BLASTX nr result
ID: Panax24_contig00012650
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00012650
(463 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_018810369.1 PREDICTED: DNA topoisomerase 1 [Juglans regia] 121 1e-32
XP_019704058.1 PREDICTED: DNA topoisomerase 1 beta-like isoform ... 119 7e-32
AQK50785.1 DNA topoisomerase 1 beta [Zea mays] 117 2e-31
XP_019704057.1 PREDICTED: DNA topoisomerase 1 beta-like isoform ... 119 3e-31
XP_008360314.1 PREDICTED: DNA topoisomerase 1-like [Malus domest... 115 2e-30
AAL87337.2 putative DNA topoisomerase I, partial [Arabidopsis th... 118 3e-30
KDO62157.1 hypothetical protein CISIN_1g0022602mg, partial [Citr... 121 4e-30
XP_010657185.1 PREDICTED: DNA topoisomerase 1 isoform X3 [Vitis ... 118 5e-30
NP_001119063.1 DNA binding / DNA topoisomerase type I [Arabidops... 112 5e-30
XP_012434359.1 PREDICTED: DNA topoisomerase 1-like isoform X2 [G... 121 9e-30
XP_011093631.1 PREDICTED: DNA topoisomerase 1-like [Sesamum indi... 122 1e-29
BAK32960.1 topoisomerase I [Ophiorrhiza pseudofasciculata] 121 4e-29
CDP13767.1 unnamed protein product [Coffea canephora] 121 4e-29
BAG31375.1 topoisomerase I [Ophiorrhiza japonica] 121 4e-29
XP_008245865.1 PREDICTED: DNA topoisomerase 1-like, partial [Pru... 121 5e-29
EOY12191.1 DNA topoisomerase I alpha isoform 3 [Theobroma cacao]... 121 5e-29
OAY28419.1 hypothetical protein MANES_15G065000 [Manihot esculenta] 121 5e-29
XP_008449103.1 PREDICTED: DNA topoisomerase 1-like [Cucumis melo... 121 5e-29
XP_004149585.1 PREDICTED: DNA topoisomerase 1-like [Cucumis sati... 121 5e-29
XP_018812330.1 PREDICTED: DNA topoisomerase 1-like [Juglans regia] 121 5e-29
>XP_018810369.1 PREDICTED: DNA topoisomerase 1 [Juglans regia]
Length = 123
Score = 121 bits (303), Expect = 1e-32
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 66 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 123
>XP_019704058.1 PREDICTED: DNA topoisomerase 1 beta-like isoform X3 [Elaeis
guineensis]
Length = 125
Score = 119 bits (298), Expect = 7e-32
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = +3
Query: 6 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF WAMDVDPSFRF
Sbjct: 69 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPSFRF 125
>AQK50785.1 DNA topoisomerase 1 beta [Zea mays]
Length = 111
Score = 117 bits (294), Expect = 2e-31
Identities = 55/57 (96%), Positives = 55/57 (96%)
Frame = +3
Query: 6 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF WAMDVDP FRF
Sbjct: 55 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFVWAMDVDPEFRF 111
>XP_019704057.1 PREDICTED: DNA topoisomerase 1 beta-like isoform X2 [Elaeis
guineensis]
Length = 177
Score = 119 bits (298), Expect = 3e-31
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = +3
Query: 6 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF WAMDVDPSFRF
Sbjct: 121 KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPSFRF 177
>XP_008360314.1 PREDICTED: DNA topoisomerase 1-like [Malus domestica]
Length = 125
Score = 115 bits (289), Expect = 2e-30
Identities = 54/58 (93%), Positives = 56/58 (96%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF+WAM V+P FRF
Sbjct: 68 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFSWAMPVEPDFRF 125
>AAL87337.2 putative DNA topoisomerase I, partial [Arabidopsis thaliana]
Length = 232
Score = 118 bits (296), Expect = 3e-30
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKED+KTVALGTSKINY+DPRITVAWCKRH+VPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 169 TKEDMKTVALGTSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFAWAMDVDPEFRF 226
>KDO62157.1 hypothetical protein CISIN_1g0022602mg, partial [Citrus sinensis]
Length = 363
Score = 121 bits (303), Expect = 4e-30
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 306 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPEFRF 363
>XP_010657185.1 PREDICTED: DNA topoisomerase 1 isoform X3 [Vitis vinifera]
