BLASTX nr result
ID: Panax24_contig00013974
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00013974
(2561 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN66710.1 hypothetical protein VITISV_006397 [Vitis vinifera] 657 0.0
CAN66873.1 hypothetical protein VITISV_021427 [Vitis vinifera] 638 0.0
CAN77568.1 hypothetical protein VITISV_010611 [Vitis vinifera] 635 0.0
CAN69855.1 hypothetical protein VITISV_041230 [Vitis vinifera] 598 0.0
CAN66959.1 hypothetical protein VITISV_013138 [Vitis vinifera] 570 0.0
CAN62884.1 hypothetical protein VITISV_039744 [Vitis vinifera] 648 0.0
CAX68207.1 Copia-like retrotransposon [Helianthus annuus] 549 0.0
CAN76080.1 hypothetical protein VITISV_008975, partial [Vitis vi... 557 0.0
KYP64289.1 Retrovirus-related Pol polyprotein from transposon TN... 464 e-163
KYP54652.1 Retrovirus-related Pol polyprotein from transposon TN... 462 e-161
KYP64290.1 Retrovirus-related Pol polyprotein from transposon TN... 436 e-155
AAR01682.1 putative gag and pol protein [Oryza sativa Japonica G... 441 e-154
AAT44162.1 putative polyprotein [Oryza sativa Japonica Group] 440 e-154
AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japoni... 439 e-153
ABF96702.1 retrotransposon protein, putative, Ty1-copia subclass... 439 e-153
AAU44026.2 putative polyprotein [Oryza sativa Japonica Group] 439 e-153
CAD40744.2 OSJNBa0072D21.4 [Oryza sativa Japonica Group] 439 e-153
ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass... 441 e-153
AAP20858.1 retrotransposon protein, putative, Ty1-copia sub-clas... 439 e-153
ABA91402.1 retrotransposon protein, putative, Ty1-copia subclass... 439 e-153
>CAN66710.1 hypothetical protein VITISV_006397 [Vitis vinifera]
Length = 1105
Score = 657 bits (1696), Expect(3) = 0.0
Identities = 319/428 (74%), Positives = 376/428 (87%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VAR TS+RI+FALASI+NL+VHQ+DVKT FLNGDL++EVYMEQPEGFVLP NE+KV
Sbjct: 677 TYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLPGNENKV 736
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKLVKSLY LKQAPKQWHEKFD ILS GF+HN ADKC+Y +TC++Y++++ LYVDDMLI
Sbjct: 737 CKLVKSLYGLKQAPKQWHEKFDHAILSBGFRHNNADKCLYSKTCBDYMIIVCLYVDDMLI 796
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S+ M G+ ETKRFLSSTFKMKDLG+VDTI GIKVKRNSGGY L+Q+HYIEKV+ KFSHL
Sbjct: 797 LSDDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHL 856
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K K+ + PFD +IKL KNDGR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKLSRFTSNP
Sbjct: 857 KIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFTSNP 916
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
S EH KAIGRVL YL+ T++L +QYSKFP I+EGY+D SWI S+G+N TTGWVFTLGGG
Sbjct: 917 SVEHWKAIGRVLSYLRNTKELSLQYSKFPAIIEGYSDASWISSVGDNLSTTGWVFTLGGG 976
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW KKQTCI+HSTME+EFIALA TRKEAEWLRD +++I T+ N+S V I CDSQAT
Sbjct: 977 AVSWGSKKQTCISHSTMEAEFIALAATRKEAEWLRDLMMDIPFTANNVSTVSIHCDSQAT 1036
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
LARAYS YNGKSRHIS+RH+YVR+LI++GIIS+++VRS GNLADPFTKP +RD+V TS
Sbjct: 1037 LARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLVRITS 1096
Query: 668 NLMGLKLL 645
MGLKLL
Sbjct: 1097 RGMGLKLL 1104
Score = 161 bits (408), Expect(3) = 0.0
Identities = 83/143 (58%), Positives = 105/143 (73%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHSGEALGE 2381
L PR IKCAFVGYAS+SKAYRLL+LE N IIES++VEFFE+LL+ N GE+L E
Sbjct: 475 LXPRAIKCAFVGYASNSKAYRLLDLEXNXIIESREVEFFENLLSDSNSQVPTSVGESLEE 534
Query: 2380 PSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMIP 2201
+++EQP RKS+R RK K LG +E+DSQRISFYLV+GNR++++R IP
Sbjct: 535 TPSKVIEQPIVP---------RKSQRARKEKVLGSDEIDSQRISFYLVEGNREDIIRKIP 585
Query: 2200 IVLQVEDDPKMFKDVMASRDAVF 2132
IVLQ+E+DPK +K+ MASRD F
Sbjct: 586 IVLQIEEDPKTYKEAMASRDVAF 608
Score = 125 bits (315), Expect(3) = 0.0
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AI DEMDSI+SN TWELVDLP SK IGCKWVFRRKYHTD + T+KARLVAKGF+
Sbjct: 608 FWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFK 667
Query: 1953 QKQGIDYFDT 1924
Q++GIDYFDT
Sbjct: 668 QREGIDYFDT 677
>CAN66873.1 hypothetical protein VITISV_021427 [Vitis vinifera]
Length = 1473
Score = 638 bits (1645), Expect(3) = 0.0
Identities = 310/422 (73%), Positives = 365/422 (86%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VAR TS+RI+FALASI+NL+VHQ+DVKT FLNGDL++EVYMEQPEGFVL NE+KV
Sbjct: 884 TYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLLGNENKV 943
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKLVKSLY LKQAPKQWHEKFD ILS GF+HN DKC+Y +TCD+Y+V++ LYVDDMLI
Sbjct: 944 CKLVKSLYGLKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLI 1003
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S+ M G+ ETKRFLS TFKMKDL +VDTI GIKVKRNSGGY L+Q+HYIEKV+ KFSHL
Sbjct: 1004 LSDDMXGIIETKRFLSXTFKMKDLXEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHL 1063
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K K+ + PFD +IKL KN+GR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKLSRFTSNP
Sbjct: 1064 KIKDANTPFDSSIKLEKNBGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFTSNP 1123
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
S EH KAIGRVLGYLK T++L +QYSKFP I+EGY+D SWI S+G+N TTGWVFTLGGG
Sbjct: 1124 SVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSVGDNLSTTGWVFTLGGG 1183
