BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00017066
         (1907 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN...   836   0.0  
AAW22873.1 putative polyprotein [Solanum lycopersicum]                790   0.0  
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...   806   0.0  
BAA11674.1 unnamed protein product [Nicotiana tabacum]                717   0.0  
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN...   707   0.0  
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN...   707   0.0  
AAK29467.1 polyprotein-like [Solanum chilense]                        702   0.0  
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN...   698   0.0  
OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [...   691   0.0  
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro...   680   0.0  
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]             684   0.0  
AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]          681   0.0  
KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN...   645   0.0  
KYP50580.1 Retrovirus-related Pol polyprotein from transposon TN...   622   0.0  
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]        637   0.0  
CAN65281.1 hypothetical protein VITISV_035564 [Vitis vinifera]        616   0.0  
KYP68590.1 Retrovirus-related Pol polyprotein from transposon TN...   605   0.0  
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]                  631   0.0  
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]                  631   0.0  
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]                  630   0.0  

>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  836 bits (2159), Expect = 0.0
 Identities = 421/631 (66%), Positives = 495/631 (78%), Gaps = 15/631 (2%)
 Frame = -2

Query: 1906 DVVFHEHQNYEH--SDNATQPRDNRVPDLSEVPPPVQNATVGEGGQNEDMTDTDLHDGDG 1733
            DV+FHEH+  E      A +P ++ V   S VP   + AT G   Q  +    +   GD 
Sbjct: 694  DVIFHEHETIEDLKGGEAAKPMEDGVNPTSHVPS--ECATDGRQTQEPEHETEEPVFGDE 751

Query: 1732 S---------DAESVDQGEQPDIE---EPQLRRSTRERVPSIRYPSSEYLLVAEEGEPED 1589
                      D E+ +QGE        EPQ+RRSTRER PS +YPSSEY+L+A+EGEPE 
Sbjct: 752  ESVDEEVVVPDTEANEQGEPSYTSGQVEPQIRRSTRERQPSTKYPSSEYILIADEGEPES 811

Query: 1588 FQEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDGDKLVKY 1409
            FQEV++HKDKG W++AMQ+EMDSL +N+TYE             KWVFKLKKDGDKLV++
Sbjct: 812  FQEVQSHKDKGCWVKAMQEEMDSLKRNNTYELVQLPKGRRVLKNKWVFKLKKDGDKLVRH 871

Query: 1408 KARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKE 1229
            KARLVVKGF+QKQGIDF+EIFSPVVKM SIRV+LGLVASMDLELEQLDVKTAFLHGDL E
Sbjct: 872  KARLVVKGFSQKQGIDFEEIFSPVVKMCSIRVILGLVASMDLELEQLDVKTAFLHGDLDE 931

Query: 1228 EIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYV 1049
            EIYMEQPEGFEVKGKE +VCKLKKSLYGLKQAPRQWY KFDSF+  QG+ RT AD CVY+
Sbjct: 932  EIYMEQPEGFEVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFIKSQGFKRTDADPCVYI 991

Query: 1048 KRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRK 869
             R+P+G F+ILLLYVDDMLIVGQD  MI+ LK EL K+FDMKD+G AK ILGM I+RDRK
Sbjct: 992  NRYPNGKFLILLLYVDDMLIVGQDVQMIKNLKVELSKAFDMKDMGAAKHILGMDIIRDRK 1051

Query: 868  AKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSA 689
            A +LWLSQE+Y+ERVL RFNM +AKPV TPL  H KL+K  CP+    R+ M+ +PYSSA
Sbjct: 1052 AGKLWLSQERYIERVLERFNMKNAKPVITPLVGHFKLSKKSCPTI---REKMSTIPYSSA 1108

Query: 688  VGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPV 509
            VGSLMYAMVCTRPDIAHAVGVVSRYLSNPG+ HWEAVKWILRYL+ TS LCL FG   P+
Sbjct: 1109 VGSLMYAMVCTRPDIAHAVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCLRFGGAKPI 1168

Query: 508  LEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEM 332
            LEG+TDAD+AG  ++++STSGY+FTF+GGA+ WQSKLQKC++LSTTE+EY+AATEAGKEM
Sbjct: 1169 LEGYTDADMAGDLDDRKSTSGYIFTFSGGAISWQSKLQKCISLSTTEAEYVAATEAGKEM 1228

Query: 331  LWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXX 152
            LW+K+FLQELGLKQ+EY+VYCDSQSA+DL+KN  YH+RTKHIDVRYHW+R          
Sbjct: 1229 LWMKKFLQELGLKQEEYIVYCDSQSALDLSKNTMYHSRTKHIDVRYHWIRLAIEKQLFQL 1288

Query: 151  XXVHTDENPSDMLTKVVTRDKQEFCKELVGM 59
              +HTD N +DMLTK VTR+K   C ELVGM
Sbjct: 1289 KKIHTDRNAADMLTKNVTREKLRQCIELVGM 1319


>AAW22873.1 putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  790 bits (2040), Expect = 0.0
 Identities = 408/643 (63%), Positives = 482/643 (74%), Gaps = 25/643 (3%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPR-DNRVPDLSEVPPPVQNATVGE--GGQNED---------- 1766
            DVVF+EH+   H   A +    N   D+ ++P P  +A+  +  G   ED          
Sbjct: 45   DVVFYEHEMSFHLLGADKTYYSNFSHDVIDMPMPHVSASDDQLTGDAPEDGHEIAHEHDH 104

Query: 1765 ---------MTDTDLHDGDGSDAESVDQGEQ--PDIEEPQLRRSTRERVPSIRYPSSEYL 1619
                     +   D    D    ES +QGE+  P +EEP LR+STR R PS  YPSSEY+
Sbjct: 105  IEEVQPDVVVPQPDDEAVDVQHGESSNQGEKSSPHVEEPTLRKSTRVRQPSRLYPSSEYI 164

Query: 1618 LVAEEGEPEDFQEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKL 1439
            L+ +EGEPE  QEV +H DK +WL+AMQ++MDSL KN TY+             +W+FK 
Sbjct: 165  LITDEGEPESLQEVLSHSDKDHWLKAMQEDMDSLKKNETYDLVKPPKGKKVLKNRWLFKN 224

Query: 1438 KKDGDKLVKYKARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVK 1259
            KKDG+KLVK KARLVVKG  QK+GIDFDEIF+PVVKMTSIR++LGL   ++LELEQLDVK
Sbjct: 225  KKDGNKLVKRKARLVVKGCHQKKGIDFDEIFAPVVKMTSIRMILGLATCLNLELEQLDVK 284

Query: 1258 TAFLHGDLKEEIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYS 1079
            TAFLHGDL EEIYMEQPEGFEVKGKE+ VCKLKKSLYGLKQAPRQWY KFDSFM +  Y 
Sbjct: 285  TAFLHGDLHEEIYMEQPEGFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYK 344

Query: 1078 RTIADHCVYVKRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQI 899
            RT AD CVY ++F +GNF+IL LYVDDMLIVGQD +MI RLK +L KSFDMKDLGPAKQI
Sbjct: 345  RTTADPCVYFRKFSEGNFIILCLYVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQI 404

Query: 898  LGMKIVRDRKAKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRD 719
            LGM+I RDRKA +LWLSQE Y+ERVL RFNM +AKPV+TPLA+H KL+K  CP+T++ ++
Sbjct: 405  LGMEIARDRKAGKLWLSQENYIERVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKEKE 464

Query: 718  DMAAVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSL 539
             M+ +PYSS VGSLMYAMVCTRPDIAHAVG+VSRYL+NP + HWEAVKWILRYL+ TS+L
Sbjct: 465  SMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVHWEAVKWILRYLRGTSNL 524

Query: 538  CLVFGSTSPVLEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEY 362
             L FG   P+LEGFTDAD+AG  + ++STSGYLF FA GA+ WQSKLQKCVALSTTE EY
Sbjct: 525  SLCFGGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARGAISWQSKLQKCVALSTTEVEY 584

Query: 361  IAATEAGKEMLWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLR 182
            IAA EA KEMLWLKRFLQELGLKQ EYVV+CDS+SA+DL+KN  YH RTKHIDVRYHWLR
Sbjct: 585  IAAVEASKEMLWLKRFLQELGLKQSEYVVFCDSKSAMDLSKNIMYHARTKHIDVRYHWLR 644

