BLASTX nr result

ID: Panax24_contig00015045 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00015045
         (1134 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    89   2e-15
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    89   2e-15
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    89   2e-15
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp...    89   2e-15

>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
            subsp. sativus]
          Length = 1045

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = -3

Query: 445  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSAD 266
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS D
Sbjct: 654  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD 712

Query: 265  RKDKDCISGYGSMRNNFGWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 89
               K CISG+ +M  NFG  NC  SS +E SGL DY SSQ D  +F+VD++EYD  P   
Sbjct: 713  ---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 769

Query: 88   DEYSDEIKWLSLEACGKNRSMTGAEPS 8
            D +SD++K    +   +++  + A  S
Sbjct: 770  DFHSDKVKGSCSKPVDRDKGRSDAASS 796


>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
            subsp. sativus]
          Length = 1133

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = -3

Query: 445  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSAD 266
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS D
Sbjct: 654  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD 712

Query: 265  RKDKDCISGYGSMRNNFGWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 89
               K CISG+ +M  NFG  NC  SS +E SGL DY SSQ D  +F+VD++EYD  P   
Sbjct: 713  ---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 769

Query: 88   DEYSDEIKWLSLEACGKNRSMTGAEPS 8
            D +SD++K    +   +++  + A  S
Sbjct: 770  DFHSDKVKGSCSKPVDRDKGRSDAASS 796


>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
            subsp. sativus]
          Length = 1235

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = -3

Query: 445  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSAD 266
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS D
Sbjct: 654  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD 712

Query: 265  RKDKDCISGYGSMRNNFGWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 89
               K CISG+ +M  NFG  NC  SS +E SGL DY SSQ D  +F+VD++EYD  P   
Sbjct: 713  ---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 769

Query: 88   DEYSDEIKWLSLEACGKNRSMTGAEPS 8
            D +SD++K    +   +++  + A  S
Sbjct: 770  DFHSDKVKGSCSKPVDRDKGRSDAASS 796


>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
          Length = 1344

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
 Frame = -3

Query: 445  LSFGLS*SKLTQEITSKHVSFKCLTPNPFMKTILREAEHFIDEDLLEKNFKIASYDYSAD 266
            L  G    K     +S    + C+TP+   +T   EA+H +  D ++   K+ SY YS D
Sbjct: 758  LDLGNQFQKYGPRESSSKFGWSCVTPDSSAETKFMEADH-VSNDAVQDKCKMNSYHYSGD 816

Query: 265  RKDKDCISGYGSMRNNFGWGNCSTSSCME-SGLKDYGSSQGDIYNFQVDNLEYDLFPKCL 89
               K CISG+ +M  NFG  NC  SS +E SGL DY SSQ D  +F+VD++EYD  P   
Sbjct: 817  ---KGCISGFDNMGYNFGHLNCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVF 873

Query: 88   DEYSDEIKWLSLEACGKNRSMTGAEPS 8
            D +SD++K    +   +++  + A  S
Sbjct: 874  DFHSDKVKGSCSKPVDRDKGRSDAASS 900


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