BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00013606
         (1882 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017241744.1 PREDICTED: probable RNA-dependent RNA polymerase ...   629   0.0  
XP_017249058.1 PREDICTED: probable RNA-dependent RNA polymerase ...   537   0.0  
XP_009780069.1 PREDICTED: probable RNA-dependent RNA polymerase ...   526   e-177
XP_016454734.1 PREDICTED: probable RNA-dependent RNA polymerase ...   526   e-177
XP_016511895.1 PREDICTED: probable RNA-dependent RNA polymerase ...   525   e-176
CDP03268.1 unnamed protein product [Coffea canephora]                 531   e-176
XP_009780070.1 PREDICTED: probable RNA-dependent RNA polymerase ...   519   e-175
XP_009592436.1 PREDICTED: probable RNA-dependent RNA polymerase ...   522   e-175
XP_016511902.1 PREDICTED: probable RNA-dependent RNA polymerase ...   519   e-174
XP_015163796.1 PREDICTED: probable RNA-dependent RNA polymerase ...   520   e-174
XP_010322170.1 PREDICTED: probable RNA-dependent RNA polymerase ...   520   e-174
XP_009592437.1 PREDICTED: probable RNA-dependent RNA polymerase ...   516   e-173
XP_018815684.1 PREDICTED: probable RNA-dependent RNA polymerase ...   490   e-172
XP_006353487.1 PREDICTED: probable RNA-dependent RNA polymerase ...   497   e-172
XP_015077971.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe...   513   e-171
XP_006338861.1 PREDICTED: probable RNA-dependent RNA polymerase ...   520   e-171
XP_019190390.1 PREDICTED: probable RNA-dependent RNA polymerase ...   492   e-171
XP_015059191.1 PREDICTED: probable RNA-dependent RNA polymerase ...   494   e-170
XP_011093632.1 PREDICTED: probable RNA-dependent RNA polymerase ...   496   e-170
CDP03267.1 unnamed protein product [Coffea canephora]                 506   e-170

>XP_017241744.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1 [Daucus
            carota subsp. sativus] XP_017241745.1 PREDICTED: probable
            RNA-dependent RNA polymerase 3 isoform X2 [Daucus carota
            subsp. sativus] KZN01938.1 hypothetical protein
            DCAR_010692 [Daucus carota subsp. sativus]
          Length = 1050

 Score =  629 bits (1623), Expect(2) = 0.0
 Identities = 322/459 (70%), Positives = 367/459 (79%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIELEYKSSEGRVTDAHVREPPLLMQCRLFHNGFA 180
            TGFISEDLAMKCPR   +A+Y K +  E+E  S EG++TDAHVREPPLLMQCRLFHNG A
Sbjct: 463  TGFISEDLAMKCPRALLSARYRKAKESEMEDASLEGKLTDAHVREPPLLMQCRLFHNGLA 522

Query: 181  VKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTTLSRYLIA 360
            VKGTLL+NRKLP GTIQIR SMVKVEAD     APS+NSLEVV IS KP ++ LS+YLIA
Sbjct: 523  VKGTLLVNRKLPLGTIQIRPSMVKVEADPNFEGAPSINSLEVVNISRKPGKSRLSKYLIA 582

Query: 361  LLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMILSGVPLD 540
            LL  GGVP+Q F+++L  ALED+Q LFS++ +AVR S+NH  +DDD TTARMILSGVPLD
Sbjct: 583  LLYLGGVPEQFFMNILADALEDSQRLFSDKRSAVRASVNHGTIDDDFTTARMILSGVPLD 642

Query: 541  EPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHENGPICGKV 720
            EPCVQ+RLS LA  ERKGL+ G+LPIS+SF+LMGTADPTGLLNSDEV VI +NG + GKV
Sbjct: 643  EPCVQHRLSHLAYSERKGLRQGRLPISESFFLMGTADPTGLLNSDEVCVILDNGQVSGKV 702

Query: 721  LVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGDFDGDMYW 900
            LVYR PGLHFGDIH+LNAVYLKELEDVVGNAKYGIFFSTKG+RSVASEIANGDFDGDMYW
Sbjct: 703  LVYRFPGLHFGDIHVLNAVYLKELEDVVGNAKYGIFFSTKGERSVASEIANGDFDGDMYW 762

Query: 901  VSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQNISMGVA 1080
            VSRN QLL  FK S PWTRMH SP  FQ KPS+ P+D           +TK QNISMGVA
Sbjct: 763  VSRNNQLLHYFKKSTPWTRMHPSPNKFQVKPSDIPNDELEHKLFKLFLDTKNQNISMGVA 822

Query: 1081 ADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPNHLKADIY 1260
            ADSW+AFMD+ LTL DD + EKN+L K +L LIDIYYDALDAPKTGK+V +P   +AD Y
Sbjct: 823  ADSWMAFMDKFLTL-DDNSVEKNKLKKTILKLIDIYYDALDAPKTGKEVTIPKEYRADSY 881

Query: 1261 PHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            PHYM++ K Y STSVLG I D       ++    EIKKL
Sbjct: 882  PHYMEKGKAYDSTSVLGKICDAVDTYVPKRVLASEIKKL 920



 Score =  155 bits (391), Expect(2) = 0.0
 Identities = 76/128 (59%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
 Frame = +3

Query: 1380 FEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEGS 1559
            FE V IPDA L  WKE YD YR +M  ALS  ++S+   ADDV +KYK+ILY AADFE S
Sbjct: 923  FELVPIPDAKLKFWKEIYDNYRTDMSSALSSTNQSEMKPADDVFSKYKKILYGAADFEQS 982

Query: 1560 SRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADR-PMFLCD 1736
             R  +DIY DA+ALYH CYDYA  + DV+KCNFAW++AG ALC FH  K A++  MF   
Sbjct: 983  PRKWDDIYVDAVALYHACYDYARSKGDVTKCNFAWRIAGHALCNFHVAKSAEKSSMFYSL 1042

Query: 1737 PSVLGKLL 1760
            PSVLG++L
Sbjct: 1043 PSVLGEIL 1050


>XP_017249058.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Daucus carota
            subsp. sativus]
          Length = 1032

 Score =  537 bits (1384), Expect(2) = 0.0
 Identities = 284/464 (61%), Positives = 346/464 (74%), Gaps = 5/464 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIELEYKSSEGRVTDAHVREPPLLMQCRLFHNGFA 180
            TGFISEDLAM CP    NA Y+  +  ++E  + EG + DA+V EPPLL+QCRLFH G A
Sbjct: 444  TGFISEDLAMLCP----NANYISKKKSKMEDGTFEGLI-DAYVNEPPLLIQCRLFHKGRA 498

Query: 181  VKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTTLSRYLIA 360
            VKGTLL+N+KLP  TIQIR SM+KVE D      PS+NSLEVV IS KP  + LS+ LI 
Sbjct: 499  VKGTLLLNKKLPPQTIQIRPSMIKVEVDPTWKGVPSVNSLEVVNISRKPGTSRLSKLLIP 558

