BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00016873
         (499 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017258175.1 PREDICTED: sm-like protein LSM1B [Daucus carota s...   137   1e-38
XP_004303709.1 PREDICTED: sm-like protein LSM1B [Fragaria vesca ...   135   5e-38
OMO66134.1 hypothetical protein COLO4_30725 [Corchorus olitorius]     134   1e-37
OAY53239.1 hypothetical protein MANES_04G147400 [Manihot esculenta]   134   1e-37
XP_011036474.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   134   1e-37
XP_002304120.1 small nuclear ribonucleoprotein [Populus trichoca...   134   1e-37
XP_002271476.1 PREDICTED: sm-like protein LSM1B [Vitis vinifera]...   134   2e-37
XP_019196450.1 PREDICTED: sm-like protein LSM1B [Ipomoea nil]         133   3e-37
XP_018835043.1 PREDICTED: sm-like protein LSM1B [Juglans regia]       133   3e-37
XP_011012019.1 PREDICTED: probable U6 snRNA-associated Sm-like p...   133   3e-37
XP_018839212.1 PREDICTED: sm-like protein LSM1B [Juglans regia]       133   4e-37
XP_006369123.1 small nuclear ribonucleoprotein [Populus trichoca...   133   4e-37
XP_015902522.1 PREDICTED: sm-like protein LSM1B [Ziziphus jujuba]     132   6e-37
XP_002532727.1 PREDICTED: sm-like protein LSM1B [Ricinus communi...   132   6e-37
OAY36383.1 hypothetical protein MANES_11G017100 [Manihot esculenta]   132   1e-36
XP_016459285.1 PREDICTED: sm-like protein LSM1B [Nicotiana tabacum]   132   1e-36
XP_009622144.1 PREDICTED: sm-like protein LSM1B [Nicotiana tomen...   131   2e-36
XP_008380788.1 PREDICTED: sm-like protein LSM1B [Malus domestica...   131   2e-36
XP_010322823.1 PREDICTED: sm-like protein LSM1B isoform X2 [Sola...   131   2e-36
XP_006357408.1 PREDICTED: sm-like protein LSM1B [Solanum tuberosum]   131   2e-36

>XP_017258175.1 PREDICTED: sm-like protein LSM1B [Daucus carota subsp. sativus]
          Length = 128

 Score =  137 bits (344), Expect = 1e-38
 Identities = 66/71 (92%), Positives = 70/71 (98%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           GE+YCDI LGLY+IRGENVVLIGELDLEK+ELPPHMTRVSPAEIKRAQKAEREA+DLKGT
Sbjct: 58  GEIYCDIPLGLYIIRGENVVLIGELDLEKDELPPHMTRVSPAEIKRAQKAEREASDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128


>XP_004303709.1 PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
          Length = 128

 Score =  135 bits (340), Expect = 5e-38
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           GELYCD+ LGLYVIRGENVVLIGELD E+EELPPHMTRVSPAEIKRAQKAEREA+DLKGT
Sbjct: 58  GELYCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128


>OMO66134.1 hypothetical protein COLO4_30725 [Corchorus olitorius]
          Length = 128

 Score =  134 bits (337), Expect = 1e-37
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKGT
Sbjct: 58  GDLYCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIKRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>OAY53239.1 hypothetical protein MANES_04G147400 [Manihot esculenta]
          Length = 128

 Score =  134 bits (337), Expect = 1e-37
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKGT
Sbjct: 58  GDLYCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIKRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_011036474.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
           [Populus euphratica]
          Length = 128

 Score =  134 bits (337), Expect = 1e-37
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKGT
Sbjct: 58  GDLYCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_002304120.1 small nuclear ribonucleoprotein [Populus trichocarpa] EEE79099.1
           small nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score =  134 bits (337), Expect = 1e-37
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKGT
Sbjct: 58  GDLYCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_002271476.1 PREDICTED: sm-like protein LSM1B [Vitis vinifera] CAN62239.1
           hypothetical protein VITISV_033727 [Vitis vinifera]
           CBI35847.3 unnamed protein product, partial [Vitis
           vinifera]
          Length = 128

 Score =  134 bits (336), Expect = 2e-37
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLEKEELPPHMTRVS AEIKRAQKAEREA+DLKGT
Sbjct: 58  GDLYCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_019196450.1 PREDICTED: sm-like protein LSM1B [Ipomoea nil]
          Length = 128

 Score =  133 bits (335), Expect = 3e-37
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLY+IRGENVVLIGELDL+KEELPPHMTRVS AEIKRAQK EREATDLKGT
Sbjct: 58  GDLYCDIPLGLYIIRGENVVLIGELDLDKEELPPHMTRVSEAEIKRAQKVEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128


>XP_018835043.1 PREDICTED: sm-like protein LSM1B [Juglans regia]
          Length = 128

 Score =  133 bits (335), Expect = 3e-37
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           GELYCDI LGLY+IRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKG+
Sbjct: 58  GELYCDIPLGLYIIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGS 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_011012019.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
           [Populus euphratica]
          Length = 128

