BLASTX nr result

ID: Panax24_contig00016984 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00016984
         (2037 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZV17233.1 paired amphipathic helix protein Sin3-like 2-like [Do...    51   3e-07
XP_017241836.1 PREDICTED: paired amphipathic helix protein Sin3-...    52   2e-06
KZN02429.1 hypothetical protein DCAR_011183 [Daucus carota subsp...    52   2e-06
CDP02173.1 unnamed protein product [Coffea canephora]                  53   5e-06
KVI02470.1 Histone deacetylase interacting [Cynara cardunculus v...    53   7e-06

>KZV17233.1 paired amphipathic helix protein Sin3-like 2-like [Dorcoceras
            hygrometricum]
          Length = 963

 Score = 51.2 bits (121), Expect(2) = 3e-07
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -1

Query: 1530 THDYQAFLKCLHIYSTEIITRKELQGLL 1447
            T  YQ FLKCLHIYSTEIITRKELQGL+
Sbjct: 32   TDVYQEFLKCLHIYSTEIITRKELQGLV 59



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 16/28 (57%), Positives = 18/28 (64%)
 Frame = -3

Query: 1609 NMLCSISPVVYKQEFALCEIVK*RLRNT 1526
            N LC I P +Y  EF  CE VK RLR+T
Sbjct: 5    NSLCLILPGIYCHEFTFCEKVKERLRST 32


>XP_017241836.1 PREDICTED: paired amphipathic helix protein Sin3-like 2 [Daucus
            carota subsp. sativus]
          Length = 1320

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -1

Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447
            DYQAFLKCLHIYST+IITR ELQGL+
Sbjct: 349  DYQAFLKCLHIYSTDIITRNELQGLV 374



 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -3

Query: 1582 VYKQEFALCEIVK*RLRN 1529
            +YKQEF  CE VK RLRN
Sbjct: 329  IYKQEFIFCEKVKERLRN 346


>KZN02429.1 hypothetical protein DCAR_011183 [Daucus carota subsp. sativus]
          Length = 1281

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -1

Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447
            DYQAFLKCLHIYST+IITR ELQGL+
Sbjct: 349  DYQAFLKCLHIYSTDIITRNELQGLV 374



 Score = 30.0 bits (66), Expect(2) = 2e-06
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -3

Query: 1582 VYKQEFALCEIVK*RLRN 1529
            +YKQEF  CE VK RLRN
Sbjct: 329  IYKQEFIFCEKVKERLRN 346


>CDP02173.1 unnamed protein product [Coffea canephora]
          Length = 1370

 Score = 52.8 bits (125), Expect(2) = 5e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -1

Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447
            DYQAFLKCLHIYSTEIITRKELQ L+
Sbjct: 367  DYQAFLKCLHIYSTEIITRKELQSLV 392



 Score = 28.1 bits (61), Expect(2) = 5e-06
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 1582 VYKQEFALCEIVK*RLRN 1529
            +Y QEF+ CE VK RLRN
Sbjct: 347  MYSQEFSFCEKVKERLRN 364


>KVI02470.1 Histone deacetylase interacting [Cynara cardunculus var. scolymus]
          Length = 1140

 Score = 52.8 bits (125), Expect(2) = 7e-06
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = -1

Query: 1524 DYQAFLKCLHIYSTEIITRKELQGLL 1447
            DYQAFLKCLHIYSTEIITRKELQ L+
Sbjct: 350  DYQAFLKCLHIYSTEIITRKELQSLV 375



 Score = 27.7 bits (60), Expect(2) = 7e-06
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 1582 VYKQEFALCEIVK*RLRN 1529
            +Y QEF  CE VK RLRN
Sbjct: 330  MYSQEFTFCENVKNRLRN 347


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