BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00012564
         (1572 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017254413.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   444   e-149
GAV86168.1 RRM_1 domain-containing protein [Cephalotus follicula...   421   e-140
XP_017977954.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   419   e-139
EOY10723.1 RNA-binding family protein isoform 4 [Theobroma cacao]     419   e-139
XP_007030220.2 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   419   e-139
EOY10720.1 RNA-binding family protein isoform 1 [Theobroma cacao...   419   e-139
XP_010650583.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   415   e-138
XP_019075823.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   414   e-138
XP_012092704.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   414   e-137
XP_012092703.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   414   e-137
XP_002270244.2 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   414   e-137
OAY44414.1 hypothetical protein MANES_08G148100 [Manihot esculenta]   408   e-135
OAY44413.1 hypothetical protein MANES_08G148100 [Manihot esculenta]   408   e-135
XP_002319145.2 hypothetical protein POPTR_0013s05120g [Populus t...   407   e-134
KHF98520.1 RNA-binding 40 [Gossypium arboreum]                        406   e-134
XP_017627472.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   404   e-133
XP_011034421.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   404   e-133
XP_016672947.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   402   e-132
XP_016672939.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   402   e-132
XP_018834827.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   400   e-131

>XP_017254413.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            [Daucus carota subsp. sativus] XP_017254414.1 PREDICTED:
            U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            [Daucus carota subsp. sativus]
          Length = 473

 Score =  444 bits (1141), Expect = e-149
 Identities = 244/389 (62%), Positives = 273/389 (70%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDFTNEALALQA RQLNGLRFLGKVLSVERAS+P E  K+Q  E Q+ K+S+ 
Sbjct: 73   RLRNCAFVDFTNEALALQALRQLNGLRFLGKVLSVERASRPTENSKNQ-CETQVKKESTS 131

Query: 182  SMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILNALI 361
            S  D P+GKD  A AK+ SL G+EPIAERLGVDYPFPPHLEYAYPPPDGNILTNI+NALI
Sbjct: 132  STNDAPLGKDPCAEAKIGSLLGSEPIAERLGVDYPFPPHLEYAYPPPDGNILTNIVNALI 191

Query: 362  AVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFXXXX 541
            AVPRFYTQVLHLMNKMNIPAPFRMAL                          N++     
Sbjct: 192  AVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPEPLPPPPPPLPPAIPENTKLSYLS 251

Query: 542  XXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTAVLI 721
                          D E+ +G  +  + KRKR KRE IVGPAVDKDV HEAVGLK A L 
Sbjct: 252  SGESEMESSEEEAGDTEHRKGVLKTVKRKRKRNKREDIVGPAVDKDVDHEAVGLKQATLT 311

Query: 722  PKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXXXXX 901
             KEIP+IKKNNPVLQIKI PRQIQN+E    T KE E   ++N  P              
Sbjct: 312  AKEIPMIKKNNPVLQIKITPRQIQNDE----TAKEVES--EENNFPKQCASLEELEKGKL 365

Query: 902  XXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSIKLM 1081
                     MFKNY AGNPT+VLYIKNL+KDVV DDFYFIFG+FFESI  AKS+LSIKLM
Sbjct: 366  PPEEILSLPMFKNYKAGNPTNVLYIKNLSKDVVADDFYFIFGAFFESIAGAKSDLSIKLM 425

Query: 1082 QEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            QEGRMRGQAFLTFPS+ELAHHA +++++G
Sbjct: 426  QEGRMRGQAFLTFPSIELAHHA-LNLVNG 453


>GAV86168.1 RRM_1 domain-containing protein [Cephalotus follicularis]
          Length = 493

 Score =  421 bits (1083), Expect = e-140
 Identities = 232/386 (60%), Positives = 259/386 (67%), Gaps = 4/386 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGK---D 172
            RL+NCAFVDF NEALA QAQRQLNGLRFLGK+LSV+RASKP E DK  QSEPQ GK    
Sbjct: 84   RLKNCAFVDFKNEALAYQAQRQLNGLRFLGKILSVDRASKPTENDKLHQSEPQPGKGFAQ 143

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
             S  +KD  + +DL  G K  S+   EPIA RLG+DYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 144  PSSLLKDASMTRDLGEGLKSGSVAACEPIAPRLGIDYPFPPHLEYAYPPPDGNILTNIVN 203

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                         A  +  
Sbjct: 204  ALIAVPRFYTQVLHLMNKMNIPAPFRMAL----PTPPLPPSAPAPPPPPVPSVAARLQSA 259

