BLASTX nr result
ID: Panax24_contig00013231
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00013231
(349 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CBI30994.3 unnamed protein product, partial [Vitis vinifera] 68 5e-11
KYP39096.1 Cleavage and polyadenylation specificity factor CPSF3... 68 5e-11
XP_002281594.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 68 5e-11
XP_018828092.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 68 5e-11
KHN14347.1 Cleavage and polyadenylation specificity factor CPSF3... 68 7e-11
XP_003534764.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 68 7e-11
XP_003546247.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 68 7e-11
XP_017971687.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 68 7e-11
EOX96971.1 Cleavage and polyadenylation specificity factor 30 [T... 68 7e-11
XP_017229957.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 67 1e-10
KVH87501.1 YTH domain-containing protein [Cynara cardunculus var... 67 1e-10
XP_016197709.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 67 1e-10
XP_015959242.1 PREDICTED: LOW QUALITY PROTEIN: 30-kDa cleavage a... 67 1e-10
KOM53180.1 hypothetical protein LR48_Vigan09g183900 [Vigna angul... 66 3e-10
XP_019440105.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 66 3e-10
XP_017436429.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 66 3e-10
XP_014518648.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 66 3e-10
XP_015865601.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 65 5e-10
XP_007147504.1 hypothetical protein PHAVU_006G130200g [Phaseolus... 65 5e-10
XP_015882698.1 PREDICTED: 30-kDa cleavage and polyadenylation sp... 65 5e-10
>CBI30994.3 unnamed protein product, partial [Vitis vinifera]
Length = 485
Score = 68.2 bits (165), Expect = 5e-11
Identities = 43/111 (38%), Positives = 44/111 (39%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM ISL G NPDNG ENPDIVP
Sbjct: 310 YLEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFG 369
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSY 333
Q A Q +MWPPHMPLA ADGFSY
Sbjct: 370 QALGPAAQGRGRGRGIMWPPHMPLA--RGARPIPSMRGFPPVMMGADGFSY 418
>KYP39096.1 Cleavage and polyadenylation specificity factor CPSF30 [Cajanus
cajan]
Length = 648
Score = 68.2 bits (165), Expect = 5e-11
Identities = 42/114 (36%), Positives = 44/114 (38%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDNG ENPDIVP
Sbjct: 371 YLEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 430
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 431 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 481
>XP_002281594.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Vitis vinifera]
Length = 673
Score = 68.2 bits (165), Expect = 5e-11
Identities = 43/111 (38%), Positives = 44/111 (39%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM ISL G NPDNG ENPDIVP
Sbjct: 383 YLEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFG 442
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSY 333
Q A Q +MWPPHMPLA ADGFSY
Sbjct: 443 QALGPAAQGRGRGRGIMWPPHMPLA--RGARPIPSMRGFPPVMMGADGFSY 491
>XP_018828092.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Juglans regia]
Length = 704
Score = 68.2 bits (165), Expect = 5e-11
Identities = 44/115 (38%), Positives = 47/115 (40%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELMEISL G +PDN ENPDIVP
Sbjct: 395 YLEPDSELMEISLAAESKREEEKAKGVDPDNRGENPDIVPFEDNEEEEEEESEEEEESFS 454
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPLT 345
Q A Q +MWPPHMPLA ADG SYGP+T
Sbjct: 455 QIPGAAMQGRGRGRGIMWPPHMPLA--RGARPMPGTQGFPPVIMGADGLSYGPIT 507
>KHN14347.1 Cleavage and polyadenylation specificity factor CPSF30 [Glycine
soja]
Length = 608
Score = 67.8 bits (164), Expect = 7e-11
Identities = 42/114 (36%), Positives = 44/114 (38%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDNG ENPDIVP
Sbjct: 312 YLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFS 371
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 372 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 422
