BLASTX nr result

ID: Panax24_contig00016368 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00016368
         (380 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017220181.1 PREDICTED: probable arabinosyltransferase ARAD1 [...    48   3e-09
XP_002284930.2 PREDICTED: probable arabinosyltransferase ARAD1 [...    50   1e-06
XP_017251552.1 PREDICTED: probable arabinosyltransferase ARAD1 [...    45   7e-06
KZM93310.1 hypothetical protein DCAR_016555 [Daucus carota subsp...    45   7e-06

>XP_017220181.1 PREDICTED: probable arabinosyltransferase ARAD1 [Daucus carota
           subsp. sativus] XP_017220182.1 PREDICTED: probable
           arabinosyltransferase ARAD1 [Daucus carota subsp.
           sativus] XP_017220183.1 PREDICTED: probable
           arabinosyltransferase ARAD1 [Daucus carota subsp.
           sativus]
          Length = 472

 Score = 48.1 bits (113), Expect(2) = 3e-09
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
 Frame = +2

Query: 128 SFIPTVFKIIDDNSTSVYFRPDLRSKHTRXXXXXXXXXXXXXXXXTRSQEIIYQNSISSK 307
           S +P+VF II+ NS+SVYFRP++RS+H                        I +  ++S 
Sbjct: 40  SLVPSVFNIININSSSVYFRPNVRSEH------------------------IQKPPLASP 75

Query: 308 MHTLEQDKEK-ICYPNQAILRVFMY 379
           + T E  + + IC  N A+LRV+MY
Sbjct: 76  ILTTEPTRSQGICNVNHAVLRVYMY 100



 Score = 40.4 bits (93), Expect(2) = 3e-09
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +3

Query: 27  KKNMLLSRLFSCLIAVSMFLLFFPRLWYFDSVTIPL 134
           +K+++LSRLFSCLIA+SM LL F  L+ F    I L
Sbjct: 6   EKSLVLSRLFSCLIAISMLLLIFSTLFLFQFNEISL 41


>XP_002284930.2 PREDICTED: probable arabinosyltransferase ARAD1 [Vitis vinifera]
          Length = 498

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = +2

Query: 122 DNSFIP-TVFKIIDDNSTSVYFRPDLRSKHTRXXXXXXXXXXXXXXXXTRSQEIIYQNSI 298
           + SFIP +VFK+I  NSTSVYF+   +++ T+                   +     ++ 
Sbjct: 35  NTSFIPNSVFKLILVNSTSVYFKSSGKNEQTKLPFVTSVASPVDSKRPMGREGSCQISNA 94

Query: 299 SSKMHTLEQDKEKICYPNQAILRVFMY 379
           S KM  L Q + K C PNQA LR FMY
Sbjct: 95  SKKMDALGQGRRKGCDPNQAHLRAFMY 121



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 27  KKNMLLSRLFSCLIAVSMFLLFFPRLW 107
           +K+ML SR   CLI +SMFLL    L+
Sbjct: 3   EKSMLPSRFLFCLITISMFLLILSSLF 29


>XP_017251552.1 PREDICTED: probable arabinosyltransferase ARAD1 [Daucus carota
           subsp. sativus]
          Length = 501

 Score = 45.4 bits (106), Expect(2) = 7e-06
 Identities = 28/86 (32%), Positives = 44/86 (51%)
 Frame = +2

Query: 122 DNSFIPTVFKIIDDNSTSVYFRPDLRSKHTRXXXXXXXXXXXXXXXXTRSQEIIYQNSIS 301
           DNSF+P   + +DD ++S YF  DLR   ++                  S E++ Q +  
Sbjct: 41  DNSFMPGGLESVDDYNSSEYFISDLRQSVSQTAETDTITPFSKKTEI--SDELVPQITDV 98

Query: 302 SKMHTLEQDKEKICYPNQAILRVFMY 379
            +  +L  D+ K+C P +AILRV+MY
Sbjct: 99  PRTVSLGYDEVKVCDPTRAILRVYMY 124



 Score = 31.6 bits (70), Expect(2) = 7e-06
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 30  KNMLLSRLFSCLIAVSMFLLFFPRLWYF 113
           K+ML SR F CLIAV+M LL F   + F
Sbjct: 10  KSMLPSRFFICLIAVAMCLLVFSSTFLF 37


>KZM93310.1 hypothetical protein DCAR_016555 [Daucus carota subsp. sativus]
          Length = 495

 Score = 45.4 bits (106), Expect(2) = 7e-06
 Identities = 28/86 (32%), Positives = 44/86 (51%)
 Frame = +2

Query: 122 DNSFIPTVFKIIDDNSTSVYFRPDLRSKHTRXXXXXXXXXXXXXXXXTRSQEIIYQNSIS 301
           DNSF+P   + +DD ++S YF  DLR   ++                  S E++ Q +  
Sbjct: 35  DNSFMPGGLESVDDYNSSEYFISDLRQSVSQTAETDTITPFSKKTEI--SDELVPQITDV 92

Query: 302 SKMHTLEQDKEKICYPNQAILRVFMY 379
            +  +L  D+ K+C P +AILRV+MY
Sbjct: 93  PRTVSLGYDEVKVCDPTRAILRVYMY 118



 Score = 31.6 bits (70), Expect(2) = 7e-06
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 30  KNMLLSRLFSCLIAVSMFLLFFPRLWYF 113
           K+ML SR F CLIAV+M LL F   + F
Sbjct: 4   KSMLPSRFFICLIAVAMCLLVFSSTFLF 31


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