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           VVD  N  GA  V + +RKR ++EAIVGPAVDKDVAHEAVG+K A
Sbjct: 260  DLSSDESEMESSDDEVVDKANSVGALTVVKSRRKRARKEAIVGPAVDKDVAHEAVGVKPA 319

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVK-KNLNPXXXXXXXXXX 889
             L+PKEIP+IKK NPVLQIK  P++ QNE KD     E EEP K +  +           
Sbjct: 320  SLVPKEIPIIKKKNPVLQIKFTPKRTQNEHKDDSIPTEVEEPDKEEGSDQKPFATPEELV 379

Query: 890  XXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLS 1069
                         MFKNY+AGNP  VLY+KNLAKDVV DDFYFIFGS FE+I AAKS L+
Sbjct: 380  SGKLPPEEILSLPMFKNYAAGNPAPVLYLKNLAKDVVPDDFYFIFGSLFENIDAAKSGLT 439

Query: 1070 IKLMQEGRMRGQAFLTFPSVELAHHA 1147
            +KLMQEGRMRGQAF+TFPSVELA HA
Sbjct: 440  VKLMQEGRMRGQAFVTFPSVELAQHA 465


>XP_017977954.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X2 [Theobroma cacao]
          Length = 465

 Score =  419 bits (1077), Expect = e-139
 Identities = 233/394 (59%), Positives = 267/394 (67%), Gaps = 5/394 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKD--- 172
            +LRNCAFVDF NEALA QAQRQLNGLRFLGKVLSVERASK  E +K QQ+  Q GKD   
Sbjct: 58   KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 117

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S+  +KD  + +DL  G++L S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 118  SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 177

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                             F 
Sbjct: 178  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPQPPPPPPLPASTPTEPHFA 237

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D          A+  RKR +REAIVGPA+DK VAHEAVG+K A
Sbjct: 238  DASSSESEMESSDEEVND-------KGTAKSARKRARREAIVGPAIDKSVAHEAVGVKPA 290

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADT--LKESEEPVKKNLNPXXXXXXXXX 886
             LIPKEIP IKK NPVLQIKIAP+ I NE+KD D    + SEEP +++ +          
Sbjct: 291  TLIPKEIPFIKKKNPVLQIKIAPKHIPNEQKDDDDDYKRISEEPNEEDSDAKCFATADEL 350

Query: 887  XXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNL 1066
                          MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AAKS L
Sbjct: 351  EKGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAKSGL 410

Query: 1067 SIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            ++KLMQEGRMRGQAF+TFP+VELAHHA +++++G
Sbjct: 411  NVKLMQEGRMRGQAFVTFPAVELAHHA-LNLVNG 443


>EOY10723.1 RNA-binding family protein isoform 4 [Theobroma cacao]
          Length = 487

 Score =  419 bits (1078), Expect = e-139
 Identities = 233/400 (58%), Positives = 267/400 (66%), Gaps = 5/400 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKD--- 172
            +LRNCAFVDF NEALA QAQRQLNGLRFLGKVLSVERASK  E +K QQ+  Q GKD   
Sbjct: 72   KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 131

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S+  +KD  + +DL  G++L S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 132  SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 191

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                             F 
Sbjct: 192  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPQPPPPPPLPASTPTEPHFA 251

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D          A+  RKR +REAIVGPA+DK VAHEAVG+K A
Sbjct: 252  DASSSESEMESSDEEVND-------KGTAKSARKRARREAIVGPAIDKSVAHEAVGVKPA 304

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADT--LKESEEPVKKNLNPXXXXXXXXX 886
             LIPKEIP IKK NP+LQIKIAP+ I NE+KD D    + SEEP +++ +          
Sbjct: 305  TLIPKEIPFIKKKNPILQIKIAPKHIPNEQKDDDDDYKRISEEPNEEDSDAKCFATADEL 364

Query: 887  XXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNL 1066
                          MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AAKS L
Sbjct: 365  EKGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAKSGL 424

Query: 1067 SIKLMQEGRMRGQAFLTFPSVELAHHASVSVISGGKTACF 1186
            ++KLMQEGRMRGQAF+TFP+VELAHHA   ++   + +CF
Sbjct: 425  NVKLMQEGRMRGQAFVTFPAVELAHHA---LVCFSQVSCF 461


>XP_007030220.2 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X1 [Theobroma cacao]
          Length = 479

