BLASTX nr result
ID: Panax24_contig00014366
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00014366
(1209 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017220385.1 PREDICTED: THO complex subunit 4B-like [Daucus ca... 146 8e-38
XP_018814549.1 PREDICTED: THO complex subunit 4A-like [Juglans r... 129 2e-32
XP_018831985.1 PREDICTED: THO complex subunit 4B-like [Juglans r... 128 3e-31
CAN83715.1 hypothetical protein VITISV_023787 [Vitis vinifera] 129 5e-31
XP_002284215.1 PREDICTED: THO complex subunit 4A [Vitis vinifera... 127 1e-30
GAV76081.1 RRM_1 domain-containing protein [Cephalotus follicula... 124 8e-30
XP_002531375.1 PREDICTED: THO complex subunit 4A [Ricinus commun... 122 6e-29
XP_010260105.1 PREDICTED: THO complex subunit 4A [Nelumbo nucifera] 122 1e-28
OAY37838.1 hypothetical protein MANES_11G133200 [Manihot esculenta] 121 2e-28
XP_010092777.1 RNA and export factor-binding protein 2 [Morus no... 121 2e-28
XP_011624054.1 PREDICTED: THO complex subunit 4A isoform X2 [Amb... 121 2e-28
XP_006846043.1 PREDICTED: THO complex subunit 4A isoform X1 [Amb... 121 2e-28
ONK62306.1 uncharacterized protein A4U43_C07F2540 [Asparagus off... 118 3e-28
XP_018836017.1 PREDICTED: THO complex subunit 4A-like [Juglans r... 120 3e-28
XP_002316299.1 hypothetical protein POPTR_0010s21510g [Populus t... 120 4e-28
XP_009387756.1 PREDICTED: THO complex subunit 4A [Musa acuminata... 120 5e-28
XP_009421344.1 PREDICTED: THO complex subunit 4A-like [Musa acum... 120 5e-28
KJB08860.1 hypothetical protein B456_001G108500 [Gossypium raimo... 118 5e-28
JAT42257.1 RNA and export factor-binding protein 2, partial [Ant... 121 6e-28
XP_008223173.1 PREDICTED: THO complex subunit 4A [Prunus mume] 119 9e-28
>XP_017220385.1 PREDICTED: THO complex subunit 4B-like [Daucus carota subsp.
sativus] KZM84918.1 hypothetical protein DCAR_027660
[Daucus carota subsp. sativus]
Length = 258
Score = 146 bits (369), Expect = 8e-38
Identities = 72/89 (80%), Positives = 79/89 (88%)
Frame = -2
Query: 269 QVLFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVG 90
+VLFSEVG L+RYSIHYDKSGRSKGTAEV FA +SDAFAAVKRYN VQLDGKPMKIEMVG
Sbjct: 118 KVLFSEVGELRRYSIHYDKSGRSKGTAEVAFAHQSDAFAAVKRYNGVQLDGKPMKIEMVG 177
Query: 89 LKLVTPAAITIPPTSSGILGNQGGAFRRQ 3
+KLV PA I +PPT++G GN GGAFRRQ
Sbjct: 178 VKLVAPANIAMPPTTNGFPGNTGGAFRRQ 206
>XP_018814549.1 PREDICTED: THO complex subunit 4A-like [Juglans regia]
Length = 150
Score = 129 bits (323), Expect = 2e-32
Identities = 67/89 (75%), Positives = 75/89 (84%)
Frame = -2
Query: 275 SFQVLFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEM 96
S QVLFSEVG LKRYSIHYD+SGRSKGTAEVVF +SDA AA+KRYNNVQLDGKPMKIE+
Sbjct: 6 SLQVLFSEVGDLKRYSIHYDRSGRSKGTAEVVFLHQSDAVAALKRYNNVQLDGKPMKIEL 65
Query: 95 VGLKLVTPAAITIPPTSSGILGNQGGAFR 9
VG+ LVTPA +P ++S ILG GAFR
Sbjct: 66 VGVNLVTPA--FVPSSTSSILGKPIGAFR 92
>XP_018831985.1 PREDICTED: THO complex subunit 4B-like [Juglans regia]
Length = 239
Score = 128 bits (322), Expect = 3e-31
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = -2
Query: 269 QVLFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVG 90
QVLFSEVG LKRY IHYD+SGRSKGTAEVVF R+ DA AA+KRYNNV+LDGKPMKIE+VG
Sbjct: 98 QVLFSEVGDLKRYFIHYDRSGRSKGTAEVVFLRQLDAVAAIKRYNNVELDGKPMKIELVG 157
Query: 89 LKLVTPAAITIPPTSSGILGNQGGAFR 9
+ LVTPA +PP++S ILGN G FR
Sbjct: 158 VSLVTPA--IVPPSTSSILGNPIGTFR 182
>CAN83715.1 hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 129 bits (324), Expect = 5e-31
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSIHYD+SGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 106 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTN 165
Query: 83 LVTPAAITIPPTSSGILGNQGGAFRR 6
+ TPAA +PP ++G GN G RR
Sbjct: 166 IATPAA--VPPVTNGTFGNSNGGLRR 189
>XP_002284215.1 PREDICTED: THO complex subunit 4A [Vitis vinifera] CBI16171.3