>XP_003534764.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like isoform X1 [Glycine max] KRH36762.1 hypothetical
protein GLYMA_09G022200 [Glycine max]
Length = 681
Score = 67.8 bits (164), Expect = 7e-11
Identities = 42/114 (36%), Positives = 44/114 (38%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDNG ENPDIVP
Sbjct: 395 YLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 454
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 455 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 505
>XP_003546247.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Glycine max] KRH11760.1 hypothetical protein
GLYMA_15G128500 [Glycine max]
Length = 691
Score = 67.8 bits (164), Expect = 7e-11
Identities = 42/114 (36%), Positives = 44/114 (38%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDNG ENPDIVP
Sbjct: 395 YLEPDSELMAISVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFS 454
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 455 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 505
>XP_017971687.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Theobroma cacao] XP_007041140.2 PREDICTED: 30-kDa
cleavage and polyadenylation specificity factor 30
[Theobroma cacao]
Length = 698
Score = 67.8 bits (164), Expect = 7e-11
Identities = 43/115 (37%), Positives = 47/115 (40%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G N DNG ENPDIVP
Sbjct: 395 YLEPDSELMAISVAAELKREEEKAKGVNSDNGGENPDIVP----FEDNEEEEEEESEEED 450
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPLT 345
+ F A Q +MWPPHMPLA DGFSYGP+T
Sbjct: 451 ESFSAAAQGRGRGRGVMWPPHMPLA--RGARPMPGMRGFPPMMMGGDGFSYGPVT 503
>EOX96971.1 Cleavage and polyadenylation specificity factor 30 [Theobroma
cacao]
Length = 698
Score = 67.8 bits (164), Expect = 7e-11
Identities = 43/115 (37%), Positives = 47/115 (40%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G N DNG ENPDIVP
Sbjct: 395 YLEPDSELMAISVAAELKREEEKAKGVNSDNGGENPDIVP----FEDNEEEEEEESEEED 450
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPLT 345
+ F A Q +MWPPHMPLA DGFSYGP+T
Sbjct: 451 ESFSAAAQGRGRGRGVMWPPHMPLA--RGARPMPGMRGFPPMMMGGDGFSYGPVT 503
>XP_017229957.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Daucus carota subsp. sativus] KZN11206.1
hypothetical protein DCAR_003862 [Daucus carota subsp.
sativus]
Length = 689
Score = 67.4 bits (163), Expect = 1e-10
Identities = 42/113 (37%), Positives = 46/113 (40%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELMEISL G NP++G EN DIVP
Sbjct: 388 YLEPDSELMEISLAAESKREEEKAKGVNPEDGTENQDIVPFEDNEEEEEEESDEEDQSFS 447
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGP 339
QGFP+ Q MMW P+MPLA DGF YGP
Sbjct: 448 QGFPMMGQGRGRGRGMMWAPNMPLA--RGGRPMPGMRGFPPIMTGPDGFPYGP 498
>KVH87501.1 YTH domain-containing protein [Cynara cardunculus var. scolymus]
Length = 685
Score = 67.0 bits (162), Expect = 1e-10
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM ISL G NP+N +ENPDIVP
Sbjct: 387 YLEPDSELMAISLAAESKREEEKAKGVNPENASENPDIVPFEDNEEEEEEESEEDEDSFE 446
Query: 181 QGFPVATQ-XXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYG 336
QGF +A Q M+WPPHMP+ DGFS+G
Sbjct: 447 QGFGLAAQGRGRGSRGMIWPPHMPMGRGPRPMPGMRGFPPLMNMMGGDGFSFG 499
>XP_016197709.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Arachis ipaensis]
Length = 696
Score = 67.0 bits (162), Expect = 1e-10
Identities = 42/114 (36%), Positives = 44/114 (38%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDNG ENPDIVP
Sbjct: 399 YLEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 458
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
A Q MMWPPHMPLA DG SYGP+
Sbjct: 459 HVVGPAVQGRGRGRGMMWPPHMPLA---RGARPMPGMPGFNPVMMGDGLSYGPV 509
>XP_015959242.1 PREDICTED: LOW QUALITY PROTEIN: 30-kDa cleavage and polyadenylation
specificity factor 30 [Arachis duranensis]
Length = 700
Score = 67.0 bits (162), Expect = 1e-10
Identities = 42/114 (36%), Positives = 44/114 (38%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDNG ENPDIVP
Sbjct: 403 YLEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 462