 Score =  419 bits (1077), Expect = e-139
 Identities = 233/394 (59%), Positives = 267/394 (67%), Gaps = 5/394 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKD--- 172
            +LRNCAFVDF NEALA QAQRQLNGLRFLGKVLSVERASK  E +K QQ+  Q GKD   
Sbjct: 72   KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 131

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S+  +KD  + +DL  G++L S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 132  SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 191

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                             F 
Sbjct: 192  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPQPPPPPPLPASTPTEPHFA 251

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D          A+  RKR +REAIVGPA+DK VAHEAVG+K A
Sbjct: 252  DASSSESEMESSDEEVND-------KGTAKSARKRARREAIVGPAIDKSVAHEAVGVKPA 304

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADT--LKESEEPVKKNLNPXXXXXXXXX 886
             LIPKEIP IKK NPVLQIKIAP+ I NE+KD D    + SEEP +++ +          
Sbjct: 305  TLIPKEIPFIKKKNPVLQIKIAPKHIPNEQKDDDDDYKRISEEPNEEDSDAKCFATADEL 364

Query: 887  XXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNL 1066
                          MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AAKS L
Sbjct: 365  EKGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAKSGL 424

Query: 1067 SIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            ++KLMQEGRMRGQAF+TFP+VELAHHA +++++G
Sbjct: 425  NVKLMQEGRMRGQAFVTFPAVELAHHA-LNLVNG 457


>EOY10720.1 RNA-binding family protein isoform 1 [Theobroma cacao] EOY10721.1
            RNA-binding family protein isoform 1 [Theobroma cacao]
            EOY10722.1 RNA-binding family protein isoform 1
            [Theobroma cacao]
          Length = 479

 Score =  419 bits (1076), Expect = e-139
 Identities = 232/394 (58%), Positives = 267/394 (67%), Gaps = 5/394 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKD--- 172
            +LRNCAFVDF NEALA QAQRQLNGLRFLGKVLSVERASK  E +K QQ+  Q GKD   
Sbjct: 72   KLRNCAFVDFKNEALASQAQRQLNGLRFLGKVLSVERASKTTEDNKPQQTGVQPGKDFPQ 131

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S+  +KD  + +DL  G++L S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 132  SASMVKDASLARDLNQGSRLRSVPTSEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 191

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                             F 
Sbjct: 192  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPQPPPPPPLPASTPTEPHFA 251

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D          A+  RKR +REAIVGPA+DK VAHEAVG+K A
Sbjct: 252  DASSSESEMESSDEEVND-------KGTAKSARKRARREAIVGPAIDKSVAHEAVGVKPA 304

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADT--LKESEEPVKKNLNPXXXXXXXXX 886
             LIPKEIP IKK NP+LQIKIAP+ I NE+KD D    + SEEP +++ +          
Sbjct: 305  TLIPKEIPFIKKKNPILQIKIAPKHIPNEQKDDDDDYKRISEEPNEEDSDAKCFATADEL 364

Query: 887  XXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNL 1066
                          MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AAKS L
Sbjct: 365  EKGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAKSGL 424

Query: 1067 SIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            ++KLMQEGRMRGQAF+TFP+VELAHHA +++++G
Sbjct: 425  NVKLMQEGRMRGQAFVTFPAVELAHHA-LNLVNG 457


>XP_010650583.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X1 [Vitis vinifera]
          Length = 463

 Score =  415 bits (1067), Expect = e-138
 Identities = 230/393 (58%), Positives = 263/393 (66%), Gaps = 4/393 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKD--- 172
            RLRNCAFVDF +E LA QA RQLNGLRFLGKVL VERA+KP E DK Q+SE   GKD   
Sbjct: 56   RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKDLTK 114

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
             +  +KD  + +DL  G K +SLP +EPIA RLG+DYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 115  PASLIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNIVN 174

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFY QVLHLMNKMNIPAPFRMAL                               
Sbjct: 175  ALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPIPPPVPAPPTPPPPPEAARPNLED--- 231

Query: 533  XXXXXXXXXXXXXXXVVDAENYR-GASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKT 709
                            VD + Y  G  R  +P RKR+KREAI GP VDKDVAHEAVG+K 
Sbjct: 232  --LSSGESEMESSDEEVDGKAYSPGPPRETKPGRKRVKREAIAGPGVDKDVAHEAVGVKP 289

