BLASTX nr result

ID: Panax24_contig00013025 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00013025
         (668 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAV77603.1 zf-RING_2 domain-containing protein/zf-RING_3 domain-...    57   3e-06
XP_010108122.1 E3 ubiquitin-protein ligase [Morus notabilis] EXC...    55   4e-06

>GAV77603.1 zf-RING_2 domain-containing protein/zf-RING_3 domain-containing
           protein [Cephalotus follicularis]
          Length = 221

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/98 (33%), Positives = 47/98 (47%)
 Frame = -3

Query: 318 ARELMPFLIQTPEILAQTKPKLSVHFRHFEKIRSPVKIEVFDGELELCMCSICGSRVLTE 139
           +R L P L +T   L Q  P     F+        +   + D E  + +C+IC  + L +
Sbjct: 69  SRPLQPHLTETSG-LNQDTPSSIPSFK--------ITSSLLDQEDPVILCAICKEQFLLD 119

Query: 138 TVVAKLPCLHLFHRDCIYQSLPNFNSCPLCGLACATFI 25
            +V +LPC HL+H DCI   L   NSCPLC     T +
Sbjct: 120 AIVKRLPCNHLYHSDCITPWLHLHNSCPLCRSKIPTLV 157


>XP_010108122.1 E3 ubiquitin-protein ligase [Morus notabilis] EXC17854.1 E3
           ubiquitin-protein ligase [Morus notabilis]
          Length = 129

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = -3

Query: 195 DGELELCMCSICGSRVLTETVVAKLPCLHLFHRDCIYQSLPNFNSCPLC 49
           D E +L  C IC   V+  + + ++PC H FH DCI Q L   NSCPLC
Sbjct: 63  DDESKLMTCGICTEEVMIGSQLIRMPCSHQFHEDCILQWLNKANSCPLC 111


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