Query: 181  XXXXXXXXXXXXVHTDENPSDMLTKVVTRDKQEFCKELVGMDS 53
                        +HT++N +DMLTKVV   K EFC +L GM S
Sbjct: 645  VVIKERLMKLKKIHTNKNGADMLTKVVPGSKLEFCSKLAGMSS 687


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease CAA32025.1 unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  806 bits (2083), Expect = 0.0
 Identities = 408/633 (64%), Positives = 490/633 (77%), Gaps = 15/633 (2%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQNATVGEGGQNEDMTDTDLHDGDGSD 1727
            DVVF E +    +D + + ++  +P+   +P    N T  E       T  ++ +     
Sbjct: 701  DVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAES------TTDEVSEQGEQP 754

Query: 1726 AESVDQGEQPD-----IEEPQ--------LRRSTRERVPSIRYPSSEYLLVAEEGEPEDF 1586
             E ++QGEQ D     +E P         LRRS R RV S RYPS+EY+L++++ EPE  
Sbjct: 755  GEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESL 814

Query: 1585 QEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDGD-KLVKY 1409
            +EV +H +K   ++AMQ+EM+SL KN TY+             KWVFKLKKDGD KLV+Y
Sbjct: 815  KEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRY 874

Query: 1408 KARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKE 1229
            KARLVVKGF QK+GIDFDEIFSPVVKMTSIR +L L AS+DLE+EQLDVKTAFLHGDL+E
Sbjct: 875  KARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEE 934

Query: 1228 EIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYV 1049
            EIYMEQPEGFEV GK+H+VCKL KSLYGLKQAPRQWYMKFDSFM  Q Y +T +D CVY 
Sbjct: 935  EIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYF 994

Query: 1048 KRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRK 869
            KRF + NF+ILLLYVDDMLIVG+D  +I +LKG+L KSFDMKDLGPA+QILGMKIVR+R 
Sbjct: 995  KRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERT 1054

Query: 868  AKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSA 689
            +++LWLSQEKY+ERVL RFNM +AKPVSTPLA H+KL+K MCP+T E + +MA VPYSSA
Sbjct: 1055 SRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSA 1114

Query: 688  VGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPV 509
            VGSLMYAMVCTRPDIAHAVGVVSR+L NPG+EHWEAVKWILRYL+ T+  CL FG + P+
Sbjct: 1115 VGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI 1174

Query: 508  LEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEM 332
            L+G+TDAD+AG  + ++S++GYLFTF+GGA+ WQSKLQKCVALSTTE+EYIAATE GKEM
Sbjct: 1175 LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEM 1234

Query: 331  LWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXX 152
            +WLKRFLQELGL Q EYVVYCDSQSAIDL+KN+ YH RTKHIDVRYHW+R          
Sbjct: 1235 IWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKV 1294

Query: 151  XXVHTDENPSDMLTKVVTRDKQEFCKELVGMDS 53
              + T+ENP+DMLTKVV R+K E CKELVGM S
Sbjct: 1295 LKISTNENPADMLTKVVPRNKFELCKELVGMHS 1327


>BAA11674.1 unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  717 bits (1850), Expect = 0.0
 Identities = 369/631 (58%), Positives = 459/631 (72%), Gaps = 15/631 (2%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQNATVGEGGQ----------NED-MT 1760
            DVVF E Q  E  D   +  D+      E+PP V    VG+  Q          NED + 
Sbjct: 698  DVVFVEDQTIEDIDKVEKSTDDSAE--FELPPTVVPRQVGDDVQDNQPEAPGLPNEDELA 755

Query: 1759 DTDLHDGDGSD-AESVDQGEQPDIEEPQLR-RSTRERVPSIRYPSSEYLLVAEEGEPEDF 1586
            DT+ ++ +G D A+  DQ + P +  P    RS R    S RY   EY+L+ + GEP+ F
Sbjct: 756  DTEGNEDNGDDDADEEDQPQPPILNNPPYHTRSGRVVQQSTRYSPHEYVLLTDGGEPDSF 815

Query: 1585 QEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDG-DKLVKY 1409
            +E    + K  W+ AMQDE+ SLH+N T+E             KWVFK+K D  + L ++
Sbjct: 816  EEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHDEHNSLPRF 875

Query: 1408 KARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKE 1229
            KARLVVKGF Q++GIDFDEIFSPVVKMTSIR VLGL AS++LE+EQ+DVKTAFLHGDL+E
Sbjct: 876  KARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEE 935

Query: 1228 EIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYV 1049
            EIYMEQP+GF+ KGKE  VC+L+KSLYGLKQAPRQWY KF+S M   GY +T +DHCV+ 
Sbjct: 936  EIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFA 995

Query: 1048 KRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRK 869
            ++F D +F+ILLLYVDDMLIVG++   I  LK +L K F MKDLGPAKQILGM+I+RDR+
Sbjct: 996  QKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKDLGPAKQILGMRIMRDRE 1055

Query: 868  AKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSA 689
            AK+LWLSQEKY+E+VL RFNM   K VS PLA+H +L+    PST + R  M  +PY+SA
Sbjct: 1056 AKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASA 1115

Query: 688  VGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPV 509
            VGSLMYAMVCTRPDIAHAVGVVSR+LSNPG+EHW+AVKWILRYL+ TS LCL FG  +PV
Sbjct: 1116 VGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPV 1175

Query: 508  LEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEM 332
            L G+TDAD+AG  + ++STSGYL  F+GGAV WQSKLQKCVALSTTE+E+IAATEA KE+
Sbjct: 1176 LVGYTDADMAGDVDSRKSTSGYLINFSGGAVSWQSKLQKCVALSTTEAEFIAATEACKEL 1235

Query: 331  LWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXX 152
            +W+K+FL ELG  QD Y ++CDSQSAI L KNA++H+R+KHIDVRY+W+R          
Sbjct: 1236 IWMKKFLTELGFSQDGYQLFCDSQSAIHLAKNASFHSRSKHIDVRYNWIRDVLEKKMLRL 1295

Query: 151  XXVHTDENPSDMLTKVVTRDKQEFCKELVGM 59
              +HTDEN SDMLTK + + K EFC+E  G+
Sbjct: 1296 EKIHTDENGSDMLTKTLPKGKFEFCREAAGI 1326


>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  707 bits (1826), Expect = 0.0
 Identities = 355/618 (57%), Positives = 451/618 (72%), Gaps = 2/618 (0%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQNATVGEGGQNEDMTDTDLHDGDGSD 1727
            DVVF E Q  E   N+ +PR  +  +L+ V     N T  +    ED    +  + +  D
Sbjct: 684  DVVFFEDQTIEDIKNSEKPRLRKSTELTPVQHE-NNETHQDNDPEEDEPVLEQSNQETHD 742

Query: 1726 AESVDQGEQPDIEEPQLRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEVKTHKDKGNWL 1547
              + +  +   +  P+ RRS+RER PS  Y + EY+++ +EGEP+ ++E      K  W 
Sbjct: 743  EPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEGEPQSYKEAIKDIHKEEWR 802

Query: 1546 RAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLK-KDGDKLVKYKARLVVKGFAQKQ 1370
            +AMQ+EM SLH+NHTYE             KWV+++K +D +   +YKARLVVKGF Q++
Sbjct: 803  KAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEK 862

Query: 1369 GIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYMEQPEGFEVK 1190
            GIDF+EIFSPVVKM+SIRV+LG+ A+ DLE+EQLDVKTAFLHGDL+EEIYMEQPEGF+V 
Sbjct: 863  GIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFKVP 922

Query: 1189 GKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPDGNFVILLL 1010
            GKE+LVC+L KSLYGLKQAPRQWY KF+SFM +  + +T +DHCV++KR+  G+F+ILLL
Sbjct: 923  GKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLL 982

Query: 1009 YVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLWLSQEKYVE 830
            YVDDMLI GQD   I  LK +L KSF MKDLGPAKQILGM+I RDR  + LWLSQE+Y+E
Sbjct: 983  YVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIE 1042

Query: 829  RVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGSLMYAMVCTRP 650
            +VL +FNM   KPV+TPLA H +L+    P+++   ++M  +PYSS VGSLMYAM+CTRP
Sbjct: 1043 KVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRP 1102

Query: 649  DIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGFTDADIAG-F 473
            DIA+AVGVVSR+L++PG EHW AVKWILRYL+ TS  CL FG   PVL+G+TDAD+AG  
Sbjct: 1103 DIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDI 1162