Query: 361  LLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMILSGVPLD 540
            LLN GGVP Q FL  L +ALED Q LF N+ +AV+ S+N   LDDD+TTA++ILSGVPL+
Sbjct: 559  LLNIGGVPDQFFLHTLAVALEDTQRLFYNKRSAVKASMNLGTLDDDATTAKIILSGVPLN 618

Query: 541  EPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHENGPICGKV 720
            E CVQ RLS+LA EERKGL+ GKLPIS+SF LMGTADPTGLLNSD+V +I ENG I GKV
Sbjct: 619  EACVQSRLSKLAMEERKGLRKGKLPISESFLLMGTADPTGLLNSDQVCIILENGQISGKV 678

Query: 721  LVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGDFDGDMYW 900
            LVYR+PGLHFGDIH++NAVYL+E+E+VVG+AKYGI FSTKG RSVASEIANGDFDGDMYW
Sbjct: 679  LVYRHPGLHFGDIHVMNAVYLEEMENVVGDAKYGILFSTKGPRSVASEIANGDFDGDMYW 738

Query: 901  VSRNRQLLRDFKASIPWTRMHSS-----PKVFQRKPSEFPSDXXXXXXXXXXXNTKKQNI 1065
            VS+N+QLL+ +K S PW R H S     PK   R+P +F SD           N+K QNI
Sbjct: 739  VSKNKQLLQHYKQSAPWKREHPSSLPKNPKEPPRRPCDFTSDELEHELFELFLNSKNQNI 798

Query: 1066 SMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPNHL 1245
            +MG+AA+SW A+ D+ LT  DD  +EK  L +KML LID+YYDALDAPK+G++V++P  L
Sbjct: 799  TMGIAANSWQAWTDKFLTASDD--DEKKYLKEKMLKLIDLYYDALDAPKSGEEVMIPREL 856

Query: 1246 KADIYPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             A  +PHYM++ KEYHS SVLG I       +++  S  EI+KL
Sbjct: 857  IAGSFPHYMEQSKEYHSCSVLGQICAAVEKFRSKSMSRCEIRKL 900



 Score =  160 bits (404), Expect(2) = 0.0
 Identities = 76/130 (58%), Positives = 98/130 (75%), Gaps = 2/130 (1%)
 Frame = +3

Query: 1380 FEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEGS 1559
            FE V IP A L LWKERYD YR++M DALS N +S+++ A DVINKYK+ILY   DF+ +
Sbjct: 903  FEQVSIPAASLKLWKERYDNYREDMTDALSSNSQSERNLAGDVINKYKEILYGTVDFKAT 962

Query: 1560 SRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKV--ADRPMFLC 1733
            +RN  DI +DALALY+VCYD+A+ + DV+KCNF WKVAGPALC+ +  K   ++R MF  
Sbjct: 963  TRNMNDINEDALALYNVCYDFAKSKGDVAKCNFVWKVAGPALCQIYTTKALNSERSMFYG 1022

Query: 1734 DPSVLGKLLN 1763
             PSVL ++LN
Sbjct: 1023 LPSVLAEILN 1032


>XP_009780069.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris] XP_016454732.1 PREDICTED: probable
            RNA-dependent RNA polymerase 3 isoform X1 [Nicotiana
            tabacum]
          Length = 1023

 Score =  526 bits (1355), Expect(2) = e-177
 Identities = 270/468 (57%), Positives = 346/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 429  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 488

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            L+ NG AVKGT LINRK+    IQIR SMVKVE D  + + P+ NSLEVV IS++PR+T 
Sbjct: 489  LYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLPTFNSLEVVAISNRPRKTY 548

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV ++ F+++L  ALE+ + ++  + AA++V++N+R++DDD   ARMI
Sbjct: 549  LSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMI 608

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 609  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 668

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGI FSTKG RS ASEIANGD
Sbjct: 669  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGD 728

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTR HS+PK   +KP+EF +D             K +
Sbjct: 729  FDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSK 788

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMDRLL L DD A+  + L  KML+LIDIYYDALDAPK+GKKV +P+
Sbjct: 789  GASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPH 848

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 849  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 896



 Score =  127 bits (319), Expect(2) = e-177
 Identities = 64/128 (50%), Positives = 85/128 (66%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD   TLW+ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 898  CFD-VEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 956

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S R TEDI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 957  SVRKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQKEN-AFPIL 1015

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 1016 PSILQDIL 1023


>XP_016454734.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
            [Nicotiana tabacum]
          Length = 813

 Score =  526 bits (1355), Expect(2) = e-177
 Identities = 270/468 (57%), Positives = 346/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 219  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 278

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            L+ NG AVKGT LINRK+    IQIR SMVKVE D  + + P+ NSLEVV IS++PR+T 
Sbjct: 279  LYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLPTFNSLEVVAISNRPRKTY 338

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV ++ F+++L  ALE+ + ++  + AA++V++N+R++DDD   ARMI
Sbjct: 339  LSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMI 398

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 399  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 458

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGI FSTKG RS ASEIANGD
Sbjct: 459  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGD 518

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTR HS+PK   +KP+EF +D             K +
Sbjct: 519  FDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSK 578

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMDRLL L DD A+  + L  KML+LIDIYYDALDAPK+GKKV +P+
Sbjct: 579  GASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPH 638

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 639  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 686



 Score =  127 bits (319), Expect(2) = e-177
 Identities = 64/128 (50%), Positives = 85/128 (66%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD   TLW+ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 688  CFD-VEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 746

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S R TEDI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 747  SVRKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQKEN-AFPIL 805

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 806  PSILQDIL 813


>XP_016511895.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tabacum]
          Length = 1020

 Score =  525 bits (1352), Expect(2) = e-176
 Identities = 269/468 (57%), Positives = 344/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 426  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 485

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF NG AVKGT L+NRK+    IQIR SMVKVE D  +   P+ NSLEVV IS +PR+T 
Sbjct: 486  LFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALPTFNSLEVVAISHRPRKTY 545

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV  + F+++L  ALE+ + ++  + AA++V++N+R++DDD   AR+I
Sbjct: 546  LSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLI 605

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 606  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 665

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGIFFSTKG RS ASEIANGD
Sbjct: 666  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGD 725

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTRMHS+PK   +KP+EF +D             K +
Sbjct: 726  FDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSK 785

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMDRLL L DD  +  + L  K+L+LIDIYYDALDAPK+GKKV +P+
Sbjct: 786  GASMSVAADSWLAFMDRLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPH 845

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 846  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 893



 Score =  124 bits (311), Expect(2) = e-176
 Identities = 62/128 (48%), Positives = 85/128 (66%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD  + LW ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 895  CFD-VEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 953

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S+R T+DI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 954  SARKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN-AFPIL 1012