Query: 710  AVLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXX 889
            A L+PKEIP+IKK NPVLQIKIAP+ I   + +   +KESE+  K++ +           
Sbjct: 290  ATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKESEDSEKEDFDLKHYATLEELK 349

Query: 890  XXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLS 1069
                         MFKNY+AGNP  VLYIKNLAKDVVVDDFYFIFGS F S+ AAKS LS
Sbjct: 350  SGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLS 409

Query: 1070 IKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            +KLMQEGRMRGQAF+TFPSVELAHHA ++V++G
Sbjct: 410  VKLMQEGRMRGQAFVTFPSVELAHHA-LNVVNG 441


>XP_019075823.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X2 [Vitis vinifera]
          Length = 448

 Score =  414 bits (1065), Expect = e-138
 Identities = 229/389 (58%), Positives = 258/389 (66%), Gaps = 4/389 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKD--- 172
            RLRNCAFVDF +E LA QA RQLNGLRFLGKVL VERA+KP E DK Q+SE   GKD   
Sbjct: 56   RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKDLTK 114

Query: 173  SSFSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
             +  +KD  + +DL  G K +SLP +EPIA RLG+DYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 115  PASLIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNIVN 174

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFY QVLHLMNKMNIPAPFRMAL                               
Sbjct: 175  ALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPIPPPVPAPPTPPPPPEAARPNLED--- 231

Query: 533  XXXXXXXXXXXXXXXVVDAENYR-GASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKT 709
                            VD + Y  G  R  +P RKR+KREAI GP VDKDVAHEAVG+K 
Sbjct: 232  --LSSGESEMESSDEEVDGKAYSPGPPRETKPGRKRVKREAIAGPGVDKDVAHEAVGVKP 289

Query: 710  AVLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXX 889
            A L+PKEIP+IKK NPVLQIKIAP+ I   + +   +KESE+  K++ +           
Sbjct: 290  ATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKESEDSEKEDFDLKHYATLEELK 349

Query: 890  XXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLS 1069
                         MFKNY+AGNP  VLYIKNLAKDVVVDDFYFIFGS F S+ AAKS LS
Sbjct: 350  SGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLS 409

Query: 1070 IKLMQEGRMRGQAFLTFPSVELAHHASVS 1156
            +KLMQEGRMRGQAF+TFPSVELAHHA  S
Sbjct: 410  VKLMQEGRMRGQAFVTFPSVELAHHALAS 438


>XP_012092704.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X2 [Jatropha curcas]
          Length = 450

 Score =  414 bits (1064), Expect = e-137
 Identities = 226/389 (58%), Positives = 262/389 (67%), Gaps = 3/389 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF NEALA QAQRQLNGLRFLGKVL+VE+A+KP + +K+ QSE QLGKD + 
Sbjct: 50   RLRNCAFVDFKNEALAYQAQRQLNGLRFLGKVLAVEKANKPNKDNKNNQSETQLGKDHTA 109

Query: 182  SM---KDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
                 K+  +  D   G+K  S P TEPIA RLGVDYPFPP+LEYAYPPPDGNILTNI+N
Sbjct: 110  PTSVKKNASVTGDFADGSK--STPATEPIAPRLGVDYPFPPYLEYAYPPPDGNILTNIVN 167

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                               
Sbjct: 168  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSAPAPSPPPPPPPTTVAE-KPHLA 226

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D  +  G SR  +  RKR++REAIVGPAVDKDVAHEAVG+K +
Sbjct: 227  DLSSSESEIESSDEEVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDKDVAHEAVGVKPS 286

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXX 892
             L+PKEIP+IKK NPVLQIKIAP+  QNE+KD   +KESE+P K+ L+            
Sbjct: 287  ALVPKEIPVIKKKNPVLQIKIAPKVTQNEQKDDSIVKESEKPDKEGLDHKNYATPEELES 346

Query: 893  XXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSI 1072
                         FKNY+ G+P SVLYIKNL+KDVV DDF++IFGS F SI AAK  L++
Sbjct: 347  NKLAPEEILSLPKFKNYTVGSPASVLYIKNLSKDVVADDFFYIFGSLFGSINAAKVGLNV 406

Query: 1073 KLMQEGRMRGQAFLTFPSVELAHHASVSV 1159
            KLMQEGRMRGQAF+TFPSVELAH A + +
Sbjct: 407  KLMQEGRMRGQAFVTFPSVELAHQALMKI 435


>XP_012092703.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X1 [Jatropha curcas]
          Length = 459