Query: 472  EEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLKRFLQELGLK 293
            + ++STSGYL TFAGGAV WQSKLQKCVALSTTE+EYIAATEA KEMLW+K  L ELG++
Sbjct: 1163 DSRKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVE 1222

Query: 292  QDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDENPSDML 113
            Q+ YVV CD+QSAI L KN+ +H+RTKHID RYHW+R            VHTDEN SDM+
Sbjct: 1223 QERYVVKCDNQSAIYLAKNSKFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMM 1282

Query: 112  TKVVTRDKQEFCKELVGM 59
            TKV+   K E C +  G+
Sbjct: 1283 TKVIPTKKFEDCCQGAGL 1300


>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  707 bits (1826), Expect = 0.0
 Identities = 355/618 (57%), Positives = 451/618 (72%), Gaps = 2/618 (0%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQNATVGEGGQNEDMTDTDLHDGDGSD 1727
            DVVF E Q  E   N+ +PR  +  +L+ V     N T  +    ED    +  + +  D
Sbjct: 684  DVVFFEDQTIEDIKNSEKPRLRKSTELTPVQHE-NNETHQDNDPEEDEPVLEQSNQETHD 742

Query: 1726 AESVDQGEQPDIEEPQLRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEVKTHKDKGNWL 1547
              + +  +   +  P+ RRS+RER PS  Y + EY+++ +EGEP+ ++E      K  W 
Sbjct: 743  EPAQEDPQSSSLPAPEPRRSSRERRPSTWYNTEEYVMLTDEGEPQSYKEAIKDIHKEEWR 802

Query: 1546 RAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLK-KDGDKLVKYKARLVVKGFAQKQ 1370
            +AMQ+EM SLH+NHTYE             KWV+++K +D +   +YKARLVVKGF Q++
Sbjct: 803  KAMQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFGQEK 862

Query: 1369 GIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYMEQPEGFEVK 1190
            GIDF+EIFSPVVKM+SIRV+LG+ A+ DLE+EQLDVKTAFLHGDL+EEIYMEQPEGF+V 
Sbjct: 863  GIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFKVP 922

Query: 1189 GKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPDGNFVILLL 1010
            GKE+LVC+L KSLYGLKQAPRQWY KF+SFM +  + +T +DHCV++KR+  G+F+ILLL
Sbjct: 923  GKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDFLILLL 982

Query: 1009 YVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLWLSQEKYVE 830
            YVDDMLI GQD   I  LK +L KSF MKDLGPAKQILGM+I RDR  + LWLSQE+Y+E
Sbjct: 983  YVDDMLIFGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIE 1042

Query: 829  RVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGSLMYAMVCTRP 650
            +VL +FNM   KPV+TPLA H +L+    P+++   ++M  +PYSS VGSLMYAM+CTRP
Sbjct: 1043 KVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRP 1102

Query: 649  DIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGFTDADIAG-F 473
            DIA+AVGVVSR+L++PG EHW AVKWILRYL+ TS  CL FG   PVL+G+TDAD+AG  
Sbjct: 1103 DIAYAVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDI 1162

Query: 472  EEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLKRFLQELGLK 293
            + ++STSGYL TFAGGAV WQSKLQKCVALSTTE+EYIAATEA KEMLW+K  L ELG++
Sbjct: 1163 DSRKSTSGYLTTFAGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVE 1222

Query: 292  QDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDENPSDML 113
            Q+ YVV CD+QSAI L KN+ +H+RTKHID RYHW+R            VHTDEN SDM+
Sbjct: 1223 QERYVVKCDNQSAIYLAKNSKFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMM 1282

Query: 112  TKVVTRDKQEFCKELVGM 59
            TKV+   K E C +  G+
Sbjct: 1283 TKVIPTKKFEDCCQGAGL 1300


>AAK29467.1 polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  702 bits (1813), Expect = 0.0
 Identities = 372/630 (59%), Positives = 460/630 (73%), Gaps = 11/630 (1%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSD--NATQPRDNRVPDLSEVP-----PPVQNATVGEGGQNEDMTDTDL 1748
            DV+F E +    +D     + ++  +P+L  +P     P    +T+ E  + E+  D  +
Sbjct: 702  DVIFRESEVGTAADLSEKAKKKNGIIPNLVTIPSSSNHPTSAESTIDEVVEQEEQPDEIV 761

Query: 1747 HDGDGSDAESVDQGEQPDIEEPQ-LRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEVKT 1571
              G+    ++ +Q E P+ E+ Q LRRS R+RV S +YPSSEY+L+  EGEPE+ +EV +
Sbjct: 762  EQGEQL-GDNTEQMEYPEEEQSQPLRRSERQRVESTKYPSSEYVLIKYEGEPENLKEVLS 820

Query: 1570 HKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDGD-KLVKYKARLV 1394
            H +K  W++AM +EM SL KN TY+             KWVFKLKKDG+ KLV+YKARLV
Sbjct: 821  HPEKSQWMKAMHEEMGSLQKNGTYQLVELPKGKRPLKCKWVFKLKKDGNGKLVRYKARLV 880

Query: 1393 VKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYME 1214
            VKGF QK+GIDFDEIFSPVVKMTSIR +L + AS+DLE+EQLDVKTAFLHGDL+EEIYME
Sbjct: 881  VKGFEQKKGIDFDEIFSPVVKMTSIRTILSIAASLDLEVEQLDVKTAFLHGDLEEEIYME 940

Query: 1213 QPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPD 1034
            Q EGFEV GK+H+VCKL KSLYGLKQAPRQWY KFDSFM  Q Y  T +  CVY KRF D
Sbjct: 941  QGEGFEVSGKKHMVCKLNKSLYGLKQAPRQWYKKFDSFMKSQTYRNTYSHPCVYFKRFSD 1000

Query: 1033 GNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLW 854
             NF+ILLLY D MLIVG+D ++I +L+ +  KSFDMKDLGPAKQILGMKI R+ + K+L 
Sbjct: 1001 KNFIILLLYTDYMLIVGKDKELIAKLRKDFSKSFDMKDLGPAKQILGMKIAREEQ-KKLG 1059

Query: 853  LSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEG-RDDMAAVPYSSAVGSL 677
            LS EKY+ERVL RFNM  AKP+STPL S++KLTK M P+ K+G + DMA VPYSSAVGS 
Sbjct: 1060 LSHEKYIERVLERFNMKSAKPISTPLVSYLKLTKQMFPTKKKGEKGDMAKVPYSSAVGSF 1119

Query: 676  MYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGF 497
            MYAMVCTRP+I  AV VVSR+L  PG+EH EAVKWILRYL+ T+     F  + P+ +G+
Sbjct: 1120 MYAMVCTRPNIV-AVCVVSRFLEIPGKEHLEAVKWILRYLRRTTRDYFCFEGSDPISKGY 1178

Query: 496  TDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLK 320
            T+ D+ G  + ++ST+ YLFTF+GG + WQSKLQK VALSTTE++YIA TE  KEMLWLK
Sbjct: 1179 TNVDMEGDLDNRKSTTCYLFTFSGGDISWQSKLQKYVALSTTEAKYIAGTEVCKEMLWLK 1238

Query: 319  RFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVH 140
            RFLQE GL Q EYVVYC+SQSA+DL+K A YH  TKHID+RYHW+R            + 
Sbjct: 1239 RFLQEHGLHQKEYVVYCESQSAMDLSKKAMYHATTKHIDMRYHWIREMVDDGSLQVVKIP 1298

Query: 139  TDENPSDMLTKVVTRDKQEFCKELVGMDSK 50
            T ENP+DM+TKVV  +K E  KELVGM SK
Sbjct: 1299 TSENPADMVTKVVQNEKFELWKELVGMHSK 1328


>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  698 bits (1802), Expect = 0.0
 Identities = 356/622 (57%), Positives = 452/622 (72%), Gaps = 4/622 (0%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQNATVGEGGQN-EDMTDTDLHDGDGS 1730
            DV+F E Q  +      +P+   V D S   P V N + GE  Q  ++   T+  + + S
Sbjct: 694  DVIFFEDQTIQDIKKPEKPKQKEVQDSS---PIVINNSGGEISQRIDEPNQTEQPESEQS 750

Query: 1729 DAESVDQGE-QPDIEEPQLRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEVKTHKDKGN 1553
                 +Q E   + +EP++RRS R R PS RY S +Y+ + +EGEP+ F E     DK  
Sbjct: 751  QTMQEEQMETNQEEQEPEVRRSMRVRQPSKRYFSDDYVNLTDEGEPQSFIEAIEMNDKEK 810