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 1013 PSILQDIL 1020


>CDP03268.1 unnamed protein product [Coffea canephora]
          Length = 875

 Score =  531 bits (1367), Expect = e-176
 Identities = 279/460 (60%), Positives = 346/460 (75%), Gaps = 1/460 (0%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIELE-YKSSEGRVTDAHVREPPLLMQCRLFHNGF 177
            TGFISEDLA+KCP+   +AK+LKD + E+  Y  +E      H    PLLMQCRLF  G 
Sbjct: 292  TGFISEDLALKCPQNFCSAKFLKDNDFEVTCYAYNEEFECLDHPN--PLLMQCRLFSRGL 349

Query: 178  AVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTTLSRYLI 357
            AVKGTLL+NRK       IR SMVKV+ D R   AP+ +SLE+V +S KPRR  LS+ LI
Sbjct: 350  AVKGTLLVNRK-------IRSSMVKVKRDIRCPVAPTFDSLEIVAVSHKPRRCQLSKNLI 402

Query: 358  ALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMILSGVPL 537
            ALL++GGVP+  FLD+L   LE+ Q+LF+N HAA++VS+ + D+DD  TTARMIL+GVPL
Sbjct: 403  ALLSYGGVPRNFFLDILRTVLEETQALFTNLHAALKVSIRNGDMDDGWTTARMILAGVPL 462

Query: 538  DEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHENGPICGK 717
             EP +Q RL++LA  ERK L+ GKLPIS+SFY+MGTADPTGLL ++EV VI ENG I GK
Sbjct: 463  SEPHLQDRLAKLANFERKSLKEGKLPISESFYVMGTADPTGLLKANEVCVILENGQISGK 522

Query: 718  VLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGDFDGDMY 897
            VLVYRNPGLHFGD+H+L AVY+KELEDV+GNAK+GIFFSTKG+RSVA+EIANGDFDGDMY
Sbjct: 523  VLVYRNPGLHFGDVHVLEAVYVKELEDVIGNAKFGIFFSTKGQRSVANEIANGDFDGDMY 582

Query: 898  WVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQNISMGV 1077
            WVSRN QLL+ F+AS PWTR++SSP    +KPS+F ++             +KQ+ +M V
Sbjct: 583  WVSRNPQLLKYFRASEPWTRVYSSPPAENKKPSDFSAEALEYELFRLSLEKRKQSFNMAV 642

Query: 1078 AADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPNHLKADI 1257
            AA SWLAFMDRLL L D+ A + + L +++L L+DIYYDALDAPK+GKKV VP+ L A  
Sbjct: 643  AAHSWLAFMDRLLVLRDENAGDTDGLRQQILKLVDIYYDALDAPKSGKKVNVPSDLIAKS 702

Query: 1258 YPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            YPHYM +   YHSTS+LG I+D T   Q+E+ SI EI KL
Sbjct: 703  YPHYMGKGNSYHSTSILGDIFDQTEQFQSERRSIGEIWKL 742



 Score =  117 bits (293), Expect = 1e-23
 Identities = 65/133 (48%), Positives = 84/133 (63%), Gaps = 5/133 (3%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCN---DESKKSAADDVINKYKQILYDAAD 1547
            CF    IP+  L++W  RYD YR EM DAL  N   D+ K  AAD VI KYK++LY+AA+
Sbjct: 744  CFNS-RIPEEYLSMWMARYDDYRYEMRDALEQNPADDDLKNKAADRVIKKYKELLYEAAE 802

Query: 1548 FEGSSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVA--DRP 1721
             + S +  E+I  +ALA+YHV YD+A  R  +SKC+FAW+VAG ALC  H    +  + P
Sbjct: 803  LQESKKKMEEINNEALAIYHVSYDHAIGRGCISKCSFAWRVAGSALCNLHASNTSTNEYP 862

Query: 1722 MFLCDPSVLGKLL 1760
            M L  PSVL   L
Sbjct: 863  M-LVVPSVLRNAL 874


>XP_009780070.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris] XP_016454733.1 PREDICTED: probable
            RNA-dependent RNA polymerase 3 isoform X2 [Nicotiana
            tabacum]
          Length = 1021

 Score =  519 bits (1337), Expect(2) = e-175
 Identities = 269/468 (57%), Positives = 344/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 429  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 488

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            L+ NG AVKGT LINRK+    IQIR SMVKVE D  + + P+ NSLEVV I  +PR+T 
Sbjct: 489  LYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLPTFNSLEVVAI--RPRKTY 546

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV ++ F+++L  ALE+ + ++  + AA++V++N+R++DDD   ARMI
Sbjct: 547  LSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARMI 606

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 607  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 666

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGI FSTKG RS ASEIANGD
Sbjct: 667  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIVFSTKGPRSAASEIANGD 726

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTR HS+PK   +KP+EF +D             K +
Sbjct: 727  FDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFSADELEYELFRQFLRAKSK 786

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMDRLL L DD A+  + L  KML+LIDIYYDALDAPK+GKKV +P+
Sbjct: 787  GASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPH 846

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 847  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 894



 Score =  127 bits (319), Expect(2) = e-175
 Identities = 64/128 (50%), Positives = 85/128 (66%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD   TLW+ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 896  CFD-VEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 954

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S R TEDI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 955  SVRKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYQKEN-AFPIL 1013

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 1014 PSILQDIL 1021


>XP_009592436.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score =  522 bits (1345), Expect(2) = e-175
 Identities = 268/468 (57%), Positives = 343/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 426  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 485

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF NG AVKGT L+NRK+    IQIR SMVKVE D  +   P+ NSLEVV IS +PR+T 
Sbjct: 486  LFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALPTFNSLEVVAISHRPRKTY 545

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV  + F+++L  ALE+ + ++  + AA++V++N+R++DDD   AR+I
Sbjct: 546  LSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLI 605

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 606  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 665

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGIFFSTKG RS ASEIANGD
Sbjct: 666  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGD 725

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTRMHS+PK   +KP+EF +D             K +
Sbjct: 726  FDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSK 785

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMD LL L DD  +  + L  K+L+LIDIYYDALDAPK+GKKV +P+
Sbjct: 786  GASMSVAADSWLAFMDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPH 845

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 846  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 893



 Score =  123 bits (308), Expect(2) = e-175
 Identities = 62/128 (48%), Positives = 84/128 (65%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD  + LW ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 895  CFD-VEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 953

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S R T+DI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 954  SVRKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN-AFPIL 1012

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 1013 PSILQDIL 1020


>XP_016511902.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tabacum]
          Length = 1018

 Score =  519 bits (1336), Expect(2) = e-174
 Identities = 268/468 (57%), Positives = 343/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 426  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 485

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF NG AVKGT L+NRK+    IQIR SMVKVE D  +   P+ NSLEVV I  +PR+T 
Sbjct: 486  LFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALPTFNSLEVVAI--RPRKTY 543

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV  + F+++L  ALE+ + ++  + AA++V++N+R++DDD   AR+I
Sbjct: 544  LSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLI 603

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 604  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 663

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGIFFSTKG RS ASEIANGD
Sbjct: 664  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGD 723

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTRMHS+PK   +KP+EF +D             K +
Sbjct: 724  FDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSK 783

