BLASTX nr result

ID: Panax24_contig00012710 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00012710
         (604 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN06646.1 hypothetical protein DCAR_007483 [Daucus carota subsp...    80   1e-14
XP_017231858.1 PREDICTED: uncharacterized protein LOC108206161 i...    80   2e-14
XP_017231859.1 PREDICTED: uncharacterized protein LOC108206161 i...    77   3e-13
XP_017218175.1 PREDICTED: uncharacterized protein LOC108195712 [...    57   5e-06

>KZN06646.1 hypothetical protein DCAR_007483 [Daucus carota subsp. sativus]
          Length = 301

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 58/166 (34%), Positives = 85/166 (51%)
 Frame = +2

Query: 107 QVTAFPQTYEKRKNIQNAEESSIPELSFLQSPGDVPHRQRSKRRVIHKKATTVDSGFSGD 286
           +VTA P      K+++ AE+S+I  L    S  D+P R+R+KR    K A  ++S  +G 
Sbjct: 37  KVTASPLEPSMMKSLERAEKSNIQGLPAFCSAKDIPRRKRTKRGDGVKNA--INSERTGL 94

Query: 287 QIVQEHPGSMLSTARARPRAHQKRKSKKVAEDSSGSKGCALRKRKIKKFAEDSSDSEKTL 466
           +++      + ST   RP                       +KRK K+    S+DSE+T+
Sbjct: 95  EVL------IPSTECRRP----------------------CQKRKCKEVPAQSTDSEQTV 126

Query: 467 PCSFRCRGQTKRSVKNNDTRQQGKLDDNMLDKYLGNLWWSFPSDKK 604
           PC  R RGQT+R    N T  QGKL+ ++L+ YLGN+W S P  KK
Sbjct: 127 PCFTRIRGQTRRRGTGNGT-DQGKLNSSLLNNYLGNMWQSIPRGKK 171


>XP_017231858.1 PREDICTED: uncharacterized protein LOC108206161 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 378

 Score = 80.5 bits (197), Expect = 2e-14
 Identities = 58/166 (34%), Positives = 85/166 (51%)
 Frame = +2

Query: 107 QVTAFPQTYEKRKNIQNAEESSIPELSFLQSPGDVPHRQRSKRRVIHKKATTVDSGFSGD 286
           +VTA P      K+++ AE+S+I  L    S  D+P R+R+KR    K A  ++S  +G 
Sbjct: 46  KVTASPLEPSMMKSLERAEKSNIQGLPAFCSAKDIPRRKRTKRGDGVKNA--INSERTGL 103

Query: 287 QIVQEHPGSMLSTARARPRAHQKRKSKKVAEDSSGSKGCALRKRKIKKFAEDSSDSEKTL 466
           +++      + ST   RP                       +KRK K+    S+DSE+T+
Sbjct: 104 EVL------IPSTECRRP----------------------CQKRKCKEVPAQSTDSEQTV 135

Query: 467 PCSFRCRGQTKRSVKNNDTRQQGKLDDNMLDKYLGNLWWSFPSDKK 604
           PC  R RGQT+R    N T  QGKL+ ++L+ YLGN+W S P  KK
Sbjct: 136 PCFTRIRGQTRRRGTGNGT-DQGKLNSSLLNNYLGNMWQSIPRGKK 180


>XP_017231859.1 PREDICTED: uncharacterized protein LOC108206161 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 366

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 56/166 (33%), Positives = 79/166 (47%)
 Frame = +2

Query: 107 QVTAFPQTYEKRKNIQNAEESSIPELSFLQSPGDVPHRQRSKRRVIHKKATTVDSGFSGD 286
           +VTA P      K+++ AE+S+I  L    S  D+P R+R+KR               GD
Sbjct: 46  KVTASPLEPSMMKSLERAEKSNIQGLPAFCSAKDIPRRKRTKR---------------GD 90

Query: 287 QIVQEHPGSMLSTARARPRAHQKRKSKKVAEDSSGSKGCALRKRKIKKFAEDSSDSEKTL 466
            +                         K A +S   + C  +KRK K+    S+DSE+T+
Sbjct: 91  GV-------------------------KNAINSECRRPC--QKRKCKEVPAQSTDSEQTV 123

Query: 467 PCSFRCRGQTKRSVKNNDTRQQGKLDDNMLDKYLGNLWWSFPSDKK 604
           PC  R RGQT+R    N T  QGKL+ ++L+ YLGN+W S P  KK
Sbjct: 124 PCFTRIRGQTRRRGTGNGT-DQGKLNSSLLNNYLGNMWQSIPRGKK 168


>XP_017218175.1 PREDICTED: uncharacterized protein LOC108195712 [Daucus carota
           subsp. sativus]
          Length = 411

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
 Frame = +2

Query: 335 RPRAHQKRKSKKVAEDSSGSKGCALRKRKIKKFAE---DSSDSEKTLPCSFRCRGQTKRS 505
           +P+  ++R +   A +S+  +    R+RK +K      D S++E+T     R   Q++R 
Sbjct: 125 QPKQSKRRINPVKASNSACKQSQHPRQRKNRKRVAADLDDSEAEQTRASVSRAHRQSRRR 184

Query: 506 VKNNDTRQQGKLDDNMLDKYLGNLWWSFPSDKK 604
           V+N   RQ+G LDD +L+KYLG+LW + P +KK
Sbjct: 185 VRN--ARQKGMLDDKLLNKYLGDLWQTIPREKK 215


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