Query: 1552 WLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLK-KDGDKLVKYKARLVVKGFAQ 1376
            WL+AM++E+ SL +N TYE             KWVFKLK ++ +   +YKAR+VVKG  Q
Sbjct: 811  WLQAMEEELQSLKENETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQ 870

Query: 1375 KQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYMEQPEGFE 1196
            K+GIDF+EIFSPVVKMTSIR +LGL A +DLE+EQLDVKTAFLHGDL+EEIYMEQPEGF 
Sbjct: 871  KKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQLDVKTAFLHGDLEEEIYMEQPEGFA 930

Query: 1195 VKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPDGNFVIL 1016
              GKEHLVC+LKKSLYGLKQAPRQWY KFD FM    + +T AD CV+VK + +G  +IL
Sbjct: 931  EPGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGESIIL 990

Query: 1015 LLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLWLSQEKY 836
            LLYVDDMLIVG+D   I  LK  L KSF MKDLG  K+ILGMKI+RDR  + LW+SQE Y
Sbjct: 991  LLYVDDMLIVGKDKTKIAALKKALSKSFAMKDLGSVKKILGMKIIRDRSKRMLWMSQEDY 1050

Query: 835  VERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGSLMYAMVCT 656
            +++VL RFNM +AK V  PL  H+KL+K  CP  +E +++M+ VPYSSAVGSLMYAMVCT
Sbjct: 1051 IKKVLERFNMHNAKSVHVPLPGHLKLSKKQCPVNEE-KEEMSKVPYSSAVGSLMYAMVCT 1109

Query: 655  RPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGFTDADIAG 476
            RPDIA+AVGVVSR+LSNPG+EHW AVKWILRYLK T+  CL FG+ + +L G++DAD+AG
Sbjct: 1110 RPDIAYAVGVVSRFLSNPGKEHWNAVKWILRYLKGTAKSCLCFGNGNLMLTGYSDADMAG 1169

Query: 475  -FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLKRFLQELG 299
              + ++STSGYL TFAGGA+ WQS+LQKC+ALSTTE+E+IA TE  KE+LW+K+FLQELG
Sbjct: 1170 DVDSRKSTSGYLITFAGGAISWQSRLQKCIALSTTEAEFIAITEGCKEILWMKKFLQELG 1229

Query: 298  LKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDENPSD 119
              Q+ YV+YCDSQSAI L+KN+T+H+R+KHIDVRYHW+R            +HT +N +D
Sbjct: 1230 QDQESYVLYCDSQSAIHLSKNSTFHSRSKHIDVRYHWIRDVLESKMLKIEKIHTKDNGAD 1289

Query: 118  MLTKVVTRDKQEFCKELVGMDS 53
            M+TK + R+K E CKE+ G+ S
Sbjct: 1290 MMTKSLPREKIEVCKEVAGLAS 1311


>OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
            capsularis]
          Length = 1500

 Score =  691 bits (1782), Expect = 0.0
 Identities = 366/626 (58%), Positives = 440/626 (70%), Gaps = 8/626 (1%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRV----PDLSEVPPPVQNATVGEGGQNEDMTDTDLHDG 1739
            DVVFHEH+    +D   + + +RV     DL+    P + AT G               G
Sbjct: 813  DVVFHEHETI--ADFEKKEKTSRVVHDDDDLTPTTVPPRRATDG---------------G 855

Query: 1738 DGSDAESVDQGEQPDI---EEPQLRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEVKTH 1568
            D  DA  ++QGEQP +    EPQLRRS R  +PS +YPSSE++L+ ++GEPE F++V++ 
Sbjct: 856  DEQDAVGIEQGEQPPLPENNEPQLRRSARGNIPSTKYPSSEFVLLTDDGEPESFRDVQST 915

Query: 1567 KDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDGDKLVKYKARLVVK 1388
             DK  WL AMQ+EMDSL KN TYE             KWVFKLKKDG+KLV+YK  LVVK
Sbjct: 916  SDKQRWLEAMQEEMDSLQKNGTYELVELPKGKRPLKNKWVFKLKKDGNKLVRYKTCLVVK 975

Query: 1387 GFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYMEQP 1208
            GFAQK  IDFDEIFSPVVKM+SIRVVLGL AS++LE+EQLDVKTAFLHGDL+EEIYM+QP
Sbjct: 976  GFAQKACIDFDEIFSPVVKMSSIRVVLGLAASLNLEIEQLDVKTAFLHGDLQEEIYMDQP 1035

Query: 1207 EGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPDGN 1028
            EGF+VKGKEH+VC+LKKSLYGLKQA RQWY KFDSFMV   + RT  D CVY + F   N
Sbjct: 1036 EGFKVKGKEHMVCRLKKSLYGLKQALRQWYKKFDSFMVSHLFKRTATDPCVYFRSF-GNN 1094

Query: 1027 FVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLWLS 848
            F+ILLLYVDDMLIVGQD ++I +LK +L +SFDMKDLGPAKQILGM I+RDRKA +LWLS
Sbjct: 1095 FIILLLYVDDMLIVGQDVELISKLKDDLSRSFDMKDLGPAKQILGMDIIRDRKAGKLWLS 1154

Query: 847  QEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGSLMYA 668
            QEKYVER+L RFNM DAK VSTPLA+H KLTK  CP +++ +D+MA + YSS VGSLMY 
Sbjct: 1155 QEKYVERILKRFNMQDAKSVSTPLANHFKLTKKSCPVSEKKKDEMAVILYSSVVGSLMYL 1214

Query: 667  MVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGFTDA 488
            MVCTRPDIAHAVGV+SR+LSNPG+ HWEAVKWI RYL+ TS +CL F ++  +LEGFTDA
Sbjct: 1215 MVCTRPDIAHAVGVMSRFLSNPGKVHWEAVKWIFRYLRGTSKMCLSFETSQTILEGFTDA 1274

Query: 487  DIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLKRFL 311
            D+AG  + ++STSGY+FTFAGGAV      +  +                  +L     L
Sbjct: 1275 DMAGDLDSRKSTSGYIFTFAGGAVSCSLSCRSVLPC----------------LLRRLNIL 1318

Query: 310  QELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDE 131
            Q L             QSA+DL+KN  YH RTKHIDVRYHWLR            +HTD+
Sbjct: 1319 QRL------------KQSALDLSKNTMYHARTKHIDVRYHWLRMATEDKELQLKKIHTDK 1366

Query: 130  NPSDMLTKVVTRDKQEFCKELVGMDS 53
            N +DMLTKVV R+K E C  L GMD+
Sbjct: 1367 NVADMLTKVVPREKLELCSNLAGMDT 1392



 Score = 82.4 bits (202), Expect = 2e-12
 Identities = 43/84 (51%), Positives = 49/84 (58%)
 Frame = -2

Query: 304 LGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDENP 125
           +G K  E   Y    SA+DL+KN  YH RTKHIDVRYHWLR            +HTD N 
Sbjct: 166 IGAKSRELSRY---MSALDLSKNTMYHARTKHIDVRYHWLRMATEDKELQLKKIHTDRNV 222

Query: 124 SDMLTKVVTRDKQEFCKELVGMDS 53
             MLTKVV R+K E C  L GMD+
Sbjct: 223 VGMLTKVVPREKLELCSNLAGMDT 246


>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  680 bits (1755), Expect = 0.0
 Identities = 347/633 (54%), Positives = 456/633 (72%), Gaps = 15/633 (2%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEV--------PPPVQNATVGE-GGQNEDMTD- 1757
            DVVF E Q  +  D   +       DL +V        P P+Q+   G+  G ++ + D 
Sbjct: 556  DVVFIEDQTIDDIDKTEKVDSQGSGDLIDVNPVPLDSSPDPIQDDVHGDVSGDHQTIGDF 615

Query: 1756 -TDLHDGDGSDAESVDQGEQPDIEEPQ--LRRSTRERVPSIRYPSSEYLLVAEEGEPEDF 1586
             T + D        V+  +Q  I  P   LRRS+R+R  S++Y   EY+L+ + GEP  +
Sbjct: 616  ATPIDD-------VVNDQQQAPIAPPAVPLRRSSRDRRSSVKYSPDEYVLLTDGGEPGCY 668