unnamed protein product, partial [Vitis vinifera]
Length = 243
Score = 127 bits (319), Expect = 1e-30
Identities = 63/85 (74%), Positives = 70/85 (82%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSIHYD+SGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 106 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTN 165
Query: 83 LVTPAAITIPPTSSGILGNQGGAFR 9
+ TPAA +PP ++G GN G R
Sbjct: 166 IATPAA--VPPVTNGTFGNSNGGLR 188
>GAV76081.1 RRM_1 domain-containing protein [Cephalotus follicularis]
Length = 237
Score = 124 bits (312), Expect = 8e-30
Identities = 61/87 (70%), Positives = 74/87 (85%)
Frame = -2
Query: 269 QVLFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVG 90
++LF+EVG LKRYSIHYD+SGRSKGTAEVVF R++DA +A+KRY+NVQLDGKPMKIE+VG
Sbjct: 97 KLLFTEVGELKRYSIHYDRSGRSKGTAEVVFIRQADALSAIKRYHNVQLDGKPMKIELVG 156
Query: 89 LKLVTPAAITIPPTSSGILGNQGGAFR 9
+ LVTP + +P TS ILG GAFR
Sbjct: 157 VNLVTP--VPVPTTSYSILGKPNGAFR 181
>XP_002531375.1 PREDICTED: THO complex subunit 4A [Ricinus communis] EEF31023.1 RNA
and export factor binding protein, putative [Ricinus
communis]
Length = 247
Score = 122 bits (307), Expect = 6e-29
Identities = 63/85 (74%), Positives = 70/85 (82%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSIHYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 110 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTN 169
Query: 83 LVTPAAITIPPTSSGILGNQGGAFR 9
+ TPAA P ++G GN GA R
Sbjct: 170 IATPAA---TPAANGNFGNSNGAPR 191
>XP_010260105.1 PREDICTED: THO complex subunit 4A [Nelumbo nucifera]
Length = 244
Score = 122 bits (305), Expect = 1e-28
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRY++HYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 108 LFSEVGDLKRYTVHYDRSGRSKGTAEVVFSRRADALAAVKRYNNVQLDGKPMKIEVVGTN 167
Query: 83 LVTPAAITIPPTSSGILGNQGGAFR 9
+ TP A +PP ++G GN G R
Sbjct: 168 IATPVA--VPPAANGGFGNPNGVPR 190
>OAY37838.1 hypothetical protein MANES_11G133200 [Manihot esculenta]
Length = 239
Score = 121 bits (303), Expect = 2e-28
Identities = 62/85 (72%), Positives = 69/85 (81%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSIHYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 104 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTN 163
Query: 83 LVTPAAITIPPTSSGILGNQGGAFR 9
+ TPAA PP ++ GN G R
Sbjct: 164 IATPAA---PPANNVSFGNSNGVPR 185
>XP_010092777.1 RNA and export factor-binding protein 2 [Morus notabilis]
EXB52242.1 RNA and export factor-binding protein 2
[Morus notabilis]
Length = 248
Score = 121 bits (303), Expect = 2e-28
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRY+IHYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 107 LFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTN 166
Query: 83 LVTPAAITIPPTSSGILGNQGG 18
+ TPAA PP ++G GN G
Sbjct: 167 VATPAA--PPPPANGSFGNSNG 186
>XP_011624054.1 PREDICTED: THO complex subunit 4A isoform X2 [Amborella trichopoda]
Length = 250
Score = 121 bits (303), Expect = 2e-28
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSIHYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 110 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTN 169
Query: 83 LVTPAAITIPPTSSGILGNQGG 18
LVTPA IP ++G+L G
Sbjct: 170 LVTPA--PIPQVANGLLATPNG 189
>XP_006846043.1 PREDICTED: THO complex subunit 4A isoform X1 [Amborella trichopoda]
XP_011624053.1 PREDICTED: THO complex subunit 4A isoform
X1 [Amborella trichopoda] ERN07718.1 hypothetical
protein AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 121 bits (303), Expect = 2e-28
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSIHYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 113 LFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTN 172
Query: 83 LVTPAAITIPPTSSGILGNQGG 18
LVTPA IP ++G+L G
Sbjct: 173 LVTPA--PIPQVANGLLATPNG 192
>ONK62306.1 uncharacterized protein A4U43_C07F2540 [Asparagus officinalis]
