BLASTX nr result

ID: Panax24_contig00014559 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00014559
         (435 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017225248.1 PREDICTED: zinc finger BED domain-containing prot...    55   4e-06
JAU25591.1 Zinc finger BED domain-containing protein RICESLEEPER...    53   5e-06
XP_018459100.1 PREDICTED: zinc finger BED domain-containing prot...    54   9e-06

>XP_017225248.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
           2-like [Daucus carota subsp. sativus]
          Length = 811

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
 Frame = -1

Query: 339 VPNTQTENQPQLIGDSQPENATEVEVEAEHG----KKRKKKTSKAWDEFTVVTLKDGTKK 172
           + NT T + P  + ++  ENA E+++E E      KK+++KTS+ W +   +TL DGT K
Sbjct: 15  IHNTSTNDIPASVENN--ENADEMDIEEEENSMFQKKKRQKTSEVWKDLKEITLPDGTLK 72

Query: 171 VECKHCSSK 145
            EC HC +K
Sbjct: 73  AECIHCKTK 81


>JAU25591.1 Zinc finger BED domain-containing protein RICESLEEPER 4, partial
           [Noccaea caerulescens]
          Length = 148

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = -1

Query: 342 QVPNTQTENQPQLIGDSQPENATEVEVEAEHGKKRKKKTSKAWDEFTVVTLKDGTKKVEC 163
           + P++Q +N      D   E+ T+ E E    +++ ++ S  W++F  +  KDGT+K +C
Sbjct: 11  KTPSSQNKNNSN--NDEHDESETDDEEENGTEQRQSRRHSSVWEDFEPIIKKDGTQKAQC 68

Query: 162 KHCSSKYGFY 133
           KHC ++Y F+
Sbjct: 69  KHCKTEYKFH 78


>XP_018459100.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER
           2-like [Raphanus sativus]
          Length = 563

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 21/62 (33%), Positives = 38/62 (61%)
 Frame = -1

Query: 330 TQTENQPQLIGDSQPENATEVEVEAEHGKKRKKKTSKAWDEFTVVTLKDGTKKVECKHCS 151
           T+TE + Q   + Q E       +A   +++++KTS  W++F +V ++DGT+K +C HC 
Sbjct: 35  TETEAEIQTEAEVQTETQATASTQAAKPQRKRRKTSTVWEDFVLVRIEDGTEKAKCNHCG 94

Query: 150 SK 145
           S+
Sbjct: 95  SE 96


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