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMDRLL L DD  +  + L  K+L+LIDIYYDALDAPK+GKKV +P+
Sbjct: 784  GASMSVAADSWLAFMDRLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPH 843

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 844  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 891



 Score =  124 bits (311), Expect(2) = e-174
 Identities = 62/128 (48%), Positives = 85/128 (66%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD  + LW ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 893  CFD-VEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 951

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S+R T+DI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 952  SARKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN-AFPIL 1010

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 1011 PSILQDIL 1018


>XP_015163796.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
            [Solanum tuberosum]
          Length = 705

 Score =  520 bits (1339), Expect = e-174
 Identities = 268/465 (57%), Positives = 340/465 (73%), Gaps = 6/465 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN----IELEYKSSEGRVTDAHVREPPLLMQCRLFH 168
            TGFISEDLAM CP+    A+Y+KDEN    +++    +E R + +  REPPLLMQCRLF 
Sbjct: 216  TGFISEDLAMHCPKDFVKAEYIKDENYENFVDIVDLDAERRESVSWNREPPLLMQCRLFF 275

Query: 169  NGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTTLSR 348
            NG AVKGT L+NRK+    I IR SMVKVE D  + + P+ +SLE+V IS +P +  LS+
Sbjct: 276  NGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPAISSIPTFDSLEIVAISHRPNKAYLSK 335

Query: 349  YLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMILSG 528
             LI+LL++GGV K+ F++LL  ALE+ + ++  + AA++V +N+R++DDD  TARMI SG
Sbjct: 336  NLISLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYREMDDDCLTARMISSG 395

Query: 529  VPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHENGPI 708
            +PL+EP ++ RLSRLA  ER  L+GGKLPISDSFYLMGTADPTG+L S+EV VI +NG I
Sbjct: 396  IPLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNGQI 455

Query: 709  CGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGDFDG 888
             G+VLVYRNPGLHFGD+H++ A Y++EL DVVG+AKYGIFFSTKG RS A+EIANGDFDG
Sbjct: 456  SGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGDFDG 515

Query: 889  DMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQNIS 1068
            DMYWVS NR+++  +  S PW+RMHS+PK   +KPSEF +D             K +  +
Sbjct: 516  DMYWVSINRKVVDSYTTSRPWSRMHSTPKAVSKKPSEFSADKLEYELFRQFLEAKSKGAN 575

Query: 1069 MGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPNHLK 1248
            M VAADSWLAFMDRLL L DD  +E + L  KML+LIDIYYDALDAPK+GKKV +P+ LK
Sbjct: 576  MSVAADSWLAFMDRLLMLRDDNVDEMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLK 635

Query: 1249 ADIYPHYMDR--MKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            A+ +PHYM +     YHSTS+LG IYD       E   I EI KL
Sbjct: 636  ANKFPHYMAKGNSLSYHSTSILGQIYDYVDTYPDEDLCITEISKL 680


>XP_010322170.1 PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum] XP_010322171.1 PREDICTED: probable
            RNA-dependent RNA polymerase 3 [Solanum lycopersicum]
          Length = 1014

 Score =  520 bits (1340), Expect(2) = e-174
 Identities = 266/468 (56%), Positives = 343/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM CP+    A+Y+KDEN       ++L+  + E RV+ +  R+PPLLMQCR
Sbjct: 420  TGFISEDLAMHCPKDFSKAEYIKDENYENFVDIVDLDDVNVERRVSVSRNRKPPLLMQCR 479

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF NG AVKGT L+NRK+    I IR SMVKVE D  + + P+ +SLE+V IS +P +  
Sbjct: 480  LFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLEIVAISHRPNKAY 539

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS+ LI+LL++GGV K+ F++LL  ALE+ + ++  + AA++V++N+R++DD+  TARMI
Sbjct: 540  LSKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAALKVAINYREMDDECLTARMI 599

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SG+PL+EP +  RLSRLA  ER  L+GGKLPISDSFYLMGTADPTG+L S+EV VI +N
Sbjct: 600  SSGIPLNEPHLHARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDN 659

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL DVVG+AKYGIFFSTKG RS A+EIANGD
Sbjct: 660  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGD 719

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  +  S PW RMHS+P    +KPSEF +D             K +
Sbjct: 720  FDGDMYWVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEYELFRQFLEAKSK 779

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              +M +AADSWLAFMDRLLTL DD  ++ + L  KML+LIDIYYDALDAPK+GKKV +P+
Sbjct: 780  GANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPH 839

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            +LKA+ +PHYM++     YHSTS+LG IYD       E   I EI KL
Sbjct: 840  YLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKL 887



 Score =  121 bits (303), Expect(2) = e-174
 Identities = 61/130 (46%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CFE VEIP   +TLW+ RY+ Y+++M  A++ + E + ++ ++VI KYK +LY A +FE 
Sbjct: 889  CFE-VEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQ 947

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCL--KVADRPMFL 1730
            + R TEDI+ +ALA+YHV YD A     + KC FAWKVAG ALC+ H +  K  D P+  
Sbjct: 948  TVRKTEDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPIL- 1006

Query: 1731 CDPSVLGKLL 1760
              PSVL ++L
Sbjct: 1007 --PSVLQEIL 1014


>XP_009592437.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  516 bits (1329), Expect(2) = e-173
 Identities = 267/468 (57%), Positives = 342/468 (73%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM+CP+    A+Y+KDEN       ++LE   +E R   +  +EPPLLMQCR
Sbjct: 426  TGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAERRGNGSLNKEPPLLMQCR 485

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF NG AVKGT L+NRK+    IQIR SMVKVE D  +   P+ NSLEVV I  +PR+T 
Sbjct: 486  LFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALPTFNSLEVVAI--RPRKTY 543

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI+LL++GGV  + F+++L  ALE+ + ++  + AA++V++N+R++DDD   AR+I
Sbjct: 544  LSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALKVAINYREMDDDCLAARLI 603

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVPL+EP +  RLSRLA  ER  L+GGKLP+SDSFYLMGTADPTG+L ++EV VI ++
Sbjct: 604  SSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGTADPTGVLENNEVCVILDS 663

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL D+VG+AKYGIFFSTKG RS ASEIANGD
Sbjct: 664  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGIFFSTKGPRSAASEIANGD 723

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+L+  ++AS PWTRMHS+PK   +KP+EF +D             K +
Sbjct: 724  FDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFSADELEYELFRQFLGAKSK 783

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              SM VAADSWLAFMD LL L DD  +  + L  K+L+LIDIYYDALDAPK+GKKV +P+
Sbjct: 784  GASMSVAADSWLAFMDLLLMLRDDDVDGMHSLKGKILHLIDIYYDALDAPKSGKKVSIPH 843

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM+R     YHSTS+LG IYD       E   I EI KL
Sbjct: 844  DLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCITEISKL 891



 Score =  123 bits (308), Expect(2) = e-173
 Identities = 62/128 (48%), Positives = 84/128 (65%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VEIPD  + LW ERY+ Y+++M  A++   E K SA ++VI KYK++LY A +FE 
Sbjct: 893  CFD-VEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYGAPEFEQ 951