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW KKQTCI+HSTME+EFIALA T KEAEWLRD +++I T+ N+S V I CDSQAT
Sbjct: 1184 AVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCDSQAT 1243
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
LARAYS YNGKSRHIS+RH+YVR+LI++GIIS+++VRS GNLADPFTKP +RD+
Sbjct: 1244 LARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLNFTYV 1303
Query: 668 NL 663
NL
Sbjct: 1304 NL 1305
Score = 160 bits (406), Expect(3) = 0.0
Identities = 84/143 (58%), Positives = 105/143 (73%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHSGEALGE 2381
LGPR IKCAFVG AS+S AYRLL+LESNVIIES++VEFFE+LL+ N GE+ E
Sbjct: 682 LGPRAIKCAFVGCASNSNAYRLLDLESNVIIESREVEFFENLLSDSNSQVPTSVGESQEE 741
Query: 2380 PSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMIP 2201
++VEQP RKS+R RK K LG +E+DSQRISFYLV+GNR++++R IP
Sbjct: 742 TPSKVVEQPIVP---------RKSQRARKEKVLGSDEIDSQRISFYLVEGNREDIIRKIP 792
Query: 2200 IVLQVEDDPKMFKDVMASRDAVF 2132
IVLQ+E+DPK +K+ MASRD F
Sbjct: 793 IVLQIEEDPKTYKEAMASRDVAF 815
Score = 125 bits (315), Expect(3) = 0.0
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AI DEMDSI+SN TWELVDLP SK IGCKWVFRRKYHTD + T+KARLVAKGF+
Sbjct: 815 FWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFK 874
Query: 1953 QKQGIDYFDT 1924
Q++GIDYFDT
Sbjct: 875 QREGIDYFDT 884
>CAN77568.1 hypothetical protein VITISV_010611 [Vitis vinifera]
Length = 1067
Score = 635 bits (1638), Expect(3) = 0.0
Identities = 311/428 (72%), Positives = 367/428 (85%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VAR TS+RI+F LASI+NL+VHQIDVKT FLN DL++EVYMEQPEGFVL NE+KV
Sbjct: 639 TYAPVARTTSIRILFXLASIHNLFVHQIDVKTXFLNXDLNEEVYMEQPEGFVLLGNENKV 698
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKLVKSLY LKQAPKQ HEKFD ILS GF+HN DKC+Y +TCD+Y+V++ LYVDDMLI
Sbjct: 699 CKLVKSLYGLKQAPKQXHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLI 758
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S+ M G+ ETKRFLSSTFKMKDLG+VDTI GIKVKRNSGGY L+Q+HYIEKV+ KFSHL
Sbjct: 759 LSDDMKGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHL 818
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K K+ + PFD +IKL KNDGR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKLSRF SNP
Sbjct: 819 KIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFISNP 878
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
S EH KAIGRVLGYLK T++L +QYSKFP I+EGY+D SWI S+ +N TTGWVFTLGGG
Sbjct: 879 SVEHWKAIGRVLGYLKNTKELSLQYSKFPXIJEGYSDASWISSVXDNLSTTGWVFTLGGG 938
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
+SW KKQTCI+HSTME+EFIALA T KE EWL+D +++I T+ N+S V I CDSQAT
Sbjct: 939 VVSWGSKKQTCISHSTMEAEFIALAATGKEVEWLKDLMMDIPFTANNVSTVSIHCDSQAT 998
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
LARAYS YNGKSRHIS+RH+YVR+LI++G+IS+++VRS GNLADPFTKP +RD++ TS
Sbjct: 999 LARAYSGVYNGKSRHISIRHEYVRQLIQNGVISISFVRSSGNLADPFTKPLARDLLRITS 1058
Query: 668 NLMGLKLL 645
MGLKLL
Sbjct: 1059 RGMGLKLL 1066
Score = 161 bits (407), Expect(3) = 0.0
Identities = 84/143 (58%), Positives = 105/143 (73%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHSGEALGE 2381
LGPR IKCAFVGYAS+SKAYRLL+LESNVIIES++VEFFE+LL+ N E+L E
Sbjct: 437 LGPRAIKCAFVGYASNSKAYRLLDLESNVIIESREVEFFENLLSDSNSQVPTSVXESLEE 496
Query: 2380 PSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMIP 2201
++VEQP RKS+R RK K LG +E+DSQ ISFYLV+GNR++++R IP
Sbjct: 497 TPSKVVEQPI---------VPRKSQRARKEKVLGXDEIDSQXISFYLVEGNREDIIRKIP 547
Query: 2200 IVLQVEDDPKMFKDVMASRDAVF 2132
IVLQ+E+DPK +K+ M SRD F
Sbjct: 548 IVLQIEEDPKTYKEXMXSRDVAF 570
Score = 116 bits (291), Expect(3) = 0.0
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AI DEMDSI+SN TWEL DLP SK I CKWVFR KYH D + T+KARLVAKGF+
Sbjct: 570 FWKEAINDEMDSIMSNQTWELXDLPPGSKPIXCKWVFRXKYHXDGMIQTFKARLVAKGFK 629
Query: 1953 QKQGIDYFDT 1924
Q++GIDYFDT
Sbjct: 630 QREGIDYFDT 639
>CAN69855.1 hypothetical protein VITISV_041230 [Vitis vinifera]
Length = 1236
Score = 598 bits (1541), Expect(3) = 0.0
Identities = 300/428 (70%), Positives = 354/428 (82%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VAR T +RI+FALASI+NL+VHQ+DVKT FLNG+L++EVYMEQPEGFVL NE+KV
Sbjct: 821 TYAPVARTTXIRILFALASIHNLFVHQMDVKTAFLNGBLNEEVYMEQPEGFVLLGNENKV 880
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKLVKSLY LKQ PKQWHEK D ILS GF+HN DKC+Y +TCD+Y+V++ LYVDDMLI
Sbjct: 881 CKLVKSLYGLKQDPKQWHEKXDHXILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLI 940
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S+ M G+ ETKRFLSSTFKMKDLG+VDTI GIKVKRNS GY L+Q+HYIEKV+ KFSHL
Sbjct: 941 LSDDMKGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSEGYALNQTHYIEKVVSKFSHL 1000
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K K+ + PFD +IKL KNDGR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKLSRF SN
Sbjct: 1001 KIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFISNL 1060
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
EH KAIGRVLGYLK T++L +QYSKFP I+EGY+D WI S+G+N TTG
Sbjct: 1061 RVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDARWISSVGDNLSTTG-------- 1112
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
KKQTCI+HSTME+EFIALA T KEAEWLRD +++I T+ N+S V I CDSQAT
Sbjct: 1113 -----SKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCDSQAT 1167
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
LARAYS YNGKSRHIS+RH+YVR+LI++GIIS+++VRS GNLADPFTKP +RD+V TS
Sbjct: 1168 LARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLVRITS 1227
Query: 668 NLMGLKLL 645
MGLKLL
Sbjct: 1228 RGMGLKLL 1235
Score = 168 bits (425), Expect(3) = 0.0
Identities = 90/144 (62%), Positives = 111/144 (77%), Gaps = 1/144 (0%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHS-GEALG 2384
LGPR IKCAFVGYAS+SKAYRLL+LESNVIIES++VEFFE+ L+ N FQ P S GE+L
Sbjct: 619 LGPRAIKCAFVGYASNSKAYRLLDLESNVIIESREVEFFENWLSDSN-FQVPTSVGESLE 677
Query: 2383 EPSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMI 2204
E ++VEQP RKS+R RK K LG +E+DSQRISFYLV+GNR++++R I
Sbjct: 678 ETPSKVVEQPIVP---------RKSQRARKEKVLGSDEIDSQRISFYLVEGNREDIIRKI 728
Query: 2203 PIVLQVEDDPKMFKDVMASRDAVF 2132
PIVLQ+E+DPK +K+ MASRD F
Sbjct: 729 PIVLQIEEDPKTYKEAMASRDVAF 752
Score = 125 bits (315), Expect(3) = 0.0
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AI DEMDSI+SN TWELVDLP SK IGCKWVFRRKYHTD + T+KARLVAKGF+
Sbjct: 752 FWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFK 811
Query: 1953 QKQGIDYFDT 1924
Q++GIDYFDT
Sbjct: 812 QREGIDYFDT 821
>CAN66959.1 hypothetical protein VITISV_013138 [Vitis vinifera]
Length = 1234
Score = 570 bits (1469), Expect(3) = 0.0
Identities = 288/428 (67%), Positives = 338/428 (78%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VAR TS+RI+FALASI+NL+VHQ+DVKT FLNGDL++EVYMEQPEGFVL NE+KV
Sbjct: 846 TYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLXGNENKV 905
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKLVKSLY LKQAPKQWHEKFD ILS GF+HN DKC+Y +TCD+Y+V++ LYVDDMLI
Sbjct: 906 CKLVKSLYGLKQAPKQWHEKFDHAILSBGFRHNNXDKCLYSKTCDDYMVIVCLYVDDMLI 965
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S+ M G+ ETKRFLSSTFKMKDLG+VDTI GIKVKRNSGGY L+Q+HYIEKV+ KFSHL
Sbjct: 966 LSDDMXGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHL 1025
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K K+ + PFD +IKL KNDGR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKL
Sbjct: 1026 KIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLR------ 1079
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
Y+D SWI S+G+N TTGWVFTLGGG
Sbjct: 1080 ----------------------------------YSDASWISSVGDNLSTTGWVFTLGGG 1105
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW KKQTCI+HSTME+EFIALA T KEAEWLRD +++I T+ N+S V I CDSQAT
Sbjct: 1106 AVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCDSQAT 1165
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
LARAYS YNGKSRHIS+RH+YVR+LI++GIIS+++VRS GNLADPFTKP +RD+V TS
Sbjct: 1166 LARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLVRITS 1225
Query: 668 NLMGLKLL 645
MGLKLL
Sbjct: 1226 RGMGLKLL 1233
Score = 168 bits (426), Expect(3) = 0.0
Identities = 87/143 (60%), Positives = 108/143 (75%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHSGEALGE 2381
LGPR IKCAFVGYAS+SKAYRLL+LESNVIIES++VEFFE+LL+ N GE+L E
Sbjct: 660 LGPRAIKCAFVGYASNSKAYRLLDLESNVIIESREVEFFENLLSDSNSQVPXSVGESLEE 719
Query: 2380 PSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMIP 2201
++VEQP RKS+R RK K LG +E+DSQRISFYLV+GNR++++R IP
Sbjct: 720 TPSKVVEQPI---------VPRKSQRARKEKVLGSDEIDSQRISFYLVEGNREDIIRKIP 770
Query: 2200 IVLQVEDDPKMFKDVMASRDAVF 2132
IVLQ+E+DPK +K+ MASRD F
Sbjct: 771 IVLQIEEDPKTYKEAMASRDVAF 793
Score = 90.5 bits (223), Expect(3) = 0.0
Identities = 44/70 (62%), Positives = 49/70 (70%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AI DEMDSI+SN TWELVDLP SK IGCKW ARLVAKGF+
Sbjct: 793 FWKEAINDEMDSIMSNQTWELVDLPPGSKPIGCKW----------------ARLVAKGFK 836
Query: 1953 QKQGIDYFDT 1924
Q++GIDYFDT
Sbjct: 837 QREGIDYFDT 846
>CAN62884.1 hypothetical protein VITISV_039744 [Vitis vinifera]
Length = 1136
Score = 648 bits (1672), Expect = 0.0
Identities = 320/432 (74%), Positives = 374/432 (86%), Gaps = 4/432 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDD----EVYMEQPEGFVLPEN 1761
T+A VAR TS+RI+FALASI+NL+VHQ+DVKT FLNGDL++ EVYMEQPEGFVL N
Sbjct: 704 TYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEDLNEEVYMEQPEGFVLLGN 763
Query: 1760 EHKVCKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVD 1581
E+KVCKLVKSLY LKQAPKQWHEKFD ILS GF+HN DKC+Y +TCD+Y+V++ LYVD
Sbjct: 764 ENKVCKLVKSLYGLKQAPKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVD 823
Query: 1580 DMLIVSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKK 1401
DMLI+S+ M G+ ETKRFLSSTFKMKDLG+VDTI GIKVKRNSGGY L+Q+HYIEKV+ K
Sbjct: 824 DMLILSDDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSK 883
Query: 1400 FSHLKFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRF 1221
FSHLK K+ + PFD +IKL KNDGR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKLSRF
Sbjct: 884 FSHLKIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRF 943
Query: 1220 TSNPSSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFT 1041
TSNPS EH KAIGRVLGYLK T++L +QYSKFP I+EGY+D SWI S+G+N TTGWVFT
Sbjct: 944 TSNPSVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSVGDNLSTTGWVFT 1003
Query: 1040 LGGGAISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCD 861
LGGGA+SW KKQTCI+HSTME+EFIALA T KEAEWLRD +++I T+ N+S V I CD
Sbjct: 1004 LGGGAVSWGSKKQTCISHSTMEAEFIALAATGKEAEWLRDLMMDIPFTANNVSTVSIHCD 1063
Query: 860 SQATLARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMV 681
SQATLARAYS YNGKSRHIS+RH+YVR+LI++GIIS+++VRS GNLADPFTKP +RD+V
Sbjct: 1064 SQATLARAYSGVYNGKSRHISIRHEYVRQLIQNGIISISFVRSSGNLADPFTKPLTRDLV 1123
Query: 680 IKTSNLMGLKLL 645
TS MGLKLL
Sbjct: 1124 RITSRGMGLKLL 1135
Score = 139 bits (349), Expect = 7e-30
Identities = 75/131 (57%), Positives = 93/131 (70%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHSGEALGE 2381
LGPR IKCAFVGYAS+SKAYRLL+LESNVIIES++VEFFE+LL+ N GE+ E
Sbjct: 527 LGPRAIKCAFVGYASNSKAYRLLDLESNVIIESREVEFFENLLSDSNSQVPTSVGESXEE 586
Query: 2380 PSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMIP 2201
++VEQP RKS+R RK K LG +E+DSQRISFYLV+GNR++++R IP
Sbjct: 587 TPSKVVEQPI---------VPRKSQRARKEKVLGSDEIDSQRISFYLVEGNREDIIRKIP 637
Query: 2200 IVLQVEDDPKM 2168
I + E D M
Sbjct: 638 IAINDEMDSIM 648
Score = 116 bits (291), Expect = 6e-23
Identities = 52/66 (78%), Positives = 58/66 (87%)
Frame = -3
Query: 2121 AIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFRQKQG 1942
AI DEMDSI+SN TWELVDLP SK IGCKWVFRRKYHTD + T+KARLVAKGF+Q++G
Sbjct: 639 AINDEMDSIMSNQTWELVDLPPGSKPIGCKWVFRRKYHTDGMIQTFKARLVAKGFKQREG 698
Query: 1941 IDYFDT 1924
IDYFDT
Sbjct: 699 IDYFDT 704
>CAX68207.1 Copia-like retrotransposon [Helianthus annuus]
Length = 1358
Score = 549 bits (1415), Expect(3) = 0.0
Identities = 260/426 (61%), Positives = 334/426 (78%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VARI S+R + A++++ LY+HQ+DVKT FLNG L++E+Y+EQPEGFV+P E+KV
Sbjct: 931 TYAPVARIGSIRTLIAVSALKGLYIHQMDVKTAFLNGYLNEEIYLEQPEGFVMPGQENKV 990
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
C+L+KSLY LKQAPKQWHE+FD T+ ++GF+HN AD+C+Y + Y V+I LYVDDMLI
Sbjct: 991 CRLIKSLYGLKQAPKQWHERFDTTVTAFGFRHNSADRCIYTKCEPGYTVVICLYVDDMLI 1050
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S H++G++ETK++LS FKMKDLG+VDTI GIKVKR LSQSHYIEK+L KF HL
Sbjct: 1051 ISTHLEGISETKKYLSLNFKMKDLGEVDTILGIKVKRAGSQISLSQSHYIEKILTKFQHL 1110
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
KE + PFDP++KL N GRAVAQLE+ASAIGS+MYAT CTR DIAFAVSKLS++T NP
Sbjct: 1111 NIKEFNTPFDPSVKLNVNSGRAVAQLEYASAIGSMMYATHCTRPDIAFAVSKLSQYTVNP 1170
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+EH KA+GRVLGYLKRT +L + Y+ ILEGY+D SWI ++K T+GW+FTL GG
Sbjct: 1171 GTEHWKAVGRVLGYLKRTSNLELTYTSSSRILEGYSDASWIDRTNDSKSTSGWIFTLAGG 1230
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW KKQTCI HSTME+E IALA KEAEW+RD L +I L + + + CDS+AT
Sbjct: 1231 AVSWASKKQTCIAHSTMEAELIALAAAGKEAEWIRDLLTDIRLWDVPMPCIPMYCDSEAT 1290
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
L++ Y+ YNG SRHI LRH+YVR+L++ G I + YV++ NLADPFTKP +RD+V+ T+
Sbjct: 1291 LSKVYNAVYNGGSRHIGLRHNYVRQLLESGTIKVVYVKTSKNLADPFTKPLTRDLVVNTA 1350
Query: 668 NLMGLK 651
MGLK
Sbjct: 1351 RDMGLK 1356
Score = 110 bits (274), Expect(3) = 0.0
Identities = 45/69 (65%), Positives = 56/69 (81%)
Frame = -3
Query: 2130 WKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFRQ 1951
WK+A+ DEMDSI+ N TWEL DLP K IG KW+F+RKYH D ++ YKARLVAKG+RQ
Sbjct: 863 WKEAVNDEMDSIMGNGTWELADLPKGKKPIGSKWIFKRKYHPDGSISAYKARLVAKGYRQ 922
Query: 1950 KQGIDYFDT 1924
++G+DYFDT
Sbjct: 923 REGVDYFDT 931
Score = 100 bits (250), Expect(3) = 0.0
Identities = 60/141 (42%), Positives = 85/141 (60%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNVIIESKDVEFFEHLLTKGNRFQNPHSGEALGE 2381
LG R K F+GYASHSK+YRLL+ ES +++ES+DVEFFE+ ++ + N G
Sbjct: 735 LGERAFKSVFIGYASHSKSYRLLDDESGIVVESRDVEFFENKFSRDDENSN---GTTTSS 791
Query: 2380 PSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEVVRMIP 2201
S++ V QPS + E RKS RVRK KS G + YLV+G + +V+R +
Sbjct: 792 TSEKRV-QPSPIV-----EEPRKSTRVRKEKSYGDD------FFSYLVEGTQKKVMREVI 839
Query: 2200 IVLQVEDDPKMFKDVMASRDA 2138
+ ++DDPK F + M+SRDA
Sbjct: 840 FAVNLDDDPKTFNEAMSSRDA 860
>CAN76080.1 hypothetical protein VITISV_008975, partial [Vitis vinifera]
Length = 389
Score = 557 bits (1435), Expect = 0.0
Identities = 272/365 (74%), Positives = 314/365 (86%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T+A VAR TS+RI+FALASI+NL+VHQ+DVKT FLNGDL++EVYMEQPEGFVL NE+KV
Sbjct: 25 TYAPVARTTSIRILFALASIHNLFVHQMDVKTAFLNGDLNEEVYMEQPEGFVLLGNENKV 84
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKLVKSLY LKQA KQWHEKFD ILS GF+HN DKC+Y +TCD+Y+V++ LYVDDMLI
Sbjct: 85 CKLVKSLYGLKQAXKQWHEKFDHAILSDGFRHNNVDKCLYSKTCDDYMVIVCLYVDDMLI 144
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+S+ M G+ ETKRFLSSTFKMKDLG+VDTI GIKVKRNSGGY L+Q+HYIEKV+ KFSHL
Sbjct: 145 LSBDMRGIIETKRFLSSTFKMKDLGEVDTILGIKVKRNSGGYALNQTHYIEKVVSKFSHL 204
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K K+ + PFD +IKL KNDGR+VAQLE+ASAIGSLMYA QCTR DI+FAVSKLSRFTSNP
Sbjct: 205 KIKDANTPFDSSIKLEKNDGRSVAQLEYASAIGSLMYAAQCTRADISFAVSKLSRFTSNP 264
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
S EH KAIGRVLGYLK T++L +QYSKFP I+EGY+D SWI S+G+N TTGWVFTLGGG
Sbjct: 265 SVEHWKAIGRVLGYLKNTKELSLQYSKFPAIIEGYSDASWISSVGDNLSTTGWVFTLGGG 324
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A SW KKQTCI+HSTME EFIALA T KEA WLRD +++I T+ N+S V I CDSQAT
Sbjct: 325 AXSWGSKKQTCISHSTMEXEFIALAATGKEAXWLRDLMMDIPFTANNVSTVSIHCDSQAT 384
Query: 848 LARAY 834
LA AY
Sbjct: 385 LAXAY 389
>KYP64289.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1012
Score = 464 bits (1193), Expect(3) = e-163
Identities = 229/426 (53%), Positives = 311/426 (73%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T A VARI+S+R++ ALASI+ L +HQ+DVKT FLNG+L++E+YM QPEG +P E+KV
Sbjct: 574 TFAPVARISSIRVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKV 633
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
C+L+KSLY LKQAPKQWHEKFD+ +L+ GF + ADKCVY ++ ++ V+I LYVDDMLI
Sbjct: 634 CRLLKSLYGLKQAPKQWHEKFDQVLLNDGFSSSSADKCVYTKSMNDDCVIICLYVDDMLI 693
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
D V +TK FL+S F MKD+G+ I G+KV R +LSQ HY+E++LKKF +
Sbjct: 694 FGTCDDIVFKTKSFLASNFDMKDMGEASVILGVKVVRKGDSILLSQGHYVERLLKKFDYY 753
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K V+ P+D N +L +N G ++AQ ++A IGSL++ +R DIA+AVS+LSR+T P
Sbjct: 754 DCKSVTTPYDVNSQLKQNKGDSLAQSQYAQIIGSLLHLMNFSRPDIAYAVSRLSRYTHCP 813
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+ +H +A+ R++ YL+ T D GI+YS FP +LEGY+D +WI E K T+G+VFTLGGG
Sbjct: 814 NQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSDETKSTSGYVFTLGGG 873
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
AI+W+ +Q+ I STMESEF+AL T EAEWLR+FL I L K V I CD+Q+
Sbjct: 874 AIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSA 933
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
+A A +++YNGK+RHI LRH+ V++L+KDG IS+ YV+S GNLADP TKP R M+ +TS
Sbjct: 934 IAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPLTKPLGRKMIYETS 993
Query: 668 NLMGLK 651
MGLK
Sbjct: 994 RGMGLK 999
Score = 107 bits (267), Expect(3) = e-163
Identities = 47/70 (67%), Positives = 57/70 (81%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AIR E+DSI N+TW LVDLP +K IGCKW+F+RKY+ D ++ YKARLVAKGF
Sbjct: 505 FWKEAIRIEIDSIKENNTWTLVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFT 564
Query: 1953 QKQGIDYFDT 1924
QKQ ID+FDT
Sbjct: 565 QKQDIDFFDT 574
Score = 57.4 bits (137), Expect(3) = e-163
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLES-----NVIIESKDVEFFEHLLTKGNRFQNPHSG 2396
+GP+ C F+GYA S AYR L L+S N I+E+K+ EFFE++ + +
Sbjct: 392 IGPKTSDCMFIGYAERSAAYRFLVLKSSVIDCNTIVETKNAEFFENIFPLKSSINTSST- 450
Query: 2395 EALGEPSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEV 2216
+PS +E S M + R+SKR RK S G + FY
Sbjct: 451 ----QPSP--LETSSEHMF----EDLRRSKRQRKETSFGSD--------FY--------- 483
Query: 2215 VRMIPIVLQVEDDPKMFKDVMASRDAVF 2132
VE+DP F + ++S DA+F
Sbjct: 484 ------TYLVENDPISFSEAISSSDAIF 505
>KYP54652.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 900
Score = 462 bits (1188), Expect(3) = e-161
Identities = 228/426 (53%), Positives = 311/426 (73%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T A VARI+S+R++ ALASI+ L +HQ+DVKT FLNG+L++E+YM QPEG +P E+KV
Sbjct: 462 TFAPVARISSIRVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKV 521
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
C+L+KSLY LKQAPKQWHEKFD+ +L+ GF + AD+CVY ++ ++ V+I LYVDDMLI
Sbjct: 522 CRLLKSLYGLKQAPKQWHEKFDQVLLNDGFSSSSADRCVYTKSMNDDCVIICLYVDDMLI 581
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
D V +TK FL+S F MKD+G+ I G+KV R +LSQ HY+E++LKKF +
Sbjct: 582 FGTCDDIVFKTKSFLASNFDMKDMGEASVILGVKVVRKGDSILLSQGHYVERLLKKFDYY 641
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K V+ P+D N +L +N G ++AQ ++A IGSL++ +R DIA+AVS+LSR+T P
Sbjct: 642 DCKSVTTPYDVNSQLKQNKGDSLAQSQYAQIIGSLLHLMNFSRPDIAYAVSRLSRYTHCP 701
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+ +H +A+ R++ YL+ T D GI+YS FP +LEGY+D +WI E K T+G+VFTLGGG
Sbjct: 702 NQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSDETKSTSGYVFTLGGG 761
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
AI+W+ +Q+ I STMESEF+AL T EAEWLR+FL I L K V I CD+Q+
Sbjct: 762 AIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLENIPLGMKPTPSVSIHCDNQSA 821
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
+A A +++YNGK+RHI LRH+ V++L+KDG IS+ YV+S GNLADP TKP R M+ +TS
Sbjct: 822 IAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPLTKPLGRKMIYETS 881
Query: 668 NLMGLK 651
MGLK
Sbjct: 882 RGMGLK 887
Score = 107 bits (267), Expect(3) = e-161
Identities = 47/70 (67%), Positives = 57/70 (81%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AIR E+DSI N+TW LVDLP +K IGCKW+F+RKY+ D ++ YKARLVAKGF
Sbjct: 393 FWKEAIRIEIDSIKENNTWTLVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFT 452
Query: 1953 QKQGIDYFDT 1924
QKQ ID+FDT
Sbjct: 453 QKQDIDFFDT 462
Score = 53.9 bits (128), Expect(3) = e-161
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLES-----NVIIESKDVEFFEHLLTKGNRFQNPHSG 2396
+GP+ C F+GYA S AYR L +S N I+E+ + EFFE++ + +
Sbjct: 280 IGPKTSDCMFIGYAERSAAYRFLVFKSSVIDCNTIVETNNAEFFENIFPLKSSINTSST- 338
Query: 2395 EALGEPSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEV 2216
+PS +E S M + R+SKR RK S G + FY
Sbjct: 339 ----QPSP--LETSSEHMF----EDLRRSKRQRKETSFGSD--------FY--------- 371
Query: 2215 VRMIPIVLQVEDDPKMFKDVMASRDAVF 2132
VE+DP F + ++S DA+F
Sbjct: 372 ------TYLVENDPISFSEAISSSDAIF 393
>KYP64290.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1215
Score = 436 bits (1121), Expect(3) = e-155
Identities = 221/426 (51%), Positives = 299/426 (70%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T A VARI+S+R++ ALASI+ L +HQ+DVKT FLNG+L++E+YM QPEG +P E+KV
Sbjct: 799 TFAPVARISSIRVLIALASIHRLVIHQMDVKTAFLNGELEEEIYMTQPEGCEVPGQENKV 858
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
C+L+KSLY LKQAPKQWHEKFD+ +L+ GF + AD+CVY + D+ V+I LYVDDMLI
Sbjct: 859 CRLLKSLYGLKQAPKQWHEKFDQVLLNDGFSSSSADRCVYTKCMDDDCVIICLYVDDMLI 918
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
D V +TK FL+S F MKD+G HY+E++LKKF +
Sbjct: 919 FGTCDDIVFKTKSFLASNFDMKDMG----------------------HYVERLLKKFDYY 956
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K V+ P+D N +L +N G ++AQ ++A IGSL++ +R DIA+AVS+LSR+T P
Sbjct: 957 DCKSVTTPYDVNSQLKQNKGDSLAQSQYAQIIGSLLHLMNFSRPDIAYAVSRLSRYTHCP 1016
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+ +H +A+ R++ YL+ T D GI+YS FP +LEGY+D +WI E K T+G+VFTLGGG
Sbjct: 1017 NQDHWEALARLMRYLRGTMDYGIEYSGFPAVLEGYSDANWISDSDETKSTSGYVFTLGGG 1076
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
AI+W+ +Q+ I STMESEF+AL T EAEWLR+FL I L K V I CD+Q+
Sbjct: 1077 AIAWRSVRQSIIARSTMESEFVALEMTSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSA 1136
Query: 848 LARAYSETYNGKSRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKTS 669
+A A +++YNGK+RHI LRH+ V++L+KDG IS+ YV+S GNLADP TKP R M+ +TS
Sbjct: 1137 IAIAKNKSYNGKNRHIQLRHNIVKQLLKDGTISINYVKSEGNLADPLTKPLGRKMIYETS 1196
Query: 668 NLMGLK 651
MGLK
Sbjct: 1197 RGMGLK 1202
Score = 107 bits (267), Expect(3) = e-155
Identities = 47/70 (67%), Positives = 57/70 (81%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
FWK+AIR E+DSI N+TW LVDLP +K IGCKW+F+RKY+ D ++ YKARLVAKGF
Sbjct: 730 FWKEAIRIEIDSIKENNTWTLVDLPKGAKPIGCKWIFKRKYNPDGSIEKYKARLVAKGFT 789
Query: 1953 QKQGIDYFDT 1924
QKQ ID+FDT
Sbjct: 790 QKQDIDFFDT 799
Score = 57.4 bits (137), Expect(3) = e-155
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLES-----NVIIESKDVEFFEHLLTKGNRFQNPHSG 2396
+GP+ C F+GYA S AYR L L+S N I+E+K+ EFFE++ + +
Sbjct: 617 IGPKTSDCMFIGYAERSAAYRFLVLKSSVIDCNTIVETKNAEFFENIFPLKSSINTSST- 675
Query: 2395 EALGEPSQEIVEQPSSQMIGQQSNEQRKSKRVRKAKSLGPNEVDSQRISFYLVKGNRDEV 2216
+PS +E S M + R+SKR RK S G + FY
Sbjct: 676 ----QPSP--LETSSEHMF----EDLRRSKRQRKETSFGSD--------FY--------- 708
Query: 2215 VRMIPIVLQVEDDPKMFKDVMASRDAVF 2132
VE+DP F + ++S DA+F
Sbjct: 709 ------TYLVENDPISFSEAISSSDAIF 730
>AAR01682.1 putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 441 bits (1134), Expect(3) = e-154
Identities = 221/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFVL E KV
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKV 933
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 934 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 993
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 994 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1053
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1054 DSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1113
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1114 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1173
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1294 SKEMGLR 1300
Score = 99.4 bits (246), Expect(3) = e-154
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 865 QKEGEDFFDT 874
Score = 57.8 bits (138), Expect(3) = e-154
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 675 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 730
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 731 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 782
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 783 TVYL-----------------VDDTPKSISEAYASPDA 803
>AAT44162.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 440 bits (1132), Expect(3) = e-154
Identities = 220/427 (51%), Positives = 297/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFV+ E KV
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 933
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 934 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 993
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 994 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1053
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1054 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1113
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+++P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1114 GDDHWRALERVMRYLKGTVELGLHYTRYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1173
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKLVPAILMNCDNQTV 1233
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1294 SKEMGLR 1300
Score = 99.4 bits (246), Expect(3) = e-154
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 865 QKEGEDFFDT 874
Score = 57.8 bits (138), Expect(3) = e-154
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 675 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 730
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 731 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 782
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 783 TVYL-----------------VDDTPKSISEAYASPDA 803
>AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 439 bits (1130), Expect(3) = e-153
Identities = 220/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFVL E KV
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVLEGQEGKV 933
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 934 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 993
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 994 FGTNIEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1053
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1054 DSKPSPTPYDPSLSLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1113
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1114 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1173
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + + N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1234 IVKVNNSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1294 SKEMGLR 1300
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 865 QKEGEDFFDT 874
Score = 57.8 bits (138), Expect(3) = e-153
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 675 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 730
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 731 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 782
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 783 TVYL-----------------VDDTPKSISEAYASPDA 803
>ABF96702.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1518
Score = 439 bits (1129), Expect(3) = e-153
Identities = 220/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFV+ E KV
Sbjct: 1090 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1149
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 1150 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 1209
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 1210 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1269
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1270 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1329
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1330 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1389
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1390 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1449
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1450 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1509
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1510 SKEMGLR 1516
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 1021 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 1080
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 1081 QKEGEDFFDT 1090
Score = 57.8 bits (138), Expect(3) = e-153
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 891 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 946
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 947 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 998
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 999 TVYL-----------------VDDTPKSISEAYASPDA 1019
>AAU44026.2 putative polyprotein [Oryza sativa Japonica Group]
Length = 1391
Score = 439 bits (1129), Expect(3) = e-153
Identities = 220/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFV+ E KV
Sbjct: 963 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1022
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 1023 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 1082
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 1083 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1142
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1143 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1202
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1203 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1262
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1263 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1322
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1323 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1382
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1383 SKEMGLR 1389
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 894 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 953
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 954 QKEGEDFFDT 963
Score = 57.8 bits (138), Expect(3) = e-153
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 764 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 819
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 820 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 871
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 872 TVYL-----------------VDDTPKSISEAYASPDA 892
>CAD40744.2 OSJNBa0072D21.4 [Oryza sativa Japonica Group]
Length = 1319
Score = 439 bits (1129), Expect(3) = e-153
Identities = 220/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFV+ E KV
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 933
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 934 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 993
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 994 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1053
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1054 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1113
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1114 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1173
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1294 SKEMGLR 1300
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 865 QKEGEDFFDT 874
Score = 57.8 bits (138), Expect(3) = e-153
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 675 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 730
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 731 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 782
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 783 TVYL-----------------VDDTPKSISEAYASPDA 803
>ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 441 bits (1135), Expect(3) = e-153
Identities = 222/427 (51%), Positives = 297/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKTTFLNG+LD+E+YM QP+GFV+ E KV
Sbjct: 874 TYSHVARLTTIRVLLSLAASHGLLVHQMDVKTTFLNGELDEEIYMYQPDGFVVEGQEGKV 933
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 934 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGRGEGVILCLYVDDILI 993
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 994 FKTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1053
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1054 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1113
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1114 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1173
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K +S +L+ CD+Q
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVSAILMNCDNQTV 1233
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1294 SKEMGLR 1300
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 865 QKEGEDFFDT 874
Score = 55.5 bits (132), Expect(3) = e-153
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR ++S V I+ES+D FFE ++ H
Sbjct: 675 LGPKTVDCVFLGYAHHSIAYRFSIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 730
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 731 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 782
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 783 TVYL-----------------VDDTPKSISEAYASPDA 803
>AAP20858.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1302
Score = 439 bits (1129), Expect(3) = e-153
Identities = 220/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFV+ E KV
Sbjct: 874 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 933
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 934 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGGGEGVILCLYVDDILI 993
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 994 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1053
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1054 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1113
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1114 GDDHWRALERVMRYLKGTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1173
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1174 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1233
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1234 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1293
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1294 SKEMGLR 1300
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 805 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 864
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 865 QKEGEDFFDT 874
Score = 57.8 bits (138), Expect(3) = e-153
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 675 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 730
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 731 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 782
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 783 TVYL-----------------VDDTPKSISEAYASPDA 803
>ABA91402.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2027
Score = 439 bits (1128), Expect(3) = e-153
Identities = 220/427 (51%), Positives = 296/427 (69%), Gaps = 1/427 (0%)
Frame = -1
Query: 1928 THAQVARITSVRIMFALASIYNLYVHQIDVKTTFLNGDLDDEVYMEQPEGFVLPENEHKV 1749
T++ VAR+T++R++ +LA+ + L VHQ+DVKT FLNG+LD+E+YM+QP+GFV+ E KV
Sbjct: 1069 TYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKV 1128
Query: 1748 CKLVKSLYDLKQAPKQWHEKFDKTILSYGFKHNVADKCVYIRTCDNYVVLIYLYVDDMLI 1569
CKL+KSLY LKQAPKQWHEKFDKT+ S GF N ADKCVY R V++ LYVDD+LI
Sbjct: 1129 CKLLKSLYGLKQAPKQWHEKFDKTLTSAGFGVNEADKCVYYRHGGGEGVILCLYVDDILI 1188
Query: 1568 VSNHMDGVTETKRFLSSTFKMKDLGQVDTIFGIKVKRNSGGYVLSQSHYIEKVLKKFSHL 1389
+++ + E K FLS F MKDLG D I IK+ R G L QSHY+EK+L +F ++
Sbjct: 1189 FGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNRFGYI 1248
Query: 1388 KFKEVSFPFDPNIKLIKNDGRAVAQLEFASAIGSLMYATQCTRLDIAFAVSKLSRFTSNP 1209
K P+DP++ L KN A QLE++ IGSLMY TR DI+FAVSKLSRFTSNP
Sbjct: 1249 DSKPSPTPYDPSLLLRKNKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNP 1308
Query: 1208 SSEH*KAIGRVLGYLKRTRDLGIQYSKFPGILEGYTDVSWILSLGENKFTTGWVFTLGGG 1029
+H +A+ RV+ YLK T +LG+ Y+ +P +LEGY+D +WI + E K T+G+VFTLGGG
Sbjct: 1309 GDDHWRALERVMRYLKDTVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGG 1368
Query: 1028 AISWKFKKQTCITHSTMESEFIALAETRKEAEWLRDFLIEISLTSKNISLVLILCDSQAT 849
A+SW+ KQT +T STME+E AL EAEWLRD L+++ + K + +L+ CD+Q
Sbjct: 1369 AVSWRSCKQTILTRSTMEAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTV 1428
Query: 848 LARAYSETYNGK-SRHISLRHDYVRKLIKDGIISLTYVRSCGNLADPFTKPPSRDMVIKT 672
+ + S N K SRH+ R VRKL G+I+L Y+++ NLADPFTK SR+++
Sbjct: 1429 IVKVNSSKDNMKSSRHVKRRLKSVRKLRNSGVITLDYIQTARNLADPFTKGLSRNVIDNA 1488
Query: 671 SNLMGLK 651
S MGL+
Sbjct: 1489 SKEMGLR 1495
Score = 99.4 bits (246), Expect(3) = e-153
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -3
Query: 2133 FWKDAIRDEMDSIISNHTWELVDLPSSSKSIGCKWVFRRKYHTDSTLHTYKARLVAKGFR 1954
+WK+A+R EMDSII+N TWE+ + P K +GCKWVF++K D T+ YKARLVAKG+
Sbjct: 1000 YWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYT 1059
Query: 1953 QKQGIDYFDT 1924
QK+G D+FDT
Sbjct: 1060 QKEGEDFFDT 1069
Score = 57.8 bits (138), Expect(3) = e-153
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Frame = -2
Query: 2560 LGPRGIKCAFVGYASHSKAYRLLNLESNV-------IIESKDVEFFEHLLTKGNRFQNPH 2402
LGP+ + C F+GYA HS AYR L ++S V I+ES+D FFE ++ H
Sbjct: 870 LGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESFFP----MKDTH 925
Query: 2401 SGEALGEPSQEIVE--------QPSSQMIGQQ--SNEQRKSKRVRKAKSLGPNEVDSQRI 2252
SG +PS+ I + + +++ ++ S R+SKR R AKS G +
Sbjct: 926 SGS--NQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDD------F 977
Query: 2251 SFYLVKGNRDEVVRMIPIVLQVEDDPKMFKDVMASRDA 2138
+ YL V+D PK + AS DA
Sbjct: 978 TVYL-----------------VDDTPKSISEAYASPDA 998