Query: 1585 QEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDG-DKLVKY 1409
            +E    + K  W+ AM+D++ SLH+NHT+E             +WV++LK++      +Y
Sbjct: 669  EEAMESECKDQWVEAMKDKLQSLHENHTFELVKLPKGKRALKNRWVYRLKQEEKSSSPRY 728

Query: 1408 KARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKE 1229
            KARLVVKG+ QK+G+DF+EIFSPVVKM+SIR +L L A  DLE+EQ+DVK AFLHGDL++
Sbjct: 729  KARLVVKGYTQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKIAFLHGDLED 788

Query: 1228 EIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYV 1049
            E+YMEQPEGF  + KE  VC+LKKSLYGLKQAPRQWY KF+S M +Q Y +T +DHCV+V
Sbjct: 789  ELYMEQPEGFVAQRKEDYVCRLKKSLYGLKQAPRQWYKKFESVMGEQSYKKTTSDHCVFV 848

Query: 1048 KRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRK 869
            K+F   +F+ILLLYVDDMLIVGQ+A  I +LK EL KSF MKDLGPAKQILG+++ RDRK
Sbjct: 849  KKFSGDDFIILLLYVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRK 908

Query: 868  AKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSA 689
            AK+LWLSQE+Y+E+VL +F+M  AK V+TP A H +L+    PST++ +++M  +PYSSA
Sbjct: 909  AKKLWLSQERYIEKVLQKFSMDKAKAVNTPFAMHFRLSVKHSPSTEKEKEEMQKIPYSSA 968

Query: 688  VGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPV 509
            VGSLMYAMVCTRPD+A+AVG VSR+LSN GREHW AVKWI+RYL+ TS++ L FG+  PV
Sbjct: 969  VGSLMYAMVCTRPDLAYAVGTVSRFLSNLGREHWNAVKWIMRYLRGTSNMKLCFGNEKPV 1028

Query: 508  LEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEM 332
              G+TD+D+AG  + + STSGYL T+AGGAV WQS+ QKCVALSTTESE+IAATEA KEM
Sbjct: 1029 TVGYTDSDMAGDIDSRRSTSGYLITYAGGAVAWQSRQQKCVALSTTESEFIAATEACKEM 1088

Query: 331  LWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXX 152
            LW+K+F+QELG  Q++YV+YCDSQSAI L+KN+T+H R+KHIDVRYHW+R          
Sbjct: 1089 LWMKKFVQELGFTQEKYVLYCDSQSAIHLSKNSTFHARSKHIDVRYHWIRDVLEAKLLEL 1148

Query: 151  XXVHTDENPSDMLTKVVTRDKQEFCKELVGMDS 53
              +HT++N +DMLTKV+ R K E C    GM++
Sbjct: 1149 EKIHTNDNGADMLTKVLPRGKFEACCLTSGMEA 1181


>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  684 bits (1765), Expect = 0.0
 Identities = 355/620 (57%), Positives = 436/620 (70%), Gaps = 12/620 (1%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPPPVQNAT-----VGEGGQNEDMT-----D 1757
            DVVF E+Q  E  D   QP       L ++ P  +  T     V E  QN D       D
Sbjct: 696  DVVFFENQTIEDIDKVKQPESRDSGSLVDIEPVSRRYTDDVDEVQENVQNGDPVPDYQGD 755

Query: 1756 TDLHDGDGSDAESVDQGEQPDIEEPQLRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEV 1577
            T   DG   D    +Q     +     RRS RER PS RY  S+Y+L+ + GEPE ++E 
Sbjct: 756  TVDVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGEPESYEEA 815

Query: 1576 KTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLK-KDGDKLVKYKAR 1400
                 K  W  AMQ+EM+SL+ N T+E             +WV+++K ++G  + ++KAR
Sbjct: 816  MESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKAR 875

Query: 1399 LVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIY 1220
            LVVKGF+QK+GIDFDEIFSPVVK +SIRVVLGL A +D+E+EQ+DVKTAFLHGDL EEIY
Sbjct: 876  LVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIY 935

Query: 1219 MEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRF 1040
            MEQPEGF+VKGKE  VC+LKKSLYGLKQAPRQWY KF S M   GY +T +DHCV+V R+
Sbjct: 936  MEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNRY 995

Query: 1039 PDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKR 860
             D +FVILLLYVDDMLIVG++A  I+ LK EL KSF MKD+GPAKQILGMKI+RDR+ K+
Sbjct: 996  SDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKK 1055

Query: 859  LWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGS 680
            LWLSQEKY+E+VL RF+M++AKPVSTPL  H KL K  CPS+++ +++M  VPYSSAVGS
Sbjct: 1056 LWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGS 1115

Query: 679  LMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEG 500
            LMYAMVCTRPDIAHAVGVVSR+LSNPGREHW+AVKWILRYL+ TSSL L FG+  P+L G
Sbjct: 1116 LMYAMVCTRPDIAHAVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTG 1175

Query: 499  FTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWL 323
            +TD+D+AG  + ++STSGYL T+AGGAV WQS+LQKCV LSTTE+E+IA+ EA KEMLW+
Sbjct: 1176 YTDSDMAGDIDTRKSTSGYLITYAGGAVSWQSRLQKCVDLSTTEAEFIASVEASKEMLWM 1235

Query: 322  KRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXV 143
            K+FLQELG  QD                      R+KHID RYHW+R            +
Sbjct: 1236 KKFLQELGFVQD----------------------RSKHIDTRYHWIRDILECKMLELEKI 1273

Query: 142  HTDENPSDMLTKVVTRDKQE 83
            HTD+N SDM+TK + R K E
Sbjct: 1274 HTDDNGSDMMTKALPRGKFE 1293


>AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score =  681 bits (1758), Expect = 0.0
 Identities = 345/624 (55%), Positives = 449/624 (71%), Gaps = 7/624 (1%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNA---TQPRDNRVPDLSEVPPPVQNATVGEGGQNEDMTDTDLHDGD 1736
            DV F E Q  E  D     T   DNR+ ++  V    Q+  V +  Q  D  D  + D +
Sbjct: 658  DVKFMEDQTIEDIDKTEKITSETDNRLSNVDPVLSDEQHDDVDDQ-QLGDAFDVPIDDSE 716

Query: 1735 GSDAESVDQ--GEQPDIEEPQLRRSTRERVPSIRYPSSEYLLVAEEGEPEDFQEVKTHKD 1562
                 S D+  G+ P+  + Q+RR          YPS +Y+ + +EGEPE + E    ++
Sbjct: 717  EEHGMSQDEDLGDAPEPPQVQIRR----------YPSDDYVTLTDEGEPECYLEAMESEE 766

Query: 1561 KGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDGDKLV-KYKARLVVKG 1385
            K  WL AMQDEM SLH NHT++             +W++++K++ +    +YKARLVVKG
Sbjct: 767  KKKWLDAMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKG 826

Query: 1384 FAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYMEQPE 1205
            F Q++GIDF+EIFSPVVKM+SIR+VL L A++DLE+EQ+DVKTAFLHGDL+EEIYM+QP+
Sbjct: 827  FRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQPD 886

Query: 1204 GFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPDGNF 1025
            GF V+GKE  VC+L+KSLYGLKQAPRQWY KF+S M +QGY +T +DHCV+VK+F + +F
Sbjct: 887  GFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDF 946

Query: 1024 VILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLWLSQ 845
            +ILLLYVDD+LIVG+D  MI RLK +L +SF MKD+G AKQILG++I+RDR+ K+LWLSQ
Sbjct: 947  IILLLYVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQ 1006

Query: 844  EKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGSLMYAM 665
            E YV+RVL RF M +AK VSTPLA+H KL+    PS +  + DM  +PY+SAVGSLMYAM
Sbjct: 1007 ENYVKRVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAM 1066

Query: 664  VCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGFTDAD 485
            VCTRPDIAH VG VSR++SNPGREHW AVKWILRYL+ T+ L L FG   P L G+TD+D
Sbjct: 1067 VCTRPDIAHVVGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSD 1126

Query: 484  IAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLKRFLQ 308
            + G  + + STSGY+  FAGGAV WQS+LQKCVALSTTE+E+IA TEA KE+LW+K+ LQ
Sbjct: 1127 MGGDIDSRRSTSGYVIKFAGGAVAWQSRLQKCVALSTTEAEFIAITEACKELLWVKKLLQ 1186