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S R T+DI+ +ALALYHV YD A     + KC FAWKVAG ALC+ H +   +   F   
Sbjct: 952  SVRKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYHKEN-AFPIL 1010

Query: 1737 PSVLGKLL 1760
            PS+L  +L
Sbjct: 1011 PSILQDIL 1018


>XP_018815684.1 PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Juglans regia]
          Length = 992

 Score =  490 bits (1262), Expect(2) = e-172
 Identities = 257/473 (54%), Positives = 333/473 (70%), Gaps = 14/473 (2%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIE-------LEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFIS+DLA+ CP   Y  + ++DENIE       L  K     ++++ +REPPLL+QCR
Sbjct: 393  TGFISDDLALLCPSNLYRGEQIRDENIERSPNLDVLAGKLLAMELSESSIREPPLLIQCR 452

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF+NG A+KGTLL+N+KLP  TIQ+R SM+KV+ D  L N  + NSLE+V  S+ P+R+ 
Sbjct: 453  LFNNGCAIKGTLLVNKKLPPRTIQVRPSMIKVDKDPNLSNIRTENSLEIVGTSNHPKRSF 512

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LSR LIALL++GG+PK+ F+D+L  AL DA   FSN+ AA+RVS+N+ ++DD    ARMI
Sbjct: 513  LSRNLIALLSYGGIPKEYFMDILINALRDAHGAFSNKRAALRVSINYGEMDD-FCVARMI 571

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
            LSG+PLDE  +QY LS L  EE+K L  GKL + + +YLMGTADPTG+L SDEV VI EN
Sbjct: 572  LSGIPLDESYLQYHLSILMKEEKKSLARGKLHVPECYYLMGTADPTGILESDEVCVILEN 631

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G I GKVLVYRNPGLHFGDIH+L A Y+K LE ++GNAKY IFF  KG RS+A E+A GD
Sbjct: 632  GQISGKVLVYRNPGLHFGDIHVLKATYVKALESLIGNAKYAIFFPCKGPRSLADEMARGD 691

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWT-----RMHSSPKVFQRKPSEFPSDXXXXXXXXXXX 1044
            FDGDMYWVSRN QLL  FK S PWT     +  S+  V  +KPS+F S+           
Sbjct: 692  FDGDMYWVSRNPQLLEYFKESEPWTPTLSMQHVSNHDVATKKPSDFSSEELEEELFKLFL 751

Query: 1045 NTKKQ-NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKT-G 1218
             T+ Q + +M  AADSWLA MDRLL LGD+C  E++ L   ++ LIDIYYDALDAPK  G
Sbjct: 752  TTRFQPSYAMSAAADSWLALMDRLLILGDECIEERDILKANIIQLIDIYYDALDAPKKGG 811

Query: 1219 KKVVVPNHLKADIYPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            +K+ VP  LKA+++PHYM++   + STS+LG IYD  +  Q +   ++++ KL
Sbjct: 812  RKIEVPKELKAELFPHYMEKGNSFTSTSILGSIYDAVMSYQAKCLPMKDVWKL 864



 Score =  146 bits (369), Expect(2) = e-172
 Identities = 71/129 (55%), Positives = 93/129 (72%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CFE VEIP+A L  WK+ YD YR+EM  +L+  +E K  AA++VI KYK+ILY AA++E 
Sbjct: 866  CFE-VEIPEACLDKWKKCYDQYRKEMTTSLNQGNEGKNEAAEEVIKKYKKILYAAAEYEE 924

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            + R  EDI+ +ALA+YH+ YDYA+ +   S C FAWKVAGPAL KFH +K  D   F+C 
Sbjct: 925  TKRRMEDIFNEALAIYHITYDYAKSKGSASYCGFAWKVAGPALAKFHAMK-QDEKSFICL 983

Query: 1737 PSVLGKLLN 1763
            PSVL ++LN
Sbjct: 984  PSVLREILN 992


>XP_006353487.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            tuberosum]
          Length = 1110

 Score =  497 bits (1280), Expect(2) = e-172
 Identities = 263/468 (56%), Positives = 324/468 (69%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYL------KDENIELEYKSSEGRVTDAHVREPPLLMQCRL 162
            TG+ISEDLA KCP+  +N K+           ++L   SSE    +    EPPLLMQCRL
Sbjct: 503  TGYISEDLARKCPQDFFNVKHRCANLERYTNGVKLGENSSELGEAEFQSGEPPLLMQCRL 562

Query: 163  FHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTTL 342
            F+NG AVKGTLL+NRKLP  TIQIR SM+KVEAD RL  A   NSLE+   S KPR T L
Sbjct: 563  FYNGLAVKGTLLVNRKLPRRTIQIRPSMIKVEADPRLSRAQMFNSLEINTPSLKPRNTYL 622

Query: 343  SRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMIL 522
            SR LIALL +GGVP + F D+L   LE+ Q L+S+E  A++V++NHRD DD ST   MI+
Sbjct: 623  SRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIM 682

Query: 523  SGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHENG 702
            +GVPL EP +   LS LA EER GL+GG+LPI+D+FYLMGTADPT  LN  EV VI E+G
Sbjct: 683  AGVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNPHEVCVILEHG 742

Query: 703  PICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGDF 882
             I G+VLVYRNPGLHFGDIH L AV +K L D+VGNAKYGIFFSTKG RS A+EIANGDF
Sbjct: 743  QIFGEVLVYRNPGLHFGDIHRLLAVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDF 802

Query: 883  DGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQN 1062
            DGD YWVS+N QLL+ F AS PW+R+HS+PK   R+P+ F ++            T+  N
Sbjct: 803  DGDKYWVSQNPQLLKYFTASRPWSRIHSTPKTLHREPNNFSAEEREHDLFQTFLETRMPN 862

Query: 1063 ISMGVAADSWLAFMDRLLTLGDDCANEKNEL---TKKMLNLIDIYYDALDAPKTGKKVVV 1233
             SM  A+ +W A MDRLL LG +   E  E+    +K+  LID+YYDA+DAPK+G KV +
Sbjct: 863  YSMADASANWYALMDRLLILGKNNTTENEEIKSVKEKLFELIDLYYDAIDAPKSGNKVYI 922

Query: 1234 PNHLKADIYPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            P  LK D +PH++ + + YHSTSVLG IYD     + E+ +  EIKKL
Sbjct: 923  PKRLKVDKFPHFLQKKESYHSTSVLGEIYDRVEKFKAEEPAAVEIKKL 970



 Score =  137 bits (345), Expect(2) = e-172
 Identities = 71/128 (55%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
 Frame = +3

Query: 1389 VEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEGSSRN 1568
            V IPD  L LW+ERY  YR EM +AL+ + ESK   AD VI KYKQ+LY+A D E S R+
Sbjct: 975  VGIPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRS 1034

Query: 1569 TEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHC---LKVADRPMFLCDP 1739
            T D+Y DALA+Y V YDYA+   DV KC FAWKVAG ALCK H     K  ++ +    P
Sbjct: 1035 TTDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVMAMSP 1094

