BLASTX nr result
ID: Panax24_contig00013524
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00013524
(1720 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDP22016.1 unnamed protein product [Coffea canephora] 65 4e-16
AHN13810.1 reverse transcriptase [Aristotelia chilensis virus 1] 69 2e-10
CDP21136.1 unnamed protein product [Coffea canephora] 66 6e-10
XP_012436815.1 PREDICTED: uncharacterized protein LOC105763228 [... 67 1e-09
XP_006408598.1 hypothetical protein EUTSA_v10002258mg, partial [... 63 5e-09
CDP19118.1 unnamed protein product [Coffea canephora] 60 9e-09
CDP20958.1 unnamed protein product [Coffea canephora] 68 3e-08
CDP20417.1 unnamed protein product [Coffea canephora] 61 3e-08
KJB06691.1 hypothetical protein B456_001G159600 [Gossypium raimo... 64 5e-08
XP_006405940.1 hypothetical protein EUTSA_v10028344mg [Eutrema s... 57 2e-07
KJB76373.1 hypothetical protein B456_012G084900 [Gossypium raimo... 61 3e-07
XP_006393720.1 hypothetical protein EUTSA_v10012231mg, partial [... 60 4e-07
CDP19016.1 unnamed protein product [Coffea canephora] 63 6e-07
OMO64225.1 hypothetical protein COLO4_32096 [Corchorus olitorius] 58 7e-07
Q6XKE6.1 RecName: Full=Genome polyprotein; Contains: RecName: Fu... 55 1e-06
NP_127504.1 ORF I polyprotein [Petunia vein clearing virus] Q91D... 55 1e-06
AAO67369.1 polyprotein 1, partial [Petunia vein clearing virus] 55 1e-06
XP_006398168.1 hypothetical protein EUTSA_v10001178mg, partial [... 60 3e-06
CDP17145.1 unnamed protein product [Coffea canephora] 61 6e-06
KYP45527.1 polyprotein [Cajanus cajan] 60 8e-06
>CDP22016.1 unnamed protein product [Coffea canephora]
Length = 537
Score = 65.5 bits (158), Expect(3) = 4e-16
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
SFP+ML FKQ+T+PN QLLRW+ +FS+YSFD++HIKG
Sbjct: 174 SFPKMLHFKQKTIPNPQLLRWSAWFSQYSFDVRHIKG 210
Score = 40.4 bits (93), Expect(3) = 4e-16
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Frame = -1
Query: 1531 PKPPQCSFIPI--IYMMDXXXXXXXXXXXXXXFIDKQHARAMLFKYQSLCIQ*YGFRFLE 1358
P P Q P+ +M +K++ + +Y+ YG L
Sbjct: 224 PLPQQAEITPVSLCFMFSPISSEPPDIYEIPYPWEKENIERIRNQYELEIFSSYGGSILN 283
Query: 1357 CLFVHPKYPFLGVMIIPFGLYLDPEMLSFLWYFICL---HTIAVQFPVNLVLSKIRTNEL 1187
+P+YPF + I + P LWYF CL + I ++F + N
Sbjct: 284 PFGTNPEYPFCQIFIARHDDFPKP----LLWYFWCLCHQYHILMEFQSPFFNQPLNPN-- 337
Query: 1186 QEFTEFKLFVEWFNPLT*W 1130
++F++WF PLT W
Sbjct: 338 -----LQVFLQWFRPLTFW 351
Score = 28.9 bits (63), Expect(3) = 4e-16
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI +HFLVEMDM +FP
Sbjct: 161 LISSHFLVEMDMGSFP 176
>AHN13810.1 reverse transcriptase [Aristotelia chilensis virus 1]
Length = 758
Score = 69.3 bits (168), Expect(2) = 2e-10
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKGTTHHSIPNM 1543
+SFPRML FKQ+T+PNSQLLRWA +FSR+ F +KHIKG ++++P+M
Sbjct: 364 SSFPRMLHFKQKTIPNSQLLRWAXWFSRFDFQVKHIKG-KNNTLPDM 409
Score = 26.2 bits (56), Expect(2) = 2e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI +HF +EMDM +FP
