BLASTX nr result

ID: Panax24_contig00014981 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00014981
         (364 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDY33857.1 BnaC06g04960D [Brassica napus]                              57   7e-08
KDO84672.1 hypothetical protein CISIN_1g031319mg [Citrus sinensis]     54   5e-07
KJB53603.1 hypothetical protein B456_009G198400 [Gossypium raimo...    54   6e-07
OMO75256.1 Ubiquitin-conjugating enzyme, E2 [Corchorus olitorius]      51   3e-06
AAC39327.1 ubiquitin-conjugating enzyme 18, partial [Arabidopsis...    51   5e-06
AQK63842.1 Ubiquitin-conjugating enzyme 15 [Zea mays]                  51   8e-06
NP_001323221.1 Ubiquitin-conjugating enzyme family protein [Arab...    51   8e-06
ONI32563.1 hypothetical protein PRUPE_1G373500 [Prunus persica]        51   8e-06
XP_017238067.1 PREDICTED: probable ubiquitin-conjugating enzyme ...    52   8e-06
XP_017255186.1 PREDICTED: probable ubiquitin-conjugating enzyme ...    52   8e-06
XP_009609661.1 PREDICTED: probable ubiquitin-conjugating enzyme ...    52   8e-06
AAF69157.1 F27F5.13 [Arabidopsis thaliana]                             51   9e-06

>CDY33857.1 BnaC06g04960D [Brassica napus]
          Length = 122

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLG----LSHCFVLELSTFMRLSLFACVFM 161
           V+F+PPAPLHPHIYSNGHICLG    +S CF      F  L L +  +M
Sbjct: 69  VIFVPPAPLHPHIYSNGHICLGISLSISFCFFTLCIMFFVLFLVSLCWM 117


>KDO84672.1 hypothetical protein CISIN_1g031319mg [Citrus sinensis]
          Length = 105

 Score = 53.9 bits (128), Expect = 5e-07
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGLS 98
           V+F+PPAPLHPHIYSNGHICLG++
Sbjct: 80  VIFLPPAPLHPHIYSNGHICLGIA 103


>KJB53603.1 hypothetical protein B456_009G198400 [Gossypium raimondii]
          Length = 124

 Score = 54.3 bits (129), Expect = 6e-07
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGL 95
           V+FIPPAPLHPHIYSNGHICLG+
Sbjct: 80  VIFIPPAPLHPHIYSNGHICLGM 102


>OMO75256.1 Ubiquitin-conjugating enzyme, E2 [Corchorus olitorius]
          Length = 72

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +3

Query: 27 VVFIPPAPLHPHIYSNGHICLGL 95
          V+F+PPAPLHPHIYSNGHICL +
Sbjct: 6  VIFVPPAPLHPHIYSNGHICLDI 28


>AAC39327.1 ubiquitin-conjugating enzyme 18, partial [Arabidopsis thaliana]
          Length = 97

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +3

Query: 27 VVFIPPAPLHPHIYSNGHICLGL 95
          V+F+PPAPLHPHIYSNGHICL +
Sbjct: 16 VIFVPPAPLHPHIYSNGHICLDI 38


>AQK63842.1 Ubiquitin-conjugating enzyme 15 [Zea mays]
          Length = 117

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 24/53 (45%), Positives = 32/53 (60%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGLSHCFVLELSTFMRLSLFACVFMAWLAHCFF 185
           V+F+ PAP+HPHIYSNGHICLG++  F   +  F   S   C+  +    C F
Sbjct: 48  VIFLHPAPMHPHIYSNGHICLGIAVNFYSPVDIFWTNS---CILSSPALGCSF 97


>NP_001323221.1 Ubiquitin-conjugating enzyme family protein [Arabidopsis thaliana]
           ANM60974.1 Ubiquitin-conjugating enzyme family protein
           [Arabidopsis thaliana]
          Length = 117

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGLSHCFVL 113
           VVF+ PAP HPHIYSNGHICLG++ C++L
Sbjct: 80  VVFVSPAPSHPHIYSNGHICLGIA-CYLL 107


>ONI32563.1 hypothetical protein PRUPE_1G373500 [Prunus persica]
          Length = 120

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICL 89
           V+FIPPAPLHPHIYSNGHICL
Sbjct: 80  VIFIPPAPLHPHIYSNGHICL 100


>XP_017238067.1 PREDICTED: probable ubiquitin-conjugating enzyme E2 18 [Daucus
           carota subsp. sativus]
          Length = 161

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGL 95
           VVFIPPAPLHPHIYSNGHICL +
Sbjct: 80  VVFIPPAPLHPHIYSNGHICLDI 102


>XP_017255186.1 PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Daucus
           carota subsp. sativus] KZM90182.1 hypothetical protein
           DCAR_022453 [Daucus carota subsp. sativus]
          Length = 161

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGL 95
           VVFIPPAPLHPHIYSNGHICL +
Sbjct: 80  VVFIPPAPLHPHIYSNGHICLDI 102


>XP_009609661.1 PREDICTED: probable ubiquitin-conjugating enzyme E2 18 [Nicotiana
           tomentosiformis] XP_016451876.1 PREDICTED: probable
           ubiquitin-conjugating enzyme E2 18 [Nicotiana tabacum]
           XP_019263587.1 PREDICTED: probable ubiquitin-conjugating
           enzyme E2 18 [Nicotiana attenuata] OIT37023.1 putative
           ubiquitin-conjugating enzyme e2 18 [Nicotiana attenuata]
          Length = 161

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGL 95
           VVFIPPAPLHPHIYSNGHICL +
Sbjct: 80  VVFIPPAPLHPHIYSNGHICLDI 102


>AAF69157.1 F27F5.13 [Arabidopsis thaliana]
          Length = 128

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = +3

Query: 27  VVFIPPAPLHPHIYSNGHICLGLSHCFVL 113
           VVF+ PAP HPHIYSNGHICLG++ C++L
Sbjct: 91  VVFVSPAPSHPHIYSNGHICLGIA-CYLL 118


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