKHRPKIAVDRWMPRKIPKSQTPRNSTPKDNRPSTTKNVNLRGKRYLGKLTNRKGFT 243

Query: 440  ITSESVNAEAVFVSPTCVAVSCKRSLNFDIQEIDHRDDLAKSCSGPLD--FNLDNQEKCD 267
             TSE V  +A   +   VA+ CKRSL F+ + +D  D + +SCS P    F+L + E   
Sbjct: 244  STSEDVRGDANSETSAGVAILCKRSLKFECEAVDKCDCVVESCSRPHQDQFHLRSVE--- 300

Query: 266  FLWKVATSKRGARKRRIYIKNNSHGASESFDKHIIELHPDLNIESREGGENCARRFFYQY 87
                                    G   S D   +++  D N++S+E GENC+ RF  QY
Sbjct: 301  ------------------------GLQMSTD---LDMCSDFNVQSKERGENCSSRFLNQY 333

Query: 86   HRRKKSVERSSMKSKFGLNMGVEECTS 6
             RR + V++ S ++  G+N+G +ECT+
Sbjct: 334  QRRMRGVDKPSSEANTGINIGTKECTN 360


>KVI10426.1 DNA glycosylase, partial [Cynara cardunculus var. scolymus]
          Length = 1405

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 101/376 (26%), Positives = 158/376 (42%), Gaps = 52/376 (13%)
 Frame = -2

Query: 1043 MESGNAMEKGLSRAGIWVPLTPKKP-------GSESITR---ERNLKNSIHSNCMNSVDK 894
            MESG++ME    R G+W+PLTP KP       G  S+       N K ++ S     ++ 
Sbjct: 1    MESGDSME----RDGVWMPLTPGKPIPARLGLGLHSVQPMGGRHNCKATLTSGQGTGIEN 56

Query: 893  DGGLCNGEAAF---AFTDGSGIR--------FG-----------------VETCDRQYAE 798
                    A+F    + + +GI         FG                  +  D   A 
Sbjct: 57   LNEAFPFMASFNATGYLEHNGINEMYGLKAGFGEREADLGVAGKDPKSNAADQHDTSCAR 116

Query: 797  KETEKVPESDNVDTKLHCSENSQSSPGLASPSVATPSPSEKQNIKKRPNNGIDVNMKPKQ 618
            +E  KVP S+     +H    S++  G      + P+ SEK++ +KR N+GID+N KP Q
Sbjct: 117  EEEVKVPHSECDSKNVHRVHESRAGVG------SVPTTSEKKDSRKRRNDGIDLNKKPSQ 170

Query: 617  RLKMKRHRPKVAIDHIHGQ-PRXXXXXXXXXXXXXXXXXXXANLRAKIYSANKGDLKGTA 441
            R +MK+HRPK+  D    + P+                     ++ +   A K    G+ 
Sbjct: 171  RPRMKKHRPKILDDSKPKKVPKAQTPRASTPRPKTPKPVTPNRVQERRKPARKNTFTGST 230

Query: 440  ITSES----------VNAEAVFVSPTCVAVSCKRSLNFDIQEIDHRDD-LAKSCSGPLDF 294
               +S           + ++  +S   V  SCKRSL+F+   +D +   ++KS   P   
Sbjct: 231  SCMQSSTSYGYKDVVQDVQSASMSSIIVFKSCKRSLDFNHHLVDGKSHYVSKSHVQPRSV 290

Query: 293  NLDNQEKCDFLWKVATSKRGARKRRIYIKNNSHGASESF-DKHIIELHPDLN-IESREGG 120
            N D  E   +  K+ TSKR   +R  + K     + +   D +  + H D + I ++E  
Sbjct: 291  NYDLGE-FSYFGKLVTSKRNTPRRSRFQKKCLKASEDLLADNNKQQCHQDTSVIRNQELA 349

Query: 119  ENCARRFFYQYHRRKK 72
            E   RRF Y Y RRKK
Sbjct: 350  ETHGRRFVYFYQRRKK 365


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