Length = 175
Score = 118 bits (296), Expect = 3e-28
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LF+EVG LKRY+IHYD+SGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 46 LFAEVGDLKRYTIHYDRSGRSKGTAEVVFSRRLDAAAAVKRYNNVQLDGKPMKIEIVGTN 105
Query: 83 LVTPAAITIPPTSSGILGNQGGAFR 9
+VTP A +P S+ GN GA R
Sbjct: 106 IVTPPAPQVPQVSNLGFGNSIGAPR 130
>XP_018836017.1 PREDICTED: THO complex subunit 4A-like [Juglans regia]
Length = 240
Score = 120 bits (301), Expect = 3e-28
Identities = 60/79 (75%), Positives = 67/79 (84%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LF+EVG LKRYSIHYD+SGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 102 LFAEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTN 161
Query: 83 LVTPAAITIPPTSSGILGN 27
+ TPAA PP ++G GN
Sbjct: 162 IATPAA---PPATNGTFGN 177
>XP_002316299.1 hypothetical protein POPTR_0010s21510g [Populus trichocarpa]
EEF02470.1 hypothetical protein POPTR_0010s21510g
[Populus trichocarpa]
Length = 250
Score = 120 bits (301), Expect = 4e-28
Identities = 56/87 (64%), Positives = 72/87 (82%)
Frame = -2
Query: 269 QVLFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVG 90
+VLFSEVG L RYS+HYD SGRSKGTAEVVF+R++DA AA++RYNNVQLDGKP+KIE+VG
Sbjct: 102 KVLFSEVGELLRYSLHYDMSGRSKGTAEVVFSRQTDALAAIRRYNNVQLDGKPLKIELVG 161
Query: 89 LKLVTPAAITIPPTSSGILGNQGGAFR 9
+ ++TP +T+P T+ + N GA R
Sbjct: 162 VNVITPVPVTVPVTAITNVANPNGAVR 188
>XP_009387756.1 PREDICTED: THO complex subunit 4A [Musa acuminata subsp.
malaccensis]
Length = 239
Score = 120 bits (300), Expect = 5e-28
Identities = 59/86 (68%), Positives = 73/86 (84%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYS++YD+SGRSKGTAEVVF+RR+DA AAVKRYNNV LDGKPM+IE++G+
Sbjct: 104 LFSEVGDLKRYSVNYDRSGRSKGTAEVVFSRRADALAAVKRYNNVLLDGKPMQIEIIGIN 163
Query: 83 LVTPAAITIPPTSSGILGNQGGAFRR 6
+ TPAA +P S+G+ GN GA +R
Sbjct: 164 IPTPAA--VPQFSNGVFGNPNGAPKR 187
>XP_009421344.1 PREDICTED: THO complex subunit 4A-like [Musa acuminata subsp.
malaccensis]
Length = 239
Score = 120 bits (300), Expect = 5e-28
Identities = 61/83 (73%), Positives = 69/83 (83%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRYSI+YD+SGRSKGTAEVVFARR+DA AAVKRYNNV LDGKPMKIE++G
Sbjct: 104 LFSEVGDLKRYSINYDRSGRSKGTAEVVFARRADALAAVKRYNNVLLDGKPMKIEIIGTN 163
Query: 83 LVTPAAITIPPTSSGILGNQGGA 15
+ TPAA +P S+G GN GA
Sbjct: 164 ISTPAA--VPQLSNGAFGNSNGA 184
>KJB08860.1 hypothetical protein B456_001G108500 [Gossypium raimondii]
Length = 190
Score = 118 bits (296), Expect = 5e-28
Identities = 60/85 (70%), Positives = 68/85 (80%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRY IHYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 105 LFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEIVGTN 164
Query: 83 LVTPAAITIPPTSSGILGNQGGAFR 9
+ TP T P ++G G+ GA R
Sbjct: 165 IATP---TAPSAANGTFGSSNGAPR 186
>JAT42257.1 RNA and export factor-binding protein 2, partial [Anthurium
amnicola]
Length = 312
Score = 121 bits (304), Expect = 6e-28
Identities = 61/82 (74%), Positives = 70/82 (85%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKR S+HYD+SGRSKGTAEVVF+RR+DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 176 LFSEVGDLKRCSVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTN 235
Query: 83 LVTPAAITIPPTSSGILGNQGG 18
+VTPAA +P ++GI GN G
Sbjct: 236 IVTPAA-PVPQITNGIFGNPNG 256
>XP_008223173.1 PREDICTED: THO complex subunit 4A [Prunus mume]
Length = 252
Score = 119 bits (299), Expect = 9e-28
Identities = 60/86 (69%), Positives = 68/86 (79%), Gaps = 1/86 (1%)
Frame = -2
Query: 263 LFSEVGVLKRYSIHYDKSGRSKGTAEVVFARRSDAFAAVKRYNNVQLDGKPMKIEMVGLK 84
LFSEVG LKRY +HYD+SGRSKGTAEVVF+RR DA AAVKRYNNVQLDGKPMKIE+VG
Sbjct: 106 LFSEVGDLKRYGVHYDRSGRSKGTAEVVFSRRPDAVAAVKRYNNVQLDGKPMKIEIVGTN 165
Query: 83 LVTPAA-ITIPPTSSGILGNQGGAFR 9
+ TP T+PP ++G GN G R
Sbjct: 166 ISTPGGPPTLPPAANGNFGNSNGVPR 191