Sbjct: 352 LIGHHFQIEMDMSSFP 367
Score = 65.5 bits (158), Expect = 2e-07
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 26/145 (17%)
Frame = -1
Query: 1423 ARAMLFKYQSLCIQ*YGFRFLECLFV---HPKYPFLGVMIIPFGLYLDPEMLSFLWYFIC 1253
A+ ++FKYQS+CI+ G FL V HP YPF+ + L +L FLWY +
Sbjct: 461 AKDLMFKYQSICIRESGPYFLGSSGVSGLHPDYPFIQTFVFLPDFILTKPILCFLWYLLS 520
Query: 1252 LHTIAVQFPVNLVLSKI-----------------RTNELQEFTEFKLFVEWFNPLT*W-- 1130
+HTI Q PV L KI + + + + K F+EWF+PL W
Sbjct: 521 VHTITFQIPVTTFLYKIDQIFASKGIFHPQYTITQPDLDNQLSFMKTFLEWFHPLHWWKH 580
Query: 1129 ----IRMVHKEIRDYETTN*DVYVI 1067
I+M ++ +N ++Y I
Sbjct: 581 QFLYIKMNQSQLYKESASN-EIYAI 604
>CDP21136.1 unnamed protein product [Coffea canephora]
Length = 419
Score = 65.9 bits (159), Expect(2) = 6e-10
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
SFP+ML FKQ+T+P+ QLLRWA +FS+YSFD+KHIKG
Sbjct: 132 SFPKMLHFKQKTIPHPQLLRWAAWFSQYSFDVKHIKG 168
Score = 28.1 bits (61), Expect(2) = 6e-10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI HFL+EMDM +FP
Sbjct: 119 LISQHFLIEMDMGSFP 134
>XP_012436815.1 PREDICTED: uncharacterized protein LOC105763228 [Gossypium raimondii]
Length = 985
Score = 67.0 bits (162), Expect(2) = 1e-09
Identities = 28/38 (73%), Positives = 36/38 (94%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
+SFP+ML+FKQ+ +PNSQLLRWAE+FSR+SFD+ HIKG
Sbjct: 652 SSFPKMLKFKQKEVPNSQLLRWAEWFSRFSFDVIHIKG 689
Score = 26.2 bits (56), Expect(2) = 1e-09
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 1706 HFLVEMDMPAFP 1671
HFLVEMDM +FP
Sbjct: 644 HFLVEMDMSSFP 655
>XP_006408598.1 hypothetical protein EUTSA_v10002258mg, partial [Eutrema salsugineum]
ESQ50051.1 hypothetical protein EUTSA_v10002258mg,
partial [Eutrema salsugineum]
Length = 260
Score = 63.2 bits (152), Expect(2) = 5e-09
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
+SFP+M+QFKQ+ LP +QLLRWA +FS++ FD+KHIKG
Sbjct: 62 SSFPKMIQFKQKILPQAQLLRWASWFSQWKFDVKHIKG 99
Score = 27.7 bits (60), Expect(2) = 5e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
L+ HFL+EMDM +FP
Sbjct: 50 LVGQHFLIEMDMSSFP 65
>CDP19118.1 unnamed protein product [Coffea canephora]
Length = 368
Score = 60.5 bits (145), Expect(2) = 9e-09
Identities = 25/37 (67%), Positives = 32/37 (86%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
SFP+ML FKQ +PN QLLRW+ +FS+YSFD+K+IKG
Sbjct: 273 SFPKMLNFKQNLVPNPQLLRWSAWFSQYSFDVKNIKG 309
Score = 29.6 bits (65), Expect(2) = 9e-09
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFPGCYN 1659
LI +HFLVEMDM +FP N
Sbjct: 260 LISHHFLVEMDMGSFPKMLN 279
>CDP20958.1 unnamed protein product [Coffea canephora]
Length = 513
Score = 67.8 bits (164), Expect = 3e-08
Identities = 28/40 (70%), Positives = 36/40 (90%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKGTTH 1561
SFP+ML FKQ+T+P+ QLLRWA +FS+YSFD+KHIKG T+
Sbjct: 248 SFPKMLHFKQKTIPHPQLLRWAAWFSQYSFDVKHIKGKTN 287
>CDP20417.1 unnamed protein product [Coffea canephora]
Length = 312
Score = 60.8 bits (146), Expect(2) = 3e-08