 Score =  133 bits (335), Expect = 3e-37
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEI+RAQKAEREATDLKGT
Sbjct: 58  GDLYCDIQLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_018839212.1 PREDICTED: sm-like protein LSM1B [Juglans regia]
          Length = 128

 Score =  133 bits (334), Expect = 4e-37
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLY+IRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKG+
Sbjct: 58  GDLYCDITLGLYIIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGS 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_006369123.1 small nuclear ribonucleoprotein [Populus trichocarpa] ABK96777.1
           unknown [Populus trichocarpa x Populus deltoides]
           ERP65692.1 small nuclear ribonucleoprotein [Populus
           trichocarpa]
          Length = 128

 Score =  133 bits (334), Expect = 4e-37
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEI+RAQKAEREATDLKGT
Sbjct: 58  GDLYCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_015902522.1 PREDICTED: sm-like protein LSM1B [Ziziphus jujuba]
          Length = 128

 Score =  132 bits (333), Expect = 6e-37
 Identities = 65/71 (91%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEIKRAQKAEREATDLKG+
Sbjct: 58  GDLYCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIKRAQKAEREATDLKGS 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>XP_002532727.1 PREDICTED: sm-like protein LSM1B [Ricinus communis] EEF29658.1
           lsm1, putative [Ricinus communis]
          Length = 128

 Score =  132 bits (333), Expect = 6e-37
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLY+IRGENVVLIGELDLEKEELPPHMTRVS AEI+RAQKAER+ATDLKGT
Sbjct: 58  GDLYCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLD+D
Sbjct: 118 MRKRMEFLDLD 128


>OAY36383.1 hypothetical protein MANES_11G017100 [Manihot esculenta]
          Length = 128

 Score =  132 bits (331), Expect = 1e-36
 Identities = 64/71 (90%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELDLE+EELPPHMTRVS AEI+RAQKAEREATDLKGT
Sbjct: 58  GDLYCDIPLGLYVIRGENVVLIGELDLEREELPPHMTRVSAAEIRRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MR+RMEFLD+D
Sbjct: 118 MRRRMEFLDLD 128


>XP_016459285.1 PREDICTED: sm-like protein LSM1B [Nicotiana tabacum]
          Length = 128

 Score =  132 bits (331), Expect = 1e-36
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLY+IRGENVVLIGELD++KEELPPHMTRVS AEI+RAQKAER+ATDLKGT
Sbjct: 58  GDLYCDIPLGLYIIRGENVVLIGELDIDKEELPPHMTRVSEAEIRRAQKAERDATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128


>XP_009622144.1 PREDICTED: sm-like protein LSM1B [Nicotiana tomentosiformis]
           XP_016506884.1 PREDICTED: sm-like protein LSM1B
           [Nicotiana tabacum] XP_019230090.1 PREDICTED: sm-like
           protein LSM1B [Nicotiana attenuata] OIT29674.1 sm-like
           protein lsm1b [Nicotiana attenuata]
          Length = 128

 Score =  131 bits (330), Expect = 2e-36
 Identities = 63/71 (88%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLY+IRGENVVLIGELD++KEELPPHMTRVS AEI+RAQKAER+ATDLKGT
Sbjct: 58  GDLYCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128


>XP_008380788.1 PREDICTED: sm-like protein LSM1B [Malus domestica] XP_008341819.1
           PREDICTED: sm-like protein LSM1B [Malus domestica]
           XP_009350857.1 PREDICTED: sm-like protein LSM1B [Pyrus x
           bretschneideri]
          Length = 128

 Score =  131 bits (330), Expect = 2e-36
 Identities = 65/71 (91%), Positives = 68/71 (95%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           G+LYCDI LGLYVIRGENVVLIGELD E+EELPPHMTRVS AEIKRAQKAEREA+DLKGT
Sbjct: 58  GDLYCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKRAQKAEREASDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128


>XP_010322823.1 PREDICTED: sm-like protein LSM1B isoform X2 [Solanum lycopersicum]
          Length = 119

 Score =  131 bits (329), Expect = 2e-36
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           GE+YCDI LGLY+IRGENVVLIGELD++KEELPPHMTRV  AEI+RAQKAEREATDLKGT
Sbjct: 49  GEIYCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGT 108

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 109 MRKRMEFLDMD 119


>XP_006357408.1 PREDICTED: sm-like protein LSM1B [Solanum tuberosum]
          Length = 128

 Score =  131 bits (329), Expect = 2e-36
 Identities = 63/71 (88%), Positives = 68/71 (95%)
 Frame = +3

Query: 3   GELYCDILLGLYVIRGENVVLIGELDLEKEELPPHMTRVSPAEIKRAQKAEREATDLKGT 182
           GE+YCDI LGLY+IRGENVVLIGELD++KEELPPHMTRV  AEI+RAQKAEREATDLKGT
Sbjct: 58  GEIYCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGT 117

Query: 183 MRKRMEFLDMD 215
           MRKRMEFLDMD
Sbjct: 118 MRKRMEFLDMD 128