Query: 307  ELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDEN 128
            EL   QD+Y+++CDSQSAI L KN+T+H+R+KHIDVRYHW+R            VHTD+N
Sbjct: 1187 ELSFVQDKYLLFCDSQSAIYLGKNSTFHSRSKHIDVRYHWIRDALEARLLELAKVHTDDN 1246

Query: 127  PSDMLTKVVTRDKQEFCKELVGMD 56
             +DM+TK + R K E C ++ G +
Sbjct: 1247 CADMMTKSLPRSKSETCCKIAGAE 1270


>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 501

 Score =  645 bits (1665), Expect = 0.0
 Identities = 317/496 (63%), Positives = 389/496 (78%), Gaps = 2/496 (0%)
 Frame = -2

Query: 1540 MQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLK-KDGDKLVKYKARLVVKGFAQKQGI 1364
            MQ+EM SLH+NHTYE             KWV+++K +D +   +YKARLVVKGF+Q++GI
Sbjct: 1    MQEEMQSLHENHTYELVELPKGRRALKNKWVYRIKTEDNNTKPRYKARLVVKGFSQEKGI 60

Query: 1363 DFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEEIYMEQPEGFEVKGK 1184
            DF++IFSPVVKM+SIRV+LG+ A+ DLE+EQLDVKTAFLHGDL+EEI MEQPEGF+V GK
Sbjct: 61   DFEKIFSPVVKMSSIRVILGIAATQDLEIEQLDVKTAFLHGDLEEEICMEQPEGFKVPGK 120

Query: 1183 EHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVKRFPDGNFVILLLYV 1004
            ++LVC+L KSLYGLKQAPRQWY KF+ FM +  + RT +DHCV++KR+  G+F+ILLLYV
Sbjct: 121  QNLVCRLTKSLYGLKQAPRQWYKKFEFFMAEHEFKRTESDHCVFIKRYASGDFLILLLYV 180

Query: 1003 DDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKAKRLWLSQEKYVERV 824
            DDMLIVGQD   I  LK +L KSF MKDLGPAKQILGM+I RDR  + LWLSQE+Y+E+V
Sbjct: 181  DDMLIVGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIEKV 240

Query: 823  LARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAVGSLMYAMVCTRPDI 644
            L +FNM   KPV+TPLA H +L+    P+++   ++M  +PYSS VGSLMYAM+CTRPDI
Sbjct: 241  LEQFNMDKCKPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDI 300

Query: 643  AHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVLEGFTDADIAG-FEE 467
            A+AVGVVSR+L+NPG EHW AVKWILRYL+ TS  CL FG   PVLEG+TDAD+AG  + 
Sbjct: 301  AYAVGVVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDS 360

Query: 466  KESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEMLWLKRFLQELGLKQD 287
            ++STSGYL TF GGAV WQSKLQKCVALSTTE+EYIAATEA KEMLW+K  L ELG+ Q+
Sbjct: 361  RKSTSGYLTTFVGGAVSWQSKLQKCVALSTTEAEYIAATEACKEMLWMKNMLLELGVDQE 420

Query: 286  EYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXXXVHTDENPSDMLTK 107
             YV+ CD+QSAI L KN+T+H+RTKHID RYHW+R            VHTDEN SDM+TK
Sbjct: 421  RYVLKCDNQSAIYLAKNSTFHSRTKHIDTRYHWIREVLEEKKLHLDKVHTDENWSDMMTK 480

Query: 106  VVTRDKQEFCKELVGM 59
            V+   K E C +  G+
Sbjct: 481  VIPTKKFEDCCQGAGL 496


>KYP50580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 478

 Score =  622 bits (1603), Expect = 0.0
 Identities = 297/478 (62%), Positives = 380/478 (79%), Gaps = 2/478 (0%)
 Frame = -2

Query: 1618 LVAEEGEPEDFQEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKL 1439
            ++ +EGEPE ++E    ++K  WL AMQDEM SLH NHTY+             +W+FK+
Sbjct: 1    MLTDEGEPECYEEAIESEEKQKWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFKV 60

Query: 1438 KKDGDKLVK-YKARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDV 1262
            K++ +     YKARLVVKGF Q++G+DF+EIFSPVV+M+SIR +L L  ++DLE+E++DV
Sbjct: 61   KQESNSTSPIYKARLVVKGFRQRKGVDFNEIFSPVVRMSSIRTMLSLATTLDLEVEKMDV 120

Query: 1261 KTAFLHGDLKEEIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGY 1082
            KT FLHGDL+EEIYM+QP+GF ++GKE  VC+L+KSLYGLKQAPRQWY KF+S M +Q Y
Sbjct: 121  KTIFLHGDLEEEIYMKQPDGFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQDY 180

Query: 1081 SRTIADHCVYVKRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQ 902
             +T +DHCV+V++F D +F+ILLLYVDDMLIVG+D   I RLK +L +SF MKD+G AK+
Sbjct: 181  KKTTSDHCVFVRKFSDDDFIILLLYVDDMLIVGKDVSKIDRLKKQLGESFSMKDMGAAKK 240

Query: 901  ILGMKIVRDRKAKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGR 722
            ILG+ I+RDRK K+LWLSQE Y++ VL RF+M + K VSTPLA+H KL+   CPS +  +
Sbjct: 241  ILGISIIRDRKDKKLWLSQEHYIQNVLQRFHMENVKAVSTPLAAHFKLSVKQCPSNEVEK 300

Query: 721  DDMAAVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSS 542
             +M+ VPY+ AVGSLMYAMVCTRPDIAHAVG VSR+LSNPGREHW AVKWILRYL+ TS 
Sbjct: 301  INMSRVPYAYAVGSLMYAMVCTRPDIAHAVGTVSRFLSNPGREHWNAVKWILRYLRGTSG 360

Query: 541  LCLVFGSTSPVLEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESE 365
            L L FG   P L G++D+D+AG  + ++STSGYL  FAGG V WQS+LQKCVALSTTE+E
Sbjct: 361  LKLYFGGDKPTLVGYSDSDMAGDIDSRKSTSGYLVKFAGGVVAWQSRLQKCVALSTTEAE 420

Query: 364  YIAATEAGKEMLWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYH 191
            +IA TEA KE+LW+K+FLQELG  QD+Y++YCDSQSAI L KN T+H+++KHIDVRYH
Sbjct: 421  FIALTEACKELLWVKKFLQELGFVQDKYLLYCDSQSAIHLGKNQTFHSKSKHIDVRYH 478


>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  637 bits (1643), Expect = 0.0
 Identities = 342/646 (52%), Positives = 432/646 (66%), Gaps = 28/646 (4%)
 Frame = -2

Query: 1906 DVVFHEHQNYEHSDNATQPRDNRVPDLSEVPP-PVQNA-TVGEGGQNEDMTDT------- 1754
            DVVF E    +  +           DL ++ P P+ N  T  E G ++D  D        
Sbjct: 678  DVVFMEDHTIQDIEKTNPMESQHSGDLIDLDPAPLTNLPTQVEDGAHDDQHDMGDVETPT 737

Query: 1753 ----DLHDG--DGSDAESVDQGE--------QPDIEEPQ---LRRSTRERVPSIRYPSSE 1625
                + HD   D  D E+  Q E         P  E P    LRRSTR+R PS RY   +
Sbjct: 738  QVEDETHDDQHDMGDVETPTQVEVDDDVHEQSPTAEAPSDIPLRRSTRDRHPSTRYSVDD 797

Query: 1624 YLLVAEEGEPEDFQEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVF 1445
            Y+L+ +EGEPE + E    ++K  W+ AM+DEM+SLH+NH++E             +WV+
Sbjct: 798  YVLLTDEGEPESYVEAMKDENKMKWVDAMRDEMESLHENHSFELVKLPKGKRALKNRWVY 857

Query: 1444 KLKKDGD-KLVKYKARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQL 1268
            ++K++      +YKARLVVK    K+                         S DLE++Q+
Sbjct: 858  RVKQEEHTSQPRYKARLVVKRVQSKE-------------------------SFDLEIQQM 892

Query: 1267 DVKTAFLHGDLKEEIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQ 1088
            DVKTAFLHGDL +EIYMEQPEGF +KGKE  VCKLKKSLYGLKQAPRQWY KF+S M +Q
Sbjct: 893  DVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQAPRQWYKKFESVMGEQ 952

Query: 1087 GYSRTIADHCVYVKRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPA 908
            GY +T +DHCV+V++F D +FVILLLYVDD+LIV ++   I  LK +L KSF MKDLGP 
Sbjct: 953  GYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDNLKKQLSKSFAMKDLGPV 1012

Query: 907  KQILGMKIVRDRKAKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKE 728
            K+ILG++I RDR +K+L + QE+Y+E+V ARFNMS  K VS+PLASH KL+    PST +
Sbjct: 1013 KRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSPLASHFKLSSRHSPSTDK 1072

Query: 727  GRDDMAAVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKAT 548
             ++DM  VPY+SA+GSLMYAMVCTRPDIA+AVGVVSR+LSNPGR HWEAVKWI+RYL+ T
Sbjct: 1073 EKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHHWEAVKWIMRYLRGT 1132

Query: 547  SSLCLVFGSTSPVLEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTE 371
            S L L FGS  P+L G+TD+D+AG  + ++STSGYL TF+GGAV WQS+LQKCVALSTTE
Sbjct: 1133 SKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSWQSRLQKCVALSTTE 1192

Query: 370  SEYIAATEAGKEMLWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYH 191
            +EYIAA EA KE+LW+K F+QELG KQ  YVVYCD+QSAI L+KN+TYH R+KHIDVRYH
Sbjct: 1193 AEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNSTYHARSKHIDVRYH 1252

Query: 190  WLRXXXXXXXXXXXXVHTDENPSDMLTKVVTRDKQEFCKELVGMDS 53
            W+R            +HTD N SDMLTK + R+K   C  + GM S
Sbjct: 1253 WMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVCCSIAGMIS 1298


>CAN65281.1 hypothetical protein VITISV_035564 [Vitis vinifera]
          Length = 809

 Score =  616 bits (1588), Expect = 0.0
 Identities = 310/516 (60%), Positives = 387/516 (75%), Gaps = 2/516 (0%)
 Frame = -2

Query: 1594 EDFQEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDGDKLV 1415
            E   E    ++K  W+ AMQDEM SLH+N +YE             KWV+++K++     
Sbjct: 291  EKTDEAMGDENKIKWVDAMQDEMKSLHENISYEFIKLPNEKRALKNKWVYRVKQEEHASQ 350

Query: 1414 K-YKARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGD 1238
              YKA+LVVKGF Q +GIDFDEIFSPVVKM+ IRVVLGL AS+DLE+EQ+DVKT FLHGD
Sbjct: 351  PCYKAKLVVKGFIQNKGIDFDEIFSPVVKMSFIRVVLGLAASLDLEIEQMDVKTTFLHGD 410

Query: 1237 LKEEIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHC 1058
            L +EIYMEQ EGF +KGKE   CKLKKSLYGLKQAPRQWY KF+S M +QGY +T ++HC
Sbjct: 411  LDKEIYMEQLEGFIIKGKEDYACKLKKSLYGLKQAPRQWYKKFESVMGEQGYKKTTSNHC 470

Query: 1057 VYVKRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVR 878
            V+V +F D +FVILLLYVDD+LIVG++   I +LK +L KSF MKDLGP K+ILG++I R
Sbjct: 471  VFVHKFSDDDFVILLLYVDDILIVGRNVSRIDKLKKQLSKSFSMKDLGPVKKILGIRIER 530

Query: 877  DRKAKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPY 698
            DR +K+L++SQE+Y+E+VL RFNMS AK V++PLASH KL++   PS  + ++DM  VPY
Sbjct: 531  DRASKKLYMSQEQYIEKVLERFNMSKAKVVNSPLASHFKLSRRHSPSIDKEKEDMRRVPY 590

Query: 697  SSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGST 518
            +SAVGSLM  MVCTRPDIA+ +GVVSR+LSNPGR HWEAVKWI+RYL+ TS L L F S 
Sbjct: 591  ASAVGSLMNPMVCTRPDIAYVIGVVSRFLSNPGRLHWEAVKWIMRYLQGTSKLKLTFESG 650

Query: 517  SPVLEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAG 341
             PVL  +TD+++AG  + +  T GYL TF+GGAV WQS+LQK VALSTTE+EYIAA EA 
Sbjct: 651  KPVLVSYTDSNMAGDVDNRRPTLGYLMTFSGGAVFWQSRLQKSVALSTTEAEYIAAAEAC 710

Query: 340  KEMLWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXX 161
            KE+LW+KRF+ ELG KQ  YVVYCD+QS I L+KN+ +H R+KHIDVRYHW+R       
Sbjct: 711  KELLWMKRFIHELGFKQQRYVVYCDNQSVIHLSKNSIFHARSKHIDVRYHWMRDALNDNL 770

Query: 160  XXXXXVHTDENPSDMLTKVVTRDKQEFCKELVGMDS 53
                 +H D N SDMLTK + ++K E C  +  M S
Sbjct: 771  FELEKIHIDHNGSDMLTKSLPKEKLEVCCSIAEMAS 806


>KYP68590.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 523

 Score =  605 bits (1560), Expect = 0.0
 Identities = 303/522 (58%), Positives = 379/522 (72%), Gaps = 1/522 (0%)
 Frame = -2

Query: 1621 LLVAEEGEPEDFQEVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFK 1442
            +L+ + GEPED+ E     D   W  AM+DEM SL  N T+E             KWV++
Sbjct: 1    MLLTDGGEPEDYDEACQATDASKWEHAMKDEMKSLISNQTWELVELPRDKKALHNKWVYR 60

Query: 1441 LKKDGDKLVKYKARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDV 1262
            +K++ D   +YKARLVVKGF QK+G+D+ EI+SPVVK+ +IR VL +VAS +L LEQLDV
Sbjct: 61   VKEEHDGSKRYKARLVVKGFQQKEGVDYTEIYSPVVKLNTIRTVLSIVASEELYLEQLDV 120

Query: 1261 KTAFLHGDLKEEIYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGY 1082
            KTAFLHGDL EEIYM QPEGF  KGKE++VC+LKKSLYGLKQAPRQWY KFD FM  +G+
Sbjct: 121  KTAFLHGDLDEEIYMHQPEGFSEKGKENMVCRLKKSLYGLKQAPRQWYKKFDGFMHKEGF 180

Query: 1081 SRTIADHCVYVKRFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQ 902
             +  ADHC Y KR+   +++ILLLYVDDML+ G D D IR LK  L + FDMKDLGPAK+
Sbjct: 181  HKCNADHCCYFKRYKS-SYIILLLYVDDMLVAGLDMDEIRSLKQRLSREFDMKDLGPAKK 239

Query: 901  ILGMKIVRDRKAKRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGR 722
            ILGM+I RD++   L LSQ +Y+ RVL RFNM DAKPVSTPLASH +L+K   P T+E R
Sbjct: 240  ILGMQITRDKQRGILQLSQAEYINRVLQRFNMGDAKPVSTPLASHFRLSKDQSPQTEEER 299

Query: 721  DDMAAVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSS 542
              MA VPY+SA+GSLMYAMVCTRPDI HAVGVVSR++SNPG+ HWEAVKWILRYL+ T+ 
Sbjct: 300  YFMAKVPYASAIGSLMYAMVCTRPDIGHAVGVVSRFMSNPGKAHWEAVKWILRYLRGTTE 359

Query: 541  LCLVFGSTSPVLEGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESE 365
             CL FG     ++G+ DAD  G  + + ST+GY+FT    AV W S++QK VALSTTE+E
Sbjct: 360  RCLHFGKGKIKVQGYVDADYGGEVDHRRSTTGYIFTVGTTAVSWMSQVQKIVALSTTEAE 419

Query: 364  YIAATEAGKEMLWLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWL 185
            Y+A TEA KE++WL+  L ELG  Q++ V++ DSQSAI L KN+ +H+RTKHID+RYH++
Sbjct: 420  YVAVTEASKELIWLQGLLTELGFIQEKSVLHSDSQSAIHLAKNSAFHSRTKHIDIRYHFI 479

Query: 184  RXXXXXXXXXXXXVHTDENPSDMLTKVVTRDKQEFCKELVGM 59
            R            +    NP+DMLTKVVT DK + C   VG+
Sbjct: 480  RSLLEDEVLTLKKILGSRNPADMLTKVVTIDKLKLCSTSVGL 521


>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  631 bits (1627), Expect = 0.0
 Identities = 307/570 (53%), Positives = 419/570 (73%), Gaps = 8/570 (1%)
 Frame = -2