Identities = 25/37 (67%), Positives = 33/37 (89%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
SFP+MLQFKQ+ +PN QLLRW+ +F +YSFD+K+IKG
Sbjct: 61 SFPKMLQFKQKIVPNPQLLRWSVWFPQYSFDVKNIKG 97
Score = 27.3 bits (59), Expect(2) = 3e-08
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI +HFLVE+DM +FP
Sbjct: 48 LISHHFLVEIDMGSFP 63
>KJB06691.1 hypothetical protein B456_001G159600 [Gossypium raimondii]
Length = 206
Score = 63.9 bits (154), Expect = 5e-08
Identities = 26/41 (63%), Positives = 37/41 (90%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKGTTH 1561
+SF +ML+FKQ+ +P+ QLLRW+E+FS+YSFD+KHIKG T+
Sbjct: 4 SSFLKMLKFKQKEIPHPQLLRWSEWFSKYSFDVKHIKGKTN 44
>XP_006405940.1 hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
ESQ47393.1 hypothetical protein EUTSA_v10028344mg
[Eutrema salsugineum]
Length = 1508
Score = 57.4 bits (137), Expect(2) = 2e-07
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKH 1579
+SFP+M+QFKQ+ LP +QLLRWA +FS++ FD+KH
Sbjct: 1164 SSFPKMIQFKQKILPQAQLLRWASWFSQWKFDVKH 1198
Score = 27.7 bits (60), Expect(2) = 2e-07
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
L+ HFL+EMDM +FP
Sbjct: 1152 LVGQHFLIEMDMSSFP 1167
>KJB76373.1 hypothetical protein B456_012G084900 [Gossypium raimondii]
Length = 267
Score = 61.2 bits (147), Expect(2) = 3e-07
Identities = 24/41 (58%), Positives = 36/41 (87%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKGTTH 1561
+SFP+M++FKQ+ +P+ QLLRWA++F RY FD+KHI+G T+
Sbjct: 78 SSFPKMVKFKQKQVPHPQLLRWAKWFFRYHFDVKHIQGKTN 118
Score = 23.9 bits (50), Expect(2) = 3e-07
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
L+ FLVEMDM +FP
Sbjct: 66 LVGYDFLVEMDMSSFP 81
>XP_006393720.1 hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
ESQ31006.1 hypothetical protein EUTSA_v10012231mg,
partial [Eutrema salsugineum]
Length = 1904
Score = 60.1 bits (144), Expect(2) = 4e-07
Identities = 24/38 (63%), Positives = 33/38 (86%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
+SF +M+QFKQ+ LP +QLLRWA +FS++ FD+KHIKG
Sbjct: 1604 SSFSKMIQFKQKILPQAQLLRWASWFSQWKFDVKHIKG 1641
Score = 24.3 bits (51), Expect(2) = 4e-07
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAF 1674
++ HFL+EMDM +F
Sbjct: 1592 IVGQHFLIEMDMSSF 1606
>CDP19016.1 unnamed protein product [Coffea canephora]
Length = 347
Score = 62.8 bits (151), Expect = 6e-07
Identities = 25/37 (67%), Positives = 34/37 (91%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
SFP+ML FKQ+++P+ QLLRW+ +FS+YSFD+KHIKG
Sbjct: 198 SFPKMLHFKQKSVPHPQLLRWSAWFSQYSFDVKHIKG 234
>OMO64225.1 hypothetical protein COLO4_32096 [Corchorus olitorius]
Length = 333
Score = 58.2 bits (139), Expect(2) = 7e-07
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = -2
Query: 1683 ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKGTTHHSIPNM 1543
A+F +ML K++T+PN QLLRW+++F RYSF +HIKG H+ IP+M
Sbjct: 37 AAFDQMLDVKKKTVPNPQLLRWSQWFIRYSFTTRHIKG-KHNLIPDM 82
Score = 25.4 bits (54), Expect(2) = 7e-07
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAF 1674