Length = 242
Score = 118 bits (295), Expect = 5e-30
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRI+VAWCKR EVPIEKIFNKSLLAKFAWAMDVDPSFRF
Sbjct: 185 TKEDLKTVALGTSKINYLDPRISVAWCKRQEVPIEKIFNKSLLAKFAWAMDVDPSFRF 242
>NP_001119063.1 DNA binding / DNA topoisomerase type I [Arabidopsis thaliana]
AEE85242.1 DNA binding / DNA topoisomerase type I
[Arabidopsis thaliana] OAO98053.1 hypothetical protein
AXX17_AT4G30850 [Arabidopsis thaliana]
Length = 69
Score = 112 bits (281), Expect = 5e-30
Identities = 52/58 (89%), Positives = 54/58 (93%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINY+DPRITVAWCKRHE PIEKIFNKSLL KFAWAMDV+P F F
Sbjct: 12 TKEDLKTVALGTSKINYMDPRITVAWCKRHEAPIEKIFNKSLLEKFAWAMDVEPHFTF 69
>XP_012434359.1 PREDICTED: DNA topoisomerase 1-like isoform X2 [Gossypium
raimondii]
Length = 425
Score = 121 bits (303), Expect = 9e-30
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 368 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 425
>XP_011093631.1 PREDICTED: DNA topoisomerase 1-like [Sesamum indicum]
Length = 893
Score = 122 bits (307), Expect = 1e-29
Identities = 58/58 (100%), Positives = 58/58 (100%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF
Sbjct: 836 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 893
>BAK32960.1 topoisomerase I [Ophiorrhiza pseudofasciculata]
Length = 925
Score = 121 bits (304), Expect = 4e-29
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+MDVDPSFRF
Sbjct: 868 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 925
>CDP13767.1 unnamed protein product [Coffea canephora]
Length = 926
Score = 121 bits (304), Expect = 4e-29
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+MDVDPSFRF
Sbjct: 869 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 926
>BAG31375.1 topoisomerase I [Ophiorrhiza japonica]
Length = 927
Score = 121 bits (304), Expect = 4e-29
Identities = 57/58 (98%), Positives = 58/58 (100%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+MDVDPSFRF
Sbjct: 870 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPSFRF 927
>XP_008245865.1 PREDICTED: DNA topoisomerase 1-like, partial [Prunus mume]
Length = 724
Score = 121 bits (303), Expect = 5e-29
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 667 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 724
>EOY12191.1 DNA topoisomerase I alpha isoform 3 [Theobroma cacao] EOY12193.1
DNA topoisomerase I alpha isoform 3 [Theobroma cacao]
Length = 836
Score = 121 bits (303), Expect = 5e-29
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 779 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 836
>OAY28419.1 hypothetical protein MANES_15G065000 [Manihot esculenta]
Length = 877
Score = 121 bits (303), Expect = 5e-29
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 820 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPQFRF 877
>XP_008449103.1 PREDICTED: DNA topoisomerase 1-like [Cucumis melo] XP_008449104.1
PREDICTED: DNA topoisomerase 1-like [Cucumis melo]
Length = 889
Score = 121 bits (303), Expect = 5e-29
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 832 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
>XP_004149585.1 PREDICTED: DNA topoisomerase 1-like [Cucumis sativus] XP_011650506.1
PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
KGN56068.1 hypothetical protein Csa_3G063680 [Cucumis
sativus]
Length = 889
Score = 121 bits (303), Expect = 5e-29
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 832 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
>XP_018812330.1 PREDICTED: DNA topoisomerase 1-like [Juglans regia]
Length = 896
Score = 121 bits (303), Expect = 5e-29
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = +3
Query: 3 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPSFRF 176
TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDP FRF
Sbjct: 839 TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 896