Query: 1744 DGDGSDAESVDQGEQPDIEEPQLRRSTRE-RVPS-----IRYPSSEYLLVAEEGEPEDFQ 1583
            + D S+AE V + ++PD     +RRSTR+ + PS     +      Y L+ EEGEP  F 
Sbjct: 733  ESDSSEAEPVHEEQEPDDVNNGVRRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFH 792

Query: 1582 EVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDG-DKLVKYK 1406
            E     D   W+ AM +EM++LH+N T+E             KWV+K+K+DG D++ +Y+
Sbjct: 793  EALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYR 852

Query: 1405 ARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEE 1226
            ARLVVKG+AQK+GIDF+EIFSPVV++T+IRVVL + A++DL LEQLDVKTAFLHG+L+EE
Sbjct: 853  ARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEE 912

Query: 1225 IYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVK 1046
            IYM QPEGF+ +GKE+LVC+L KSLYGLKQAPR WY +FDSF++   YSR  +DHC Y K
Sbjct: 913  IYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYK 972

Query: 1045 RFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKA 866
            RF   +F+ILLLYVDDML+VG + D ++ LK +L + FDMKDLGPA +ILGM+I RDRK 
Sbjct: 973  RFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKD 1032

Query: 865  KRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAV 686
            +++WLSQ+ Y+ +VL RFNM D KP+STPL  + KL+  M PS +  R +M+ VPY+SAV
Sbjct: 1033 RKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAV 1092

Query: 685  GSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVL 506
            GSLMYAM+CTRPDIA AVGVVSR++++PG+EHW AVK I+RY+K TS + + FG +   +
Sbjct: 1093 GSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTV 1152

Query: 505  EGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEML 329
             G+ D+D AG  ++++ST+GY+FT AGGAV W SKLQ  VALSTTE+EY+AAT+A KE +
Sbjct: 1153 RGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAI 1212

Query: 328  WLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXX 149
            W++R ++ELG KQ++  VYCDSQSA+ + +N  +H+RTKHI V+YH++R           
Sbjct: 1213 WMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQ 1272

Query: 148  XVHTDENPSDMLTKVVTRDKQEFCKELVGM 59
             +HT++N +D +TK +  DK  +C+ L G+
Sbjct: 1273 KIHTNDNLADAMTKSINTDKFIWCRSLYGL 1302


>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  631 bits (1627), Expect = 0.0
 Identities = 307/570 (53%), Positives = 419/570 (73%), Gaps = 8/570 (1%)
 Frame = -2

Query: 1744 DGDGSDAESVDQGEQPDIEEPQLRRSTRE-RVPS-----IRYPSSEYLLVAEEGEPEDFQ 1583
            + D S+AESV + ++PD     +RRSTR+ + PS     +      Y L+ EEGEP  F 
Sbjct: 733  ESDSSEAESVHEEQEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFH 792

Query: 1582 EVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDG-DKLVKYK 1406
            E     D   W+ AM +EM++LH+N T+E             KWV+K+K+DG D++ +Y+
Sbjct: 793  EALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYR 852

Query: 1405 ARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEE 1226
            ARLVVKG+AQK+GIDF+EIFSPVV++T+IRVVL + A++DL LEQLDVKTAFLHG+L+EE
Sbjct: 853  ARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEE 912

Query: 1225 IYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVK 1046
            IYM QPEGF+ +GKE+LVC+L KSLYGLKQAPR WY +FDSF++   YSR  +DHC Y K
Sbjct: 913  IYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYSRLSSDHCTYYK 972

Query: 1045 RFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKA 866
            RF   +F+ILLLYVDDML+VG + D ++ LK +L + FDMKDLGPA +ILGM+I RDRK 
Sbjct: 973  RFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKD 1032

Query: 865  KRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAV 686
             ++WLSQ+ Y+ +VL RFNM D KP+STPL  + KL+  M PS +  R +M+ VPY+SAV
Sbjct: 1033 MKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAV 1092

Query: 685  GSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVL 506
            GSLMYAM+CTRPDIA AVGVVSR++++PG+EHW AVK I+RY+K TS + + FG +   +
Sbjct: 1093 GSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTV 1152

Query: 505  EGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEML 329
             G+ D+D AG  ++++ST+GY+FT AGGAV W SKLQ  VALSTTE+EY+AAT+A KE +
Sbjct: 1153 RGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAI 1212

Query: 328  WLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXX 149
            W++R ++ELG KQ++  VYCDSQSA+ + +N  +H+RTKHI V+YH++R           
Sbjct: 1213 WMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQ 1272

Query: 148  XVHTDENPSDMLTKVVTRDKQEFCKELVGM 59
             +HT++N +D++TK +  DK  +C+   G+
Sbjct: 1273 KIHTNDNLADVMTKPINADKFVWCRSSYGL 1302


>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  630 bits (1624), Expect = 0.0
 Identities = 306/570 (53%), Positives = 420/570 (73%), Gaps = 8/570 (1%)
 Frame = -2

Query: 1744 DGDGSDAESVDQGEQPDIEEPQLRRSTRE-RVPS-----IRYPSSEYLLVAEEGEPEDFQ 1583
            + D S+AESV + ++PD     +RRSTR+ + PS     +      Y L+ EEGEP  F 
Sbjct: 733  ESDSSEAESVHEEQEPDDVNDGVRRSTRQTQKPSWQSDYVMTSHDAYCLITEEGEPSTFH 792

Query: 1582 EVKTHKDKGNWLRAMQDEMDSLHKNHTYEXXXXXXXXXXXXXKWVFKLKKDG-DKLVKYK 1406
            E     D   W+ AM +EM++LH+N T+E             KWV+K+K+DG D++ +Y+
Sbjct: 793  EALNGSDASQWMTAMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYR 852

Query: 1405 ARLVVKGFAQKQGIDFDEIFSPVVKMTSIRVVLGLVASMDLELEQLDVKTAFLHGDLKEE 1226
            ARLVVKG+AQK+GIDF+EIFSPVV++T+IRVVL + A++DL LEQLDVKTAFLHG+L+EE
Sbjct: 853  ARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGELEEE 912

Query: 1225 IYMEQPEGFEVKGKEHLVCKLKKSLYGLKQAPRQWYMKFDSFMVDQGYSRTIADHCVYVK 1046
            IYM QPEGF+ +GKE+LVC+L KSLYGLKQAPR WY +FDSF++   Y+R  +DHC Y K
Sbjct: 913  IYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYK 972

Query: 1045 RFPDGNFVILLLYVDDMLIVGQDADMIRRLKGELFKSFDMKDLGPAKQILGMKIVRDRKA 866
            RF   +F+ILLLYVDDML+VG + D ++ LK +L + FDMKDLGPA +ILGM+I RDRK 
Sbjct: 973  RFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKD 1032

Query: 865  KRLWLSQEKYVERVLARFNMSDAKPVSTPLASHIKLTKCMCPSTKEGRDDMAAVPYSSAV 686
            +++WLSQ+ Y+ +VL RFNM D KP+STPL  + KL+  M PS +  R +M+ VPY+SAV
Sbjct: 1033 RKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAV 1092

Query: 685  GSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILRYLKATSSLCLVFGSTSPVL 506
            GSLMYAM+CTRPDIA AVGVVSR++++PG+EHW AVK I+RY+K TS + + FG +   +
Sbjct: 1093 GSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVAVCFGGSELTV 1152

Query: 505  EGFTDADIAG-FEEKESTSGYLFTFAGGAVLWQSKLQKCVALSTTESEYIAATEAGKEML 329
             G+ D+D AG  ++++ST+GY+FT AGGAV W SKLQ  VALSTTE+EY+AAT+A KE +
Sbjct: 1153 WGYVDSDFAGDHDKRKSTTGYVFTLAGGAVSWLSKLQTVVALSTTEAEYMAATQACKEAI 1212

Query: 328  WLKRFLQELGLKQDEYVVYCDSQSAIDLTKNATYHNRTKHIDVRYHWLRXXXXXXXXXXX 149
            W++R ++ELG KQ++  VYCDSQSA+ + +N  +H+RTKHI V+YH++R           
Sbjct: 1213 WMQRLMEELGHKQEQITVYCDSQSALHIARNPAFHSRTKHIGVQYHFVREVVEEGSVDMQ 1272

Query: 148  XVHTDENPSDMLTKVVTRDKQEFCKELVGM 59
             +HT++N +D++TK +  DK  +C+   G+
Sbjct: 1273 KIHTNDNLADVMTKPINTDKFVWCRSSYGL 1302