Query: 1740 SVLGKLLN 1763
            S+L KLLN
Sbjct: 1095 SILHKLLN 1102


>XP_015077971.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            3 [Solanum pennellii]
          Length = 1018

 Score =  513 bits (1322), Expect(2) = e-171
 Identities = 263/468 (56%), Positives = 340/468 (72%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN-------IELEYKSSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLAM CP+    A+Y+KDEN       ++L+  + E R + +  REPPLLMQCR
Sbjct: 424  TGFISEDLAMHCPKDFSKAEYIKDENYENFVDIVDLDDVNVERRASVSRNREPPLLMQCR 483

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF NG AVKGT L+NRK+    I IR SMVKVE D  + + P+ +SLE+V IS +P +  
Sbjct: 484  LFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISSIPTFDSLEIVAISHRPNKAY 543

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS+ LI+LL++GGV K+ F++LL  ALE+ + +   + AA++V++N+R++DD+  TARMI
Sbjct: 544  LSKNLISLLSYGGVHKEYFMELLGSALEETKQVRLRKRAALKVAINYREMDDECLTARMI 603

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SG+PL+EP +  RLSRLA  ER  L+GGKLPI+DSFYLMGTADPTG+L S+EV VI +N
Sbjct: 604  SSGIPLNEPHLHARLSRLAKIERTKLRGGKLPINDSFYLMGTADPTGVLESNEVCVILDN 663

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + G+VLVYRNPGLHFGD+H++ A Y++EL DVVG+AKYGIFFSTKG R  A+EIANGD
Sbjct: 664  GQVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRXAATEIANGD 723

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS NR+++  +  S PW RMHS+PK   +KPSEF +D             K +
Sbjct: 724  FDGDMYWVSINRKVVDSYTTSRPWIRMHSTPKAVSKKPSEFSADELEYELFRQFLEAKSK 783

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
              +M +AADSWLAFMDRLL L DD  ++ + L  KML+LIDIYYDALDAPK+GKKV +P+
Sbjct: 784  GANMSLAADSWLAFMDRLLMLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPH 843

Query: 1240 HLKADIYPHYMDRMK--EYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            +LKA+ +PHYM++     YHSTS+LG IYD       E   I EI KL
Sbjct: 844  YLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKL 891



 Score =  120 bits (301), Expect(2) = e-171
 Identities = 60/130 (46%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CFE VEIP   +TLW+ RY+ Y+++M  A++ + E + ++ ++VI KYK +LY A +FE 
Sbjct: 893  CFE-VEIPQRCMTLWRGRYEEYKKDMTRAMNLDCELRITSCNEVIKKYKMLLYGAVEFEQ 951

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCL--KVADRPMFL 1730
            + R TEDI+ +ALA+YHV YD A     + KC FAWKVAG ALC+ H +  K  D P+  
Sbjct: 952  TVRKTEDIFDEALAIYHVTYDNARIAYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPIL- 1010

Query: 1731 CDPSVLGKLL 1760
              PS+L ++L
Sbjct: 1011 --PSLLQEIL 1018


>XP_006338861.1 PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Solanum tuberosum]
          Length = 911

 Score =  520 bits (1339), Expect = e-171
 Identities = 268/465 (57%), Positives = 340/465 (73%), Gaps = 6/465 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDEN----IELEYKSSEGRVTDAHVREPPLLMQCRLFH 168
            TGFISEDLAM CP+    A+Y+KDEN    +++    +E R + +  REPPLLMQCRLF 
Sbjct: 422  TGFISEDLAMHCPKDFVKAEYIKDENYENFVDIVDLDAERRESVSWNREPPLLMQCRLFF 481

Query: 169  NGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTTLSR 348
            NG AVKGT L+NRK+    I IR SMVKVE D  + + P+ +SLE+V IS +P +  LS+
Sbjct: 482  NGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPAISSIPTFDSLEIVAISHRPNKAYLSK 541

Query: 349  YLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMILSG 528
             LI+LL++GGV K+ F++LL  ALE+ + ++  + AA++V +N+R++DDD  TARMI SG
Sbjct: 542  NLISLLSYGGVQKEYFMELLGSALEETKQVYLRKRAALKVVINYREMDDDCLTARMISSG 601

Query: 529  VPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHENGPI 708
            +PL+EP ++ RLSRLA  ER  L+GGKLPISDSFYLMGTADPTG+L S+EV VI +NG I
Sbjct: 602  IPLNEPHLRARLSRLAKIERTKLRGGKLPISDSFYLMGTADPTGVLESNEVCVILDNGQI 661

Query: 709  CGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGDFDG 888
             G+VLVYRNPGLHFGD+H++ A Y++EL DVVG+AKYGIFFSTKG RS A+EIANGDFDG
Sbjct: 662  SGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKYGIFFSTKGPRSAATEIANGDFDG 721

Query: 889  DMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQNIS 1068
            DMYWVS NR+++  +  S PW+RMHS+PK   +KPSEF +D             K +  +
Sbjct: 722  DMYWVSINRKVVDSYTTSRPWSRMHSTPKAVSKKPSEFSADKLEYELFRQFLEAKSKGAN 781

Query: 1069 MGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPNHLK 1248
            M VAADSWLAFMDRLL L DD  +E + L  KML+LIDIYYDALDAPK+GKKV +P+ LK
Sbjct: 782  MSVAADSWLAFMDRLLMLRDDNVDEMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHDLK 841

Query: 1249 ADIYPHYMDR--MKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            A+ +PHYM +     YHSTS+LG IYD       E   I EI KL
Sbjct: 842  ANKFPHYMAKGNSLSYHSTSILGQIYDYVDTYPDEDLCITEISKL 886


>XP_019190390.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Ipomoea nil]
          Length = 1026

 Score =  492 bits (1266), Expect(2) = e-171
 Identities = 256/467 (54%), Positives = 337/467 (72%), Gaps = 8/467 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIE-------LEYKSSEGRVTDAHVREPPLLMQCR 159
            TG+ISEDLA+KCP+G   AK+++D N E       LE  ++EG +   +   PPLLMQ R
Sbjct: 429  TGYISEDLALKCPKGFCRAKFIRDGNFEQFRDLTELEDTNNEG-IQYWNRELPPLLMQFR 487

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            +F+NG A+KGTLLIN+++  G IQIR SMVKVE D ++    + NSLE+V IS KPRR  
Sbjct: 488  MFNNGRAIKGTLLINKQIGPGKIQIRPSMVKVEKDPKILVTSTFNSLEIVAISHKPRRAN 547

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS++LI LL +GGVP++ F  L+  A E+ +++++++ AA+R ++ H ++D++ TTA++I
Sbjct: 548  LSKFLILLLTYGGVPEEYFFALMKSAWEEIKTIYTDKRAALRAAVRHGEIDNEFTTAKLI 607

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
             SGVP+DEP +Q  LSRL+  E+  L+ GKLP SDS+YLMGT DPTG LNSDEV VI +N
Sbjct: 608  SSGVPMDEPYLQGCLSRLSNMEKDNLKTGKLPTSDSYYLMGTVDPTGTLNSDEVCVILDN 667