LI +HF+VE+DM AF
Sbjct: 25 LIGHHFIVELDMAAF 39
>Q6XKE6.1 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT AAO67368.1 polyprotein 1 [Petunia
vein clearing virus]
Length = 2180
Score = 55.1 bits (131), Expect(2) = 1e-06
Identities = 20/37 (54%), Positives = 31/37 (83%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
+FP+M++ + +PNSQLLRWA++FS Y F++KH+KG
Sbjct: 1758 AFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKG 1794
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI +FLVEMDM AFP
Sbjct: 1745 LIHTNFLVEMDMRAFP 1760
>NP_127504.1 ORF I polyprotein [Petunia vein clearing virus] Q91DM0.1 RecName:
Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT AAK68664.1 ORF I polyprotein
[Petunia vein clearing virus]
Length = 2179
Score = 55.1 bits (131), Expect(2) = 1e-06
Identities = 20/37 (54%), Positives = 31/37 (83%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
+FP+M++ + +PNSQLLRWA++FS Y F++KH+KG
Sbjct: 1757 AFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKG 1793
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI +FLVEMDM AFP
Sbjct: 1744 LIHTNFLVEMDMRAFP 1759
>AAO67369.1 polyprotein 1, partial [Petunia vein clearing virus]
Length = 1886
Score = 55.1 bits (131), Expect(2) = 1e-06
Identities = 20/37 (54%), Positives = 31/37 (83%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
+FP+M++ + +PNSQLLRWA++FS Y F++KH+KG
Sbjct: 1758 AFPKMIRLNPKIVPNSQLLRWAQWFSPYQFEVKHLKG 1794
Score = 27.3 bits (59), Expect(2) = 1e-06
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3
Query: 1718 LIRNHFLVEMDMPAFP 1671
LI +FLVEMDM AFP
Sbjct: 1745 LIHTNFLVEMDMRAFP 1760
>XP_006398168.1 hypothetical protein EUTSA_v10001178mg, partial [Eutrema salsugineum]
ESQ39621.1 hypothetical protein EUTSA_v10001178mg,
partial [Eutrema salsugineum]
Length = 278
Score = 60.1 bits (144), Expect = 3e-06
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = -1
Query: 1429 QHARAMLFKYQSLCIQ*YGFR--FLECLFVHPKYPFLGVMIIPFGLYLDPEMLSFLWYFI 1256
+H + +FKYQS+ + YG F+ + +HP +PF + I + E+L FLWY
Sbjct: 157 EHLQHRIFKYQSIILSKYGINCHFIAPMGIHPDHPFAHLYRIE-NTAIPEEVLCFLWYLC 215
Query: 1255 CLHTIAVQFPVNLVLSKIRTNELQEFTE-FKLFVEWFNPLT*WIRMVHKEIR 1103
++TI + F + + + N +Q + F F+ WF PL W R + K +
Sbjct: 216 SVYTIGITFDIQWLYQYV--NAVQNRRDCFSTFLAWFAPLIIWSRKLRKSAK 265
>CDP17145.1 unnamed protein product [Coffea canephora]
Length = 1112
Score = 60.8 bits (146), Expect = 6e-06
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = -2
Query: 1680 SFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
SFP+ML FKQ+++P+ QLLRW+ +FS+YSFD+KHI G
Sbjct: 854 SFPKMLHFKQKSIPHPQLLRWSAWFSQYSFDVKHIMG 890
>KYP45527.1 polyprotein [Cajanus cajan]
Length = 463
Score = 59.7 bits (143), Expect = 8e-06
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Frame = -2
Query: 1704 FSCGNGH--------ASFPRMLQFKQRTLPNSQLLRWAEYFSRYSFDIKHIKG 1570
F+ G GH ++FPRML+FK R PN+Q+LR E+FSRY F +KHIKG
Sbjct: 319 FASGKGHQFEIQLDNSAFPRMLEFKNRVPPNAQILRLKEWFSRYDFTVKHIKG 371