BLASTX nr result
ID: Panax24_contig00016984
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00016984 (2037 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KZV17233.1 paired amphipathic helix protein Sin3-like 2-like [Do... 51 3e-07 XP_017241836.1 PREDICTED: paired amphipathic helix protein Sin3-... 52 2e-06 KZN02429.1 hypothetical protein DCAR_011183 [Daucus carota subsp... 52 2e-06 CDP02173.1 unnamed protein product [Coffea canephora] 53 5e-06 KVI02470.1 Histone deacetylase interacting [Cynara cardunculus v... 53 7e-06 >KZV17233.1 paired amphipathic helix protein Sin3-like 2-like [Dorcoceras hygrometricum] Length = 963 Score = 51.2 bits (121), Expect(2) = 3e-07 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -1 Query: 1530 THDYQAFLKCLHIYSTEIITRKELQGLL 1447 T YQ FLKCLHIYSTEIITRKELQGL+ Sbjct: 32 TDVYQEFLKCLHIYSTEIITRKELQGLV 59 Score = 33.9 bits (76), Expect(2) = 3e-07 Identities = 16/28 (57%), Positives = 18/28 (64%) Frame = -3 Query: 1609 NMLCSISPVVYKQEFALCEIVK*RLRNT 1526 N LC I P +Y EF CE VK RLR+T Sbjct: 5 NSLCLILPGIYCHEFTFCEKVKERLRST 32 >XP_017241836.1 PREDICTED: paired amphipathic helix protein Sin3-like 2 [Daucus carota subsp. sativus] Length = 1320 Score = 52.0 bits (123), Expect(2) = 2e-06 Identities = 23/26 (88%), Positives = 25/26 (96%) Frame = -1 Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447 DYQAFLKCLHIYST+IITR ELQGL+ Sbjct: 349 DYQAFLKCLHIYSTDIITRNELQGLV 374 Score = 30.0 bits (66), Expect(2) = 2e-06 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -3 Query: 1582 VYKQEFALCEIVK*RLRN 1529 +YKQEF CE VK RLRN Sbjct: 329 IYKQEFIFCEKVKERLRN 346 >KZN02429.1 hypothetical protein DCAR_011183 [Daucus carota subsp. sativus] Length = 1281 Score = 52.0 bits (123), Expect(2) = 2e-06 Identities = 23/26 (88%), Positives = 25/26 (96%) Frame = -1 Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447 DYQAFLKCLHIYST+IITR ELQGL+ Sbjct: 349 DYQAFLKCLHIYSTDIITRNELQGLV 374 Score = 30.0 bits (66), Expect(2) = 2e-06 Identities = 13/18 (72%), Positives = 14/18 (77%) Frame = -3 Query: 1582 VYKQEFALCEIVK*RLRN 1529 +YKQEF CE VK RLRN Sbjct: 329 IYKQEFIFCEKVKERLRN 346 >CDP02173.1 unnamed protein product [Coffea canephora] Length = 1370 Score = 52.8 bits (125), Expect(2) = 5e-06 Identities = 24/26 (92%), Positives = 25/26 (96%) Frame = -1 Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447 DYQAFLKCLHIYSTEIITRKELQ L+ Sbjct: 367 DYQAFLKCLHIYSTEIITRKELQSLV 392 Score = 28.1 bits (61), Expect(2) = 5e-06 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = -3 Query: 1582 VYKQEFALCEIVK*RLRN 1529 +Y QEF+ CE VK RLRN Sbjct: 347 MYSQEFSFCEKVKERLRN 364 >KVI02470.1 Histone deacetylase interacting [Cynara cardunculus var. scolymus] Length = 1140 Score = 52.8 bits (125), Expect(2) = 7e-06 Identities = 24/26 (92%), Positives = 25/26 (96%) Frame = -1 Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447 DYQAFLKCLHIYSTEIITRKELQ L+ Sbjct: 350 DYQAFLKCLHIYSTEIITRKELQSLV 375 Score = 27.7 bits (60), Expect(2) = 7e-06 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -3 Query: 1582 VYKQEFALCEIVK*RLRN 1529 +Y QEF CE VK RLRN Sbjct: 330 MYSQEFTFCENVKNRLRN 347