BLASTX nr result
ID: Panax24_contig00012625
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00012625
(404 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006428009.1 hypothetical protein CICLE_v10026735mg [Citrus cl... 145 2e-42
ABQ32301.1 putative 15.9 kDa subunit of RNA polymerase II [Artem... 145 3e-42
XP_011090278.1 PREDICTED: DNA-directed RNA polymerase II subunit... 145 3e-42
XP_011088997.1 PREDICTED: DNA-directed RNA polymerase II subunit... 145 3e-42
XP_006428010.1 hypothetical protein CICLE_v10026735mg [Citrus cl... 145 3e-42
OMO55927.1 RNA polymerase II, Rpb4 [Corchorus capsularis] 144 7e-42
XP_012487157.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 7e-42
XP_017982148.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 7e-42
XP_017648160.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 7e-42
XP_018818161.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 1e-41
OAY44344.1 hypothetical protein MANES_08G141900 [Manihot esculen... 144 1e-41
XP_002282413.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 1e-41
XP_012089384.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 1e-41
XP_002307132.1 hypothetical protein POPTR_0005s08690g [Populus t... 144 1e-41
OAY44345.1 hypothetical protein MANES_08G141900 [Manihot esculenta] 144 2e-41
KDP23744.1 hypothetical protein JCGZ_23577 [Jatropha curcas] 144 2e-41
XP_016678477.1 PREDICTED: DNA-directed RNA polymerase II subunit... 144 2e-41
OAY42008.1 hypothetical protein MANES_09G146500 [Manihot esculen... 142 3e-41
KZV58512.1 hypothetical protein F511_23765 [Dorcoceras hygrometr... 142 3e-41
XP_017244290.1 PREDICTED: DNA-directed RNA polymerase II subunit... 142 4e-41
>XP_006428009.1 hypothetical protein CICLE_v10026735mg [Citrus clementina]
ESR41249.1 hypothetical protein CICLE_v10026735mg
[Citrus clementina]
Length = 114
Score = 145 bits (365), Expect = 2e-42
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI++RGR HDD+A
Sbjct: 40 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEA 99
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 100 IEKMLNDLSLIKKFE 114
>ABQ32301.1 putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
Length = 138
Score = 145 bits (365), Expect = 3e-42
Identities = 69/75 (92%), Positives = 75/75 (100%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVRE+LSR+QLAEFELCVLGNLCPETVEEA+AMVPSI+SRGRGHDD+A
Sbjct: 64 RFSRYKNPDAVRQVRELLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLND+SLIKKFE
Sbjct: 124 IEKMLNDMSLIKKFE 138
>XP_011090278.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Sesamum
indicum]
Length = 138
Score = 145 bits (365), Expect = 3e-42
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI++RGR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>XP_011088997.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum] XP_011088998.1 PREDICTED: DNA-directed RNA
polymerase II subunit 4 [Sesamum indicum]
Length = 138
Score = 145 bits (365), Expect = 3e-42
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI++RGR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>XP_006428010.1 hypothetical protein CICLE_v10026735mg [Citrus clementina]
XP_006494738.1 PREDICTED: DNA-directed RNA polymerase II
subunit 4 isoform X2 [Citrus sinensis] ESR41250.1
hypothetical protein CICLE_v10026735mg [Citrus
clementina]
Length = 138
Score = 145 bits (365), Expect = 3e-42
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI++RGR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>OMO55927.1 RNA polymerase II, Rpb4 [Corchorus capsularis]
Length = 138
Score = 144 bits (363), Expect = 7e-42
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDDDA
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDA 123
Query: 224 IEKMLNDLSLIKKFE 180
IE+MLNDLSLIKKFE
Sbjct: 124 IERMLNDLSLIKKFE 138
>XP_012487157.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] XP_012457051.1 PREDICTED: DNA-directed RNA
polymerase II subunit 4 [Gossypium raimondii]
XP_017608639.1 PREDICTED: DNA-directed RNA polymerase II
subunit 4 [Gossypium arboreum] KJB38133.1 hypothetical
protein B456_006G238100 [Gossypium raimondii] KJB71268.1
hypothetical protein B456_011G113800 [Gossypium
raimondii] KJB71269.1 hypothetical protein
B456_011G113800 [Gossypium raimondii]
Length = 138
Score = 144 bits (363), Expect = 7e-42
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDDDA
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDA 123
Query: 224 IEKMLNDLSLIKKFE 180
IE+MLNDLSLIKKFE
Sbjct: 124 IERMLNDLSLIKKFE 138
>XP_017982148.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Theobroma
cacao] EOX92292.1 RNA polymerase II, Rpb4, core protein