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
A Q MMWPPHMPLA DG SYGP+
Sbjct: 463 HVVGPAVQGRGRGRGMMWPPHMPLA---RGARPMPGMPGFNPVMMGDGLSYGPV 513
>KOM53180.1 hypothetical protein LR48_Vigan09g183900 [Vigna angularis]
Length = 380
Score = 65.9 bits (159), Expect = 3e-10
Identities = 40/114 (35%), Positives = 43/114 (37%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPD ELM +S+ G NPDNG ENPDIVP
Sbjct: 77 YLEPDGELMAVSVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 136
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 137 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 187
>XP_019440105.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like isoform X1 [Lupinus angustifolius]
XP_019440106.1 PREDICTED: 30-kDa cleavage and
polyadenylation specificity factor 30-like isoform X2
[Lupinus angustifolius] OIW13907.1 hypothetical protein
TanjilG_31796 [Lupinus angustifolius]
Length = 680
Score = 65.9 bits (159), Expect = 3e-10
Identities = 35/84 (41%), Positives = 38/84 (45%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM +S+ G NPDNG ENPDIVP
Sbjct: 397 YLEPDSELMAMSIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 456
Query: 181 QGFPVATQXXXXXXXMMWPPHMPL 252
QG +Q MMWPPHMPL
Sbjct: 457 QGVGPPSQGRGRGRGMMWPPHMPL 480
>XP_017436429.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 isoform X1 [Vigna angularis] XP_017436430.1
PREDICTED: 30-kDa cleavage and polyadenylation
specificity factor 30 isoform X2 [Vigna angularis]
BAT87667.1 hypothetical protein VIGAN_05105800 [Vigna
angularis var. angularis]
Length = 696
Score = 65.9 bits (159), Expect = 3e-10
Identities = 40/114 (35%), Positives = 43/114 (37%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPD ELM +S+ G NPDNG ENPDIVP
Sbjct: 393 YLEPDGELMAVSVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 452
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 453 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 503
>XP_014518648.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Vigna radiata var. radiata]
Length = 696
Score = 65.9 bits (159), Expect = 3e-10
Identities = 40/114 (35%), Positives = 43/114 (37%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPD ELM +S+ G NPDNG ENPDIVP
Sbjct: 393 YLEPDGELMAVSVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFG 452
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 453 HGVGPAGQGRGRGRGMMWPPHMPLG---RGARPMPGMQGFNPVMMGDGLSYGPV 503
>XP_015865601.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30-like [Ziziphus jujuba]
Length = 696
Score = 65.5 bits (158), Expect = 5e-10
Identities = 42/115 (36%), Positives = 45/115 (39%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDN ENPDIVP
Sbjct: 388 YLEPDSELMAISIAAESKREEEKAKGVNPDNSGENPDIVPFEDNEEEEEEESEDEEESLS 447
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPLT 345
Q A Q +MWPPHMPLA ADG YGP+T
Sbjct: 448 QVPGAANQGRGRGRGVMWPPHMPLA--RGARPMPGMQGFPPVMMGADGSPYGPVT 500
>XP_007147504.1 hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
ESW19498.1 hypothetical protein PHAVU_006G130200g
[Phaseolus vulgaris]
Length = 697
Score = 65.5 bits (158), Expect = 5e-10
Identities = 40/114 (35%), Positives = 43/114 (37%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPD ELM +S+ G NPDNG ENPDIVP
Sbjct: 394 YLEPDGELMAVSVAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEDESFG 453
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPL 342
G A Q MMWPPHMPL DG SYGP+
Sbjct: 454 HGVGPAGQGRGRGRGMMWPPHMPL---PRGARPMPGMQGFNPVMMGDGLSYGPV 504
>XP_015882698.1 PREDICTED: 30-kDa cleavage and polyadenylation specificity factor
30 [Ziziphus jujuba]
Length = 702
Score = 65.5 bits (158), Expect = 5e-10
Identities = 42/115 (36%), Positives = 45/115 (39%)
Frame = +1
Query: 1 YLEPDSELMEISLXXXXXXXXXXXXGFNPDNGAENPDIVPXXXXXXXXXXXXXXXXXXXX 180
YLEPDSELM IS+ G NPDN ENPDIVP
Sbjct: 394 YLEPDSELMAISIAAESKREEEKAKGVNPDNSGENPDIVPFEDNEEEEEEESEDEEESLS 453
Query: 181 QGFPVATQXXXXXXXMMWPPHMPLAXXXXXXXXXXXXXXXXXXXXADGFSYGPLT 345
Q A Q +MWPPHMPLA ADG YGP+T
Sbjct: 454 QVPGAANQGRGRGRGVMWPPHMPLA--RGARPMPGMQGFPPVMMGADGSPYGPVT 506