 Score =  414 bits (1063), Expect = e-137
 Identities = 227/392 (57%), Positives = 266/392 (67%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF NEALA QAQRQLNGLRFLGKVL+VE+A+KP + +K+ QSE QLGKD + 
Sbjct: 50   RLRNCAFVDFKNEALAYQAQRQLNGLRFLGKVLAVEKANKPNKDNKNNQSETQLGKDHTA 109

Query: 182  SM---KDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
                 K+  +  D   G+K  S P TEPIA RLGVDYPFPP+LEYAYPPPDGNILTNI+N
Sbjct: 110  PTSVKKNASVTGDFADGSK--STPATEPIAPRLGVDYPFPPYLEYAYPPPDGNILTNIVN 167

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                               
Sbjct: 168  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSAPAPSPPPPPPPTTVAE-KPHLA 226

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D  +  G SR  +  RKR++REAIVGPAVDKDVAHEAVG+K +
Sbjct: 227  DLSSSESEIESSDEEVDDKASSLGTSRAVKSGRKRVRREAIVGPAVDKDVAHEAVGVKPS 286

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXX 892
             L+PKEIP+IKK NPVLQIKIAP+  QNE+KD   +KESE+P K+ L+            
Sbjct: 287  ALVPKEIPVIKKKNPVLQIKIAPKVTQNEQKDDSIVKESEKPDKEGLDHKNYATPEELES 346

Query: 893  XXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSI 1072
                         FKNY+ G+P SVLYIKNL+KDVV DDF++IFGS F SI AAK  L++
Sbjct: 347  NKLAPEEILSLPKFKNYTVGSPASVLYIKNLSKDVVADDFFYIFGSLFGSINAAKVGLNV 406

Query: 1073 KLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            KLMQEGRMRGQAF+TFPSVELAH A +++++G
Sbjct: 407  KLMQEGRMRGQAFVTFPSVELAHQA-LNLVNG 437


>XP_002270244.2 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            [Vitis vinifera] CBI17231.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 463

 Score =  414 bits (1063), Expect = e-137
 Identities = 229/393 (58%), Positives = 262/393 (66%), Gaps = 4/393 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF +E LA QA RQLNGLRFLGKVL VERA+KP E DK Q+SE   GKD + 
Sbjct: 56   RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKDLTK 114

Query: 182  SM---KDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
             +   KD  + +DL  G K +SLP +EPIA RLG+DYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 115  PVSLIKDFTMARDLDEGLKSSSLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNIVN 174

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFY QVLHLMNKMNIPAPFRMAL                               
Sbjct: 175  ALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPLPPPVPAPPPPPPPPEAARPNLED--- 231

Query: 533  XXXXXXXXXXXXXXXVVDAENYR-GASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKT 709
                            VD   Y  G  R  +P RKR+KREAIVGP VDKDVAHEAVG+K 
Sbjct: 232  --LSSGESEMESSDEEVDGNAYSTGPPRETKPGRKRVKREAIVGPGVDKDVAHEAVGVKP 289

Query: 710  AVLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXX 889
            A L+PKEIP+IKK NPVLQIKI P+ I   + +   +KESE+  K++ +           
Sbjct: 290  ATLVPKEIPMIKKKNPVLQIKIVPKVITEHKDECSIMKESEDSEKEDFDLKPYATLEELK 349

Query: 890  XXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLS 1069
                         MFKNY+AGNP  VLYIKNLAKDVVVDDFYFIFGS F S+ AAKS LS
Sbjct: 350  SGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLS 409

Query: 1070 IKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            +KLMQEGRMRGQAF+TFPSVELAHHA +++++G
Sbjct: 410  VKLMQEGRMRGQAFVTFPSVELAHHA-LNLVNG 441


>OAY44414.1 hypothetical protein MANES_08G148100 [Manihot esculenta]
          Length = 425

 Score =  408 bits (1049), Expect = e-135
 Identities = 227/392 (57%), Positives = 265/392 (67%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF NEALA QAQRQLNGLRFLGKVL+VERA+KP E +KH+QSE QLGKD + 
Sbjct: 20   RLRNCAFVDFKNEALAHQAQRQLNGLRFLGKVLAVERANKPNEDNKHKQSEAQLGKDYAA 79

Query: 182  SM---KDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
                 K   I +D+   +K  S+P +E IA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 80   PTSVEKKASIIRDIGNDSK--SIPASEAIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 137

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                               
Sