BLASTX nr result
ID: Panax24_contig00013726
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00013726
(419 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI33662.3 unnamed protein product, partial [Vitis vinifera] 84 1e-17
XP_002283616.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 84 1e-17
XP_017250144.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 80 3e-16
XP_019182997.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 80 4e-16
XP_019182999.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 77 6e-15
XP_016471783.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 1e-14
XP_018815481.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 1e-14
XP_019249277.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 1e-14
XP_009763742.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 76 1e-14
XP_007215996.1 hypothetical protein PRUPE_ppa011873mg [Prunus pe... 76 2e-14
XP_008230398.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 75 4e-14
XP_009615234.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 74 6e-14
XP_015962940.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 74 6e-14
KVI02804.1 Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculus va... 74 7e-14
XP_010263402.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 74 1e-13
XP_019053207.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 73 3e-13
XP_016194781.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 72 3e-13
XP_015962939.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 72 7e-13
XP_004304135.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 72 7e-13
XP_009357057.1 PREDICTED: 30S ribosomal protein 3, chloroplastic... 71 2e-12
>CBI33662.3 unnamed protein product, partial [Vitis vinifera]
Length = 175
Score = 84.0 bits (206), Expect = 1e-17
Identities = 50/115 (43%), Positives = 69/115 (60%)
Frame = -1
Query: 347 MAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXX 168
MA++P PN +L++ + FP+ R + S + + S +T +R
Sbjct: 4 MAVQPNPNAALKS-----YTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLRLRASPAPV 58
Query: 167 XXXALDQESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
A+ ++S A S S++PL+ EKL VVVKPMEKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 59 VAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQ 113
>XP_002283616.1 PREDICTED: 30S ribosomal protein 3, chloroplastic [Vitis vinifera]
Length = 176
Score = 84.0 bits (206), Expect = 1e-17
Identities = 50/115 (43%), Positives = 69/115 (60%)
Frame = -1
Query: 347 MAMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXX 168
MA++P PN +L++ + FP+ R + S + + S +T +R
Sbjct: 5 MAVQPNPNAALKS-----YTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLRLRASPAPV 59
Query: 167 XXXALDQESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
A+ ++S A S S++PL+ EKL VVVKPMEKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 60 VAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVALDQ 114
>XP_017250144.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Daucus
carota subsp. sativus] XP_017250145.1 PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Daucus carota
subsp. sativus]
Length = 182
Score = 80.5 bits (197), Expect = 3e-16
Identities = 53/111 (47%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = -1
Query: 332 TPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXXXXXAL 153
T C+ LP R + P SI + P IS + KIRHF
Sbjct: 18 TTYCNNHLLPIRRQLHP----SPSIHLNPLIRVLPHSISGNNNNKIRHFYASSAAAAV-- 71
Query: 152 DQESIAND-NSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
E+ +D +S SS PL+S+KL VVVKPMEKPRLVLKF+WMEKNIGLALDQ
Sbjct: 72 --ETFTDDYDSDSSTPLQSKKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQ 120
>XP_019182997.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Ipomoea nil]
Length = 176
Score = 80.1 bits (196), Expect = 4e-16
Identities = 53/116 (45%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = -1
Query: 344 AMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIR--HFXXXXX 171
A +P NC LE+ P + F K FFP P + P+ R +
Sbjct: 6 AARPAVNCILES-PASSFS-----SHKPFLPNKLFFPQPPTAASQPSLLSRKLYVSASSS 59
Query: 170 XXXXALDQESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
AL QE+ A S SS PL EKL VVVKPMEKPRLVLKFIW+EKNIG++LDQ
Sbjct: 60 AAVDALSQETSAK-GSFSSTPLHKEKLGVVVKPMEKPRLVLKFIWLEKNIGISLDQ 114
>XP_019182999.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X2
[Ipomoea nil]
Length = 165
Score = 76.6 bits (187), Expect = 6e-15
Identities = 49/114 (42%), Positives = 58/114 (50%)
Frame = -1
Query: 344 AMKPTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXXX 165
A +P NC LE+ P + F K FFP P + P+ R
Sbjct: 6 AARPAVNCILES-PASSFS-----SHKPFLPNKLFFPQPPTAASQPSLLSRKLYV----- 54
Query: 164 XXALDQESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
S + S SS PL EKL VVVKPMEKPRLVLKFIW+EKNIG++LDQ
Sbjct: 55 -----SASSSAAGSFSSTPLHKEKLGVVVKPMEKPRLVLKFIWLEKNIGISLDQ 103
>XP_016471783.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tabacum]
Length = 173
Score = 76.3 bits (186), Expect = 1e-14
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -1
Query: 137 ANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+ NS SSAPL+ EKL VVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 STQNSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_018815481.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Juglans
regia] XP_018815483.1 PREDICTED: 30S ribosomal protein
3, chloroplastic-like [Juglans regia] XP_018815484.1
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
[Juglans regia] XP_018815485.1 PREDICTED: 30S ribosomal
protein 3, chloroplastic-like [Juglans regia]
Length = 188
Score = 76.3 bits (186), Expect = 1e-14
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 8/124 (6%)
Frame = -1
Query: 350 PMAMKPTPNCSLETLPQTRFMFPIQPPRKS-IFVKS-----SFFPSPMRISCSPTTKIRH 189
PMA++P + SL+ L F ++P K+ IF + S P R S S T+I
Sbjct: 3 PMAIQPNLSPSLKPLAFPLQSFFLKPFEKAPIFARPHSLSHSVLKQPSRHSHSQRTRIFK 62
Query: 188 FXXXXXXXXXA--LDQESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGL 15
+ ++++++D+S S +P + EKL VVVK +EKPRLVLKFIWMEKNIG+
Sbjct: 63 LSASASAEAAEAAVAEDTLSDDDSPSESPPDKEKLGVVVKSLEKPRLVLKFIWMEKNIGI 122
Query: 14 ALDQ 3
ALDQ
Sbjct: 123 ALDQ 126
>XP_019249277.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
attenuata] OIT00007.1 30s ribosomal protein 3,
chloroplastic [Nicotiana attenuata]
Length = 173
Score = 75.9 bits (185), Expect = 1e-14
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = -1
Query: 146 ESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
E + +S SSAPL+ EKL VVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 64 EETSTQDSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_009763742.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
sylvestris] XP_016436838.1 PREDICTED: 30S ribosomal
protein 3, chloroplastic-like [Nicotiana tabacum]
Length = 173
Score = 75.9 bits (185), Expect = 1e-14
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = -1
Query: 146 ESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
E + +S SSAPL+ EKL VVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 64 EETSTQDSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_007215996.1 hypothetical protein PRUPE_ppa011873mg [Prunus persica] ONI18775.1
hypothetical protein PRUPE_3G238100 [Prunus persica]
Length = 192
Score = 75.9 bits (185), Expect = 2e-14
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -1
Query: 272 PRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXXXXXALDQESIANDNSASSAPLESEK 93
PR S F S S +++ + TT R+ ++ + A+DN + PLE EK
Sbjct: 44 PRTSNFSVSHSL-SELKLRLTQTT--RNVKLSAAAESLVAEETAAADDNLTTETPLEKEK 100
Query: 92 LKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
L VVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 101 LGVVVKPIEKPRLVLKFIWMEKNIGIALDQ 130
>XP_008230398.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Prunus
mume]
Length = 192
Score = 75.1 bits (183), Expect = 4e-14
Identities = 43/90 (47%), Positives = 56/90 (62%)
Frame = -1
Query: 272 PRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXXXXXALDQESIANDNSASSAPLESEK 93
PR S F S P +++ + TT R+ ++++ A+DN + LE EK
Sbjct: 44 PRTSTFSVSHSLPE-LKLRLTETT--RNVKLSAAAESLVAEEKAAADDNLTTETLLEKEK 100
Query: 92 LKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
L VVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 101 LGVVVKPIEKPRLVLKFIWMEKNIGIALDQ 130
>XP_009615234.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Nicotiana
tomentosiformis] XP_009604408.1 PREDICTED: 30S ribosomal
protein 3, chloroplastic-like [Nicotiana
tomentosiformis]
Length = 173
Score = 74.3 bits (181), Expect = 6e-14
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = -1
Query: 137 ANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+ +S SSAPL+ EKL VVVKP+EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 STQDSVSSAPLQKEKLGVVVKPLEKPRLVLKFIWMEKNIGIALDQ 111
>XP_015962940.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X2
[Arachis duranensis]
Length = 178
Score = 74.3 bits (181), Expect = 6e-14
Identities = 49/115 (42%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Frame = -1
Query: 335 PTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPT---TKIRHFXXXXXXX 165
PT + T P P++P +K+S FP+P S T +K+ F
Sbjct: 13 PTLSLKPSTFPSQSQSLPLRP------LKASSFPNPKPFFSSLTPNPSKLSVFAAQSETA 66
Query: 164 XXALDQESIANDNSASS-APLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
Q+ +A D++ SS +P + +KL VVVKP EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 -----QQIVAEDDATSSDSPPQPQKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQ 116
>KVI02804.1 Ribosomal protein PSRP-3/Ycf65 [Cynara cardunculus var. scolymus]
Length = 168
Score = 73.9 bits (180), Expect = 7e-14
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = -1
Query: 122 ASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
A+ PLESEKL VVVKPMEKPRLVLKFIWMEKNIGLALDQ
Sbjct: 67 AAETPLESEKLGVVVKPMEKPRLVLKFIWMEKNIGLALDQ 106
>XP_010263402.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Nelumbo nucifera]
Length = 188
Score = 73.9 bits (180), Expect = 1e-13
Identities = 47/111 (42%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Frame = -1
Query: 299 TRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKI------RHFXXXXXXXXXALDQESI 138
TR FP + + SF P P + SP + + +E
Sbjct: 16 TRSSFPQKFGFNPVNASISFNPKPASLHLSPLVHLIRRPNRKQLRLSTSASAAEAIEEEA 75
Query: 137 ANDNSASSAPLESE------KLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
++SAS+ P ESE KL VVVKPMEKPRLVLKF+WMEKNIGLALDQ
Sbjct: 76 TTEDSASTTPQESEPFEEKEKLGVVVKPMEKPRLVLKFVWMEKNIGLALDQ 126
>XP_019053207.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X2
[Nelumbo nucifera]
Length = 187
Score = 72.8 bits (177), Expect = 3e-13
Identities = 46/110 (41%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Frame = -1
Query: 299 TRFMFPIQPPRKSIFVKSSFFPSPMRISCSPTTKI------RHFXXXXXXXXXALDQESI 138
TR FP + + SF P P + SP + + +E
Sbjct: 16 TRSSFPQKFGFNPVNASISFNPKPASLHLSPLVHLIRRPNRKQLRLSTSASAAEAIEEEA 75
Query: 137 ANDNSASSAPLESE-----KLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
++SAS+ P ESE +L VVVKPMEKPRLVLKF+WMEKNIGLALDQ
Sbjct: 76 TTEDSASTTPQESEPFEEKELGVVVKPMEKPRLVLKFVWMEKNIGLALDQ 125
>XP_016194781.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Arachis
ipaensis]
Length = 178
Score = 72.4 bits (176), Expect = 3e-13
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Frame = -1
Query: 335 PTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPT---TKIRHFXXXXXXX 165
PT + T P ++P +K+S FP+P S T +K+ F
Sbjct: 13 PTLSLKPSTFPSQSQSLTLRP------LKASSFPNPKPFFSSSTPNPSKLSAFAAQSETA 66
Query: 164 XXALDQESIANDNSASS-APLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
Q+ +A D++ SS +P + +KL VVVKP EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 -----QQIVAEDDATSSDSPPQPQKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQ 116
>XP_015962939.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform X1
[Arachis duranensis]
Length = 182
Score = 71.6 bits (174), Expect = 7e-13
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Frame = -1
Query: 335 PTPNCSLETLPQTRFMFPIQPPRKSIFVKSSFFPSPMRISCSPT---TKIRHFXXXXXXX 165
PT + T P P++P +K+S FP+P S T +K+ F
Sbjct: 13 PTLSLKPSTFPSQSQSLPLRP------LKASSFPNPKPFFSSLTPNPSKLSVFAAQSETA 66
Query: 164 XXALDQESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+ ++ + +S + +KL VVVKP EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 67 QQIVAEDDATSSDSPPQPQPQPQKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQ 120
>XP_004304135.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 182
Score = 71.6 bits (174), Expect = 7e-13
Identities = 46/90 (51%), Positives = 54/90 (60%)
Frame = -1
Query: 272 PRKSIFVKSSFFPSPMRISCSPTTKIRHFXXXXXXXXXALDQESIANDNSASSAPLESEK 93
PR++ SSFF S P K+R + QE+ A+D S A +EK
Sbjct: 37 PRRTTSPSSSFFIS----HSLPHLKLRTDFKLSAAAEALVAQETAADD--VSPADDGTEK 90
Query: 92 LKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
L VVVKPMEKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 91 LGVVVKPMEKPRLVLKFIWMEKNIGIALDQ 120
>XP_009357057.1 PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Pyrus x
bretschneideri]
Length = 189
Score = 70.9 bits (172), Expect = 2e-12
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = -1
Query: 149 QESIANDNSASSAPLESEKLKVVVKPMEKPRLVLKFIWMEKNIGLALDQ 3
+E+ +D +A +AP E EKL VVVKP EKPRLVLKFIWMEKNIG+ALDQ
Sbjct: 80 EETATDDEAADTAP-EKEKLGVVVKPFEKPRLVLKFIWMEKNIGIALDQ 127