BLASTX nr result

ID: Panax24_contig00016130 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00016130
         (538 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017223303.1 PREDICTED: uncharacterized protein LOC108199824 [...    58   5e-17
KZM85088.1 hypothetical protein DCAR_027490 [Daucus carota subsp...    58   2e-08

>XP_017223303.1 PREDICTED: uncharacterized protein LOC108199824 [Daucus carota
           subsp. sativus]
          Length = 674

 Score = 58.2 bits (139), Expect(2) = 5e-17
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = +3

Query: 402 PLGFLPPXXXXXXXXXXXXXXTDSMDWCVRARKIAVKSIESRGLT 536
           PLGFLPP              T++MDWCVRARK+AVKSIE+RGLT
Sbjct: 97  PLGFLPPKKRKEQKESKLLQDTENMDWCVRARKVAVKSIEARGLT 141



 Score = 56.6 bits (135), Expect(2) = 5e-17
 Identities = 33/72 (45%), Positives = 43/72 (59%)
 Frame = +2

Query: 161 MEAIMLNTFSPTPLCINSVAFNHPTSSTSTHNFYTRLPFKNSRFDFYSGRIYWGSRKNSY 340
           M++IML+TFSP PL +N +   +  SST      +R  F N RFDF   ++  G RKNS 
Sbjct: 1   MQSIMLHTFSPPPLSLNCLFSGYSASST-----ISRPRFINLRFDFCGRKLDLGFRKNSS 55

Query: 341 IANVGTKDYNSV 376
             NVGTKD + V
Sbjct: 56  AVNVGTKDISYV 67


>KZM85088.1 hypothetical protein DCAR_027490 [Daucus carota subsp. sativus]
          Length = 448

 Score = 58.2 bits (139), Expect(2) = 2e-08
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = +3

Query: 402 PLGFLPPXXXXXXXXXXXXXXTDSMDWCVRARKIAVKSIESRGLT 536
           PLGFLPP              T++MDWCVRARK+AVKSIE+RGLT
Sbjct: 308 PLGFLPPKKRKEQKESKLLQDTENMDWCVRARKVAVKSIEARGLT 352



 Score = 27.3 bits (59), Expect(2) = 2e-08
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 278 KNSRFDFYSGRIYWGSRKNSYIANVGTKDYNSV 376
           +  R +    ++  G RKNS   NVGTKD + V
Sbjct: 246 EEQRLELQGWKLDLGFRKNSSAVNVGTKDISYV 278


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