BLASTX nr result
ID: Panax24_contig00014615
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00014615
(642 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012078159.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 117 7e-30
XP_003601110.1 30S ribosomal protein S13 [Medicago truncatula] A... 116 2e-29
XP_015571459.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 116 2e-29
XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 116 3e-29
XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus t... 116 3e-29
OMO56194.1 Ribosomal protein S13 [Corchorus olitorius] 115 4e-29
XP_013662406.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 5e-29
OMO57192.1 Ribosomal protein S13 [Corchorus capsularis] 115 7e-29
XP_019180048.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 115 7e-29
AFK44070.1 unknown [Lotus japonicus] 114 9e-29
ADR30788.1 chloroplast 30S ribosomal protein S13 [Hevea brasilie... 114 1e-28
XP_002302256.1 hypothetical protein POPTR_0002s08900g [Populus t... 114 1e-28
XP_013612722.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 1e-28
XP_013667649.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 1e-28
XP_018446555.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 2e-28
XP_018473709.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 2e-28
XP_009121676.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 2e-28
XP_013629852.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 2e-28
XP_009131397.1 PREDICTED: 30S ribosomal protein S13, chloroplast... 114 2e-28
CDY57901.1 BnaC09g54460D [Brassica napus] 114 2e-28
>XP_012078159.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Jatropha
curcas] KDP32750.1 hypothetical protein JCGZ_12042
[Jatropha curcas]
Length = 168
Score = 117 bits (294), Expect = 7e-30
Identities = 61/95 (64%), Positives = 68/95 (71%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL+ L+ NKITKDL EE+I LRDEV+KYMIEGDLRR A +I RLK IQCYRG
Sbjct: 74 RARQILADLSFENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGI 133
Query: 245 RHMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
RH+ GL CRGQRTK NC T+ KAPR
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAPR 168
>XP_003601110.1 30S ribosomal protein S13 [Medicago truncatula] AES71361.1 30S
ribosomal protein S13 [Medicago truncatula] AFK46233.1
unknown [Medicago truncatula]
Length = 166
Score = 116 bits (291), Expect = 2e-29
Identities = 55/80 (68%), Positives = 67/80 (83%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL+ +++ NK+TK+L EE+I+LRDEVNKYMIEGDLRR A +I+RLK IQCYRG
Sbjct: 74 RARQILTDISMENKVTKELSEEELISLRDEVNKYMIEGDLRRFNALNIKRLKEIQCYRGI 133
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153
>XP_015571459.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Ricinus
communis]
Length = 168
Score = 116 bits (291), Expect = 2e-29
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQILS L++ NKITK+L EE+I LRDEV+KYMIEGDLRR A +I RLK IQCYRG
Sbjct: 74 RARQILSDLSMENKITKELSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGV 133
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 134 RHIQGLPCRGQRTKNNCRTL 153
>XP_011001411.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Populus
euphratica]
Length = 168
Score = 116 bits (290), Expect = 3e-29
Identities = 60/94 (63%), Positives = 67/94 (71%)
Frame = -2
Query: 422 ARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGAR 243
ARQILS L + NKITKDL +E+I LRDEV+KYMIEGDLRR A +I RLK IQCYRG R
Sbjct: 75 ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 242 HMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
H+ GL CRGQRTK NC T+ KAPR
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>XP_002306609.2 hypothetical protein POPTR_0005s16160g [Populus trichocarpa]
EEE93605.2 hypothetical protein POPTR_0005s16160g
[Populus trichocarpa]
Length = 168
Score = 116 bits (290), Expect = 3e-29
Identities = 60/94 (63%), Positives = 67/94 (71%)
Frame = -2
Query: 422 ARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGAR 243
ARQILS L + NKITKDL +E+I LRDEV+KYMIEGDLRR A +I RLK IQCYRG R
Sbjct: 75 ARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVR 134
Query: 242 HMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
H+ GL CRGQRTK NC T+ KAPR
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>OMO56194.1 Ribosomal protein S13 [Corchorus olitorius]
Length = 168
Score = 115 bits (289), Expect = 4e-29
Identities = 60/95 (63%), Positives = 67/95 (70%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKDL EE+I +RDEV+KYMIEGDLRR A +I RLK IQCYRG
Sbjct: 74 RARQILCDLKMDNKITKDLSEEELITIRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGI 133
Query: 245 RHMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
RH+ GL CRGQRTK NC T+ KAPR
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 168
>XP_013662406.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Brassica
napus]
Length = 132
Score = 114 bits (285), Expect = 5e-29
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 38 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 97
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 98 RHIQGLPCRGQRTKNNCRTL 117
>OMO57192.1 Ribosomal protein S13 [Corchorus capsularis]
Length = 168
Score = 115 bits (287), Expect = 7e-29