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + GKVLVY++PGLHFGDIHI+NA Y++EL  +VGNAKYGIFFSTKG  S ASEIAN D
Sbjct: 668  GHVTGKVLVYKHPGLHFGDIHIMNAKYVEELNHIVGNAKYGIFFSTKGPISAASEIANSD 727

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVS N QLL  +KAS PW+R+H+ PK   ++PS+F  D             KK 
Sbjct: 728  FDGDMYWVSMNPQLLSYYKASEPWSRIHAVPKAVTKRPSDFMPDELEYELLRVFLEGKKS 787

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEK-NELTKKMLNLIDIYYDALDAPKTGKKVVVP 1236
              +M VAAD WLA MD+ LTLG++CA EK  +L +K+L+LID+YY+ALDAPKTGK V +P
Sbjct: 788  GNNMAVAADYWLACMDQFLTLGNNCAKEKPADLKRKILHLIDLYYEALDAPKTGKTVNIP 847

Query: 1237 NHLKADIYPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
              L  + YPHYM+R   Y STSVLG +YD    S  E++S +EI KL
Sbjct: 848  RTLMPEKYPHYMERRPSYQSTSVLGKLYDYKEPSIAEENSQKEIWKL 894



 Score =  140 bits (352), Expect(2) = e-171
 Identities = 69/132 (52%), Positives = 93/132 (70%), Gaps = 4/132 (3%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDT-YRQEMVDALSCN---DESKKSAADDVINKYKQILYDAA 1544
            CFE VE+P+  L+LWKERY   Y  EM +A++C     E++K AA++V+ KYKQ+LY+A 
Sbjct: 896  CFE-VEVPETCLSLWKERYRKGYLPEMSEAMNCGTPKSEARKVAANNVMKKYKQLLYEAG 954

Query: 1545 DFEGSSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPM 1724
            DFE S R  +DI+ +ALA+YHVCYDYA+   DV KC FAW+VAG ALCK+H  K    P+
Sbjct: 955  DFEESRRKDDDIFNEALAIYHVCYDYAKMSNDVRKCGFAWRVAGSALCKYHAFKQKGSPI 1014

Query: 1725 FLCDPSVLGKLL 1760
             +  PS+L  +L
Sbjct: 1015 LIL-PSILQDIL 1025


>XP_015059191.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            pennellii]
          Length = 1054

 Score =  494 bits (1272), Expect(2) = e-170
 Identities = 265/469 (56%), Positives = 325/469 (69%), Gaps = 10/469 (2%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIE-------LEYKSSEGRVTDAHVREPPLLMQCR 159
            TG+ISEDLA KCP+  +N K+ K  N+E       L   SSE    +    EPPLLMQCR
Sbjct: 447  TGYISEDLARKCPQDFFNVKH-KCANLERYTNGVKLGENSSELGEAEFQSGEPPLLMQCR 505

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF+NG AVKGTLL+N+KLP  TIQIR SM+KVEAD RL  A   NSLE+   S KPR T 
Sbjct: 506  LFYNGLAVKGTLLVNKKLPRRTIQIRPSMIKVEADPRLSRAQMFNSLEINTPSLKPRNTY 565

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LSR LIALL +GGVP + F D+L   LE+ Q L+S+E  A++V++NHRD DD ST   MI
Sbjct: 566  LSRTLIALLTYGGVPVEYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMI 625

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
            ++GVPL EP +   LS LA EER GL+GG+LPI+D+FYLMGTADPT  LN  EV VI E+
Sbjct: 626  MAGVPLTEPYLWCCLSSLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNPHEVCVILEH 685

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G I G+VLVYRNPGLHFGDIH L AV +K L D+VGNAKYGIFFSTKG RS A+EIANGD
Sbjct: 686  GQIFGEVLVYRNPGLHFGDIHKLLAVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGD 745

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGD YWVS+N QLL+ F AS PW+R+HS+PK   R+P+ F ++            T+  
Sbjct: 746  FDGDKYWVSQNPQLLKYFTASRPWSRIHSTPKALHREPNNFSAEEREHELFQTFLETRMP 805

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNE---LTKKMLNLIDIYYDALDAPKTGKKVV 1230
            N SM  A+ +W A MDRLL LG +   E  E   + +K+  LID+YYDA+DAPK+G KV 
Sbjct: 806  NYSMADASANWYALMDRLLILGKNNTIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVY 865

Query: 1231 VPNHLKADIYPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
            +P  LK D +PH++ + + YHSTSVLG IYD     + E+    EIKKL
Sbjct: 866  IPKRLKVDKFPHFLQKKESYHSTSVLGEIYDRVEKFKAEEPVAVEIKKL 914



 Score =  134 bits (338), Expect(2) = e-170
 Identities = 69/128 (53%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
 Frame = +3

Query: 1389 VEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEGSSRN 1568
            V IP+  L LW+ERY  YR EM +AL+ + ESK   AD VI KYKQ+LY+A D E S R+
Sbjct: 919  VGIPETCLRLWEERYRKYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRS 978

Query: 1569 TEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHC---LKVADRPMFLCDP 1739
            T DIY DALA+Y V YDYA+   DV KC FAWKVAG ALC+ H     K  ++ +    P
Sbjct: 979  TTDIYNDALAIYRVTYDYAKAIGDVRKCGFAWKVAGAALCRLHAELHAKEHNQKVMAMSP 1038

Query: 1740 SVLGKLLN 1763
            S+L  LLN
Sbjct: 1039 SILHNLLN 1046


>XP_011093632.1 PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1013

 Score =  496 bits (1277), Expect(2) = e-170
 Identities = 256/468 (54%), Positives = 332/468 (70%), Gaps = 9/468 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKD-------ENIELEYKSSEGRVTDAHVREPPLLMQCR 159
            TG+ISEDLAMKCP+    AKY+ D       E ++++  S + R+  +  +E PLLMQCR
Sbjct: 415  TGYISEDLAMKCPKEFSAAKYITDNSFETYHEFVDIDDASCQTRLAKSRNKEAPLLMQCR 474

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF+NG AVKGTLL+N+KL  G IQIR SM+KVE D       + NSLE+V IS KP RT 
Sbjct: 475  LFYNGCAVKGTLLVNKKLKLGEIQIRPSMIKVERDCTAPVQGNFNSLEIVAISHKPGRTF 534

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS+ LI+LLN+GGVP+Q FL+LLT ALED Q ++SN HAA+RV+ NH  LD       MI
Sbjct: 535  LSKTLISLLNYGGVPQQVFLELLTNALEDTQKVYSNRHAALRVASNHDGLDFGYLAQLMI 594

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
              G+PL+EP + + L  L  +ER  L+ GK+P+ +SFYLMGTADPTG+L  D+V V+ +N
Sbjct: 595  SCGIPLNEPYLNHCLCNLKKDERAKLRKGKVPVGESFYLMGTADPTGVLEYDQVCVVLDN 654