isoform 1 [Theobroma cacao] EOX92293.1 RNA polymerase
II, Rpb4, core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 144 bits (363), Expect = 7e-42
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDDDA
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDA 123
Query: 224 IEKMLNDLSLIKKFE 180
IE+MLNDLSLIKKFE
Sbjct: 124 IERMLNDLSLIKKFE 138
>XP_017648160.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Gossypium
arboreum]
Length = 139
Score = 144 bits (363), Expect = 7e-42
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDDDA
Sbjct: 65 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDA 124
Query: 224 IEKMLNDLSLIKKFE 180
IE+MLNDLSLIKKFE
Sbjct: 125 IERMLNDLSLIKKFE 139
>XP_018818161.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Juglans regia]
Length = 138
Score = 144 bits (362), Expect = 1e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>OAY44344.1 hypothetical protein MANES_08G141900 [Manihot esculenta] OAY44346.1
hypothetical protein MANES_08G141900 [Manihot esculenta]
Length = 138
Score = 144 bits (362), Expect = 1e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>XP_002282413.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] CAN80281.1 hypothetical protein VITISV_017448
[Vitis vinifera] CBI22042.3 unnamed protein product,
partial [Vitis vinifera]
Length = 138
Score = 144 bits (362), Expect = 1e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>XP_012089384.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
curcas]
Length = 138
Score = 144 bits (362), Expect = 1e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>XP_002307132.1 hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
XP_002310604.1 hypothetical protein POPTR_0007s06660g
[Populus trichocarpa] XP_011021942.1 PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Populus
euphratica] XP_011021944.1 PREDICTED: DNA-directed RNA
polymerase II subunit 4 [Populus euphratica]
XP_011025594.1 PREDICTED: DNA-directed RNA polymerase II
subunit 4 [Populus euphratica] EEE91054.1 hypothetical
protein POPTR_0007s06660g [Populus trichocarpa]
EEE94128.1 hypothetical protein POPTR_0005s08690g
[Populus trichocarpa]
Length = 138
Score = 144 bits (362), Expect = 1e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>OAY44345.1 hypothetical protein MANES_08G141900 [Manihot esculenta]
Length = 155
Score = 144 bits (362), Expect = 2e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 81 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 140
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 141 IEKMLNDLSLIKKFE 155
>KDP23744.1 hypothetical protein JCGZ_23577 [Jatropha curcas]
Length = 164
Score = 144 bits (362), Expect = 2e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 90 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 149
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 150 IEKMLNDLSLIKKFE 164
>XP_016678477.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Gossypium
hirsutum]
Length = 177
Score = 144 bits (363), Expect = 2e-41
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDDDA
Sbjct: 103 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDDA 162
Query: 224 IEKMLNDLSLIKKFE 180
IE+MLNDLSLIKKFE
Sbjct: 163 IERMLNDLSLIKKFE 177
>OAY42008.1 hypothetical protein MANES_09G146500 [Manihot esculenta] OAY42009.1
hypothetical protein MANES_09G146500 [Manihot esculenta]
Length = 138
Score = 142 bits (359), Expect = 3e-41
Identities = 68/75 (90%), Positives = 74/75 (98%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAV+QVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSI+++GR HDD+A
Sbjct: 64 RFSRYKNPDAVKQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>KZV58512.1 hypothetical protein F511_23765 [Dorcoceras hygrometricum]
Length = 138
Score = 142 bits (359), Expect = 3e-41
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEA+ MVPSI++RGR HDD+A
Sbjct: 64 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAINMVPSIKTRGRAHDDEA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKMLNDLSLIKKFE
Sbjct: 124 IEKMLNDLSLIKKFE 138
>XP_017244290.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Daucus carota
subsp. sativus] KZM98375.1 hypothetical protein
DCAR_014263 [Daucus carota subsp. sativus]
Length = 138
Score = 142 bits (358), Expect = 4e-41
Identities = 70/75 (93%), Positives = 73/75 (97%)
Frame = -1
Query: 404 RFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAVAMVPSIRSRGRGHDDDA 225
RFSRYKNPD VRQVREILSRYQLAEFELCVLGNLCPETVEEA+AMVPSIRSRGRG DDDA
Sbjct: 64 RFSRYKNPDTVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIRSRGRGLDDDA 123
Query: 224 IEKMLNDLSLIKKFE 180
IEKML+DLSLIKKF+
Sbjct: 124 IEKMLHDLSLIKKFD 138