Identities = 59/95 (62%), Positives = 67/95 (70%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKDL EE+I +RDEV+KYMIEGDL+R A +I RLK IQCYRG
Sbjct: 74 RARQILCDLKMDNKITKDLSEEELITIRDEVSKYMIEGDLKRFNALNIRRLKEIQCYRGV 133
Query: 245 RHMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
RH+ GL CRGQRTK NC T+ KAPR
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 168
>XP_019180048.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Ipomoea
nil]
Length = 168
Score = 115 bits (287), Expect = 7e-29
Identities = 60/95 (63%), Positives = 67/95 (70%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQILS + + NKITK+L EE+I LRDEV+KYMIEGDLRR A I RLK IQCYRG
Sbjct: 74 RARQILSDIGMDNKITKELSQEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGI 133
Query: 245 RHMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
RH+ GL CRGQRTK NC T+ KAPR
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR 168
>AFK44070.1 unknown [Lotus japonicus]
Length = 164
Score = 114 bits (286), Expect = 9e-29
Identities = 56/80 (70%), Positives = 65/80 (81%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RAR+IL LN+ NKITK+L EE+I LRDEV+KYMIEGDLRR A +I+RLK IQCYRG
Sbjct: 72 RARKILCDLNMDNKITKELSEEELITLRDEVSKYMIEGDLRRFNATNIKRLKDIQCYRGI 131
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 132 RHIQGLPCRGQRTKNNCRTL 151
>ADR30788.1 chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
Length = 168
Score = 114 bits (286), Expect = 1e-28
Identities = 60/95 (63%), Positives = 68/95 (71%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQILS L++ NKITKDL EE+I LRDEV+KYMIEGDLRR A +I LK IQC+RG
Sbjct: 74 RARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRGLKEIQCHRGI 133
Query: 245 RHMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
RH+ GL CRGQRTK NC T+ KAPR
Sbjct: 134 RHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAPR 168
>XP_002302256.1 hypothetical protein POPTR_0002s08900g [Populus trichocarpa]
ABK95935.1 unknown [Populus trichocarpa] EEE81529.1
hypothetical protein POPTR_0002s08900g [Populus
trichocarpa]
Length = 168
Score = 114 bits (286), Expect = 1e-28
Identities = 60/94 (63%), Positives = 67/94 (71%)
Frame = -2
Query: 422 ARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGAR 243
ARQILS L++ NKITKDL EE+I LRDEV+KY IEGDLRR A +I RLK IQCYRG R
Sbjct: 75 ARQILSDLSMENKITKDLSEEELIILRDEVSKYTIEGDLRRFNALNIRRLKEIQCYRGIR 134
Query: 242 HMDGLSCRGQRTKTNCWTMXXXXXXXXXXXKAPR 141
H+ GL CRGQRTK NC T+ KAPR
Sbjct: 135 HIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168
>XP_013612722.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica
oleracea var. oleracea]
Length = 166
Score = 114 bits (285), Expect = 1e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 72 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 131
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 132 RHIQGLPCRGQRTKNNCRTL 151
>XP_013667649.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Brassica
napus] XP_013714602.1 PREDICTED: 30S ribosomal protein
S13, chloroplastic-like [Brassica napus]
Length = 167
Score = 114 bits (285), Expect = 1e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 73 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 132
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 133 RHIQGLPCRGQRTKNNCRTL 152
>XP_018446555.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Raphanus
sativus]
Length = 169
Score = 114 bits (285), Expect = 2e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_018473709.1 PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Raphanus
sativus]
Length = 169
Score = 114 bits (285), Expect = 2e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_009121676.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa]
CDX69590.1 BnaA10g19390D [Brassica napus]
Length = 169
Score = 114 bits (285), Expect = 2e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_013629852.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica
oleracea var. oleracea] XP_013714552.1 PREDICTED: 30S
ribosomal protein S13, chloroplastic [Brassica napus]
CDX70555.1 BnaC03g06390D [Brassica napus]
Length = 169
Score = 114 bits (285), Expect = 2e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>XP_009131397.1 PREDICTED: 30S ribosomal protein S13, chloroplastic [Brassica rapa]
XP_013727081.1 PREDICTED: 30S ribosomal protein S13,
chloroplastic-like [Brassica napus] XP_013727788.1
PREDICTED: 30S ribosomal protein S13, chloroplastic-like
[Brassica napus] XP_013676674.1 PREDICTED: 30S ribosomal
protein S13, chloroplastic-like [Brassica napus]
XP_013676679.1 PREDICTED: 30S ribosomal protein S13,
chloroplastic-like [Brassica napus] CDX78570.1
BnaA03g04820D [Brassica napus]
Length = 169
Score = 114 bits (285), Expect = 2e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154
>CDY57901.1 BnaC09g54460D [Brassica napus]
Length = 169
Score = 114 bits (285), Expect = 2e-28
Identities = 56/80 (70%), Positives = 63/80 (78%)
Frame = -2
Query: 425 RARQILSKLNIVNKITKDLCNEEIIALRDEVNKYMIEGDLRRLVAHDIERLKAIQCYRGA 246
RARQIL L + NKITKD+ EE+I LRDEV+KYMIEGDLRR A I+RLK IQCYRG
Sbjct: 75 RARQILVDLQMENKITKDMAEEELIVLRDEVSKYMIEGDLRRFNALAIKRLKEIQCYRGV 134
Query: 245 RHMDGLSCRGQRTKTNCWTM 186
RH+ GL CRGQRTK NC T+
Sbjct: 135 RHIQGLPCRGQRTKNNCRTL 154