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G I GKVLVYRNPGLHFGDIH++ A+Y+++LED +G++KYGIFFSTKG RS   E+A GD
Sbjct: 655  GQISGKVLVYRNPGLHFGDIHVMEAIYVQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGD 714

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVSR+ +LL++FKAS PW R++S+ +   + P E  S+             +K 
Sbjct: 715  FDGDMYWVSRHHELLKNFKASEPWARVYSTKESNSKNPKELSSEELERELFRLFLQARKP 774

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
            +  M  AADSWLAFMDRLLTLGDD   EK+ L +KM++LIDIYYDALDAPK+GK+V +P 
Sbjct: 775  SFEMSTAADSWLAFMDRLLTLGDDRTFEKDCLREKMIHLIDIYYDALDAPKSGKRVNLPK 834

Query: 1240 HLKADIYPHYMDRMKE--YHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             L+ ++YPH+M+R  E  YHS S+LG IYDM    + E    +EI KL
Sbjct: 835  ELRPEMYPHHMERGPEYSYHSMSILGRIYDMIEEFKDEVVPKKEIWKL 882



 Score =  132 bits (332), Expect(2) = e-170
 Identities = 66/132 (50%), Positives = 91/132 (68%), Gaps = 3/132 (2%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ + IP+  +  W+  Y+ YR+EM  AL+ N ESKK AA+DVI K K+ LYDA D E 
Sbjct: 884  CFD-IPIPETYIQKWRINYENYRREMAKALNSNYESKKDAANDVIKKNKEFLYDAPDMEE 942

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVA---DRPMF 1727
            SS++T  IYK+ALA+YHV YDYA+   D+ KC+FAWKV G ALC  +  K A   ++P+ 
Sbjct: 943  SSKDTTVIYKEALAIYHVTYDYAKSMDDIGKCSFAWKVGGSALCNLYAWKTAGPKEKPLT 1002

Query: 1728 LCDPSVLGKLLN 1763
            +  PSV+ ++LN
Sbjct: 1003 IL-PSVIREVLN 1013


>CDP03267.1 unnamed protein product [Coffea canephora]
          Length = 1019

 Score =  506 bits (1303), Expect(2) = e-170
 Identities = 262/466 (56%), Positives = 338/466 (72%), Gaps = 7/466 (1%)
 Frame = +1

Query: 1    TGFISEDLAMKCPRGCYNAKYLKDENIELEYK-------SSEGRVTDAHVREPPLLMQCR 159
            TGFISEDLA+KCP+    A+Y+KD++ +  +          + R T+A  R+PPLLMQCR
Sbjct: 429  TGFISEDLALKCPQDFGRAQYIKDKDFQKFHNFVGFVDAPFDVRGTEARNRDPPLLMQCR 488

Query: 160  LFHNGFAVKGTLLINRKLPCGTIQIRRSMVKVEADSRLGNAPSLNSLEVVKISDKPRRTT 339
            LF  G AVKGTLL+N+KL  GTIQIR SM+KV+ D       + +SLE+V +S +PRR  
Sbjct: 489  LFSQGLAVKGTLLVNKKLKAGTIQIRPSMIKVQKDREGPIGQTFDSLEIVAVSHRPRRCH 548

Query: 340  LSRYLIALLNFGGVPKQTFLDLLTIALEDAQSLFSNEHAAVRVSLNHRDLDDDSTTARMI 519
            LS+YLIALL++GGVP+  F+DL+T  LE+  ++F+++ AA +V+L+     D     R++
Sbjct: 549  LSKYLIALLSYGGVPRTFFVDLMTSVLEETNAVFTDKRAAFKVALHQEGFYDAGGALRLL 608

Query: 520  LSGVPLDEPCVQYRLSRLATEERKGLQGGKLPISDSFYLMGTADPTGLLNSDEVFVIHEN 699
            L+G+PL+EP +Q RLS LA  ER  L+ GK+PIS+SFYLMGTADPTGLL  +EV V+ +N
Sbjct: 609  LAGIPLNEPHLQKRLSELANNERTLLKEGKIPISESFYLMGTADPTGLLKENEVCVVLDN 668

Query: 700  GPICGKVLVYRNPGLHFGDIHILNAVYLKELEDVVGNAKYGIFFSTKGKRSVASEIANGD 879
            G + GKVL+YRNPGLHFGD+H+L AVY+  LED++GNAKYGIFFSTKG+RSVASEIANGD
Sbjct: 669  GQVSGKVLLYRNPGLHFGDVHVLEAVYVPALEDIIGNAKYGIFFSTKGRRSVASEIANGD 728

Query: 880  FDGDMYWVSRNRQLLRDFKASIPWTRMHSSPKVFQRKPSEFPSDXXXXXXXXXXXNTKKQ 1059
            FDGDMYWVSRN QLL+ F AS PWTR++ S +  ++ P+E+ ++             KK 
Sbjct: 729  FDGDMYWVSRNPQLLKYFSASPPWTRVYPSLRAERKNPNEYSAEQLEHELFRHF--LKKP 786

Query: 1060 NISMGVAADSWLAFMDRLLTLGDDCANEKNELTKKMLNLIDIYYDALDAPKTGKKVVVPN 1239
            + +M VAADSWLAFMDRLL LGDD A EK+ L + ML LIDIYYDALDAPK G KV+VP 
Sbjct: 787  SYNMAVAADSWLAFMDRLLILGDDNAKEKDALKENMLKLIDIYYDALDAPKRGTKVIVPE 846

Query: 1240 HLKADIYPHYMDRMKEYHSTSVLGLIYDMTLLSQTEKSSIEEIKKL 1377
             LKA+ +PHYM +   Y STSVLG IYD     Q+E+  I  I+KL
Sbjct: 847  ELKAERFPHYMGKDGSYRSTSVLGDIYDRAEAFQSEQRCI-AIEKL 891



 Score =  122 bits (305), Expect(2) = e-170
 Identities = 62/129 (48%), Positives = 86/129 (66%)
 Frame = +3

Query: 1377 CFEHVEIPDALLTLWKERYDTYRQEMVDALSCNDESKKSAADDVINKYKQILYDAADFEG 1556
            CF+ VE+P   L+ W+ RY+ YR+EM  AL  +DES+  AADDVI KYK++LY+AA+FE 
Sbjct: 893  CFD-VEVPQNYLSSWRGRYNEYRKEMNVALQKDDESRNDAADDVIKKYKRLLYEAAEFEE 951

Query: 1557 SSRNTEDIYKDALALYHVCYDYAERRRDVSKCNFAWKVAGPALCKFHCLKVADRPMFLCD 1736
            S ++ ++I+K+ALALY V YDYA   +D  KC FAWK AG AL  +      +R +    
Sbjct: 952  SKKDVQEIHKEALALYQVTYDYAISTKDAGKCGFAWKAAGSALLSYFATGRNER-LVPVS 1010

Query: 1737 PSVLGKLLN 1763
            PS L +L +
Sbjct: 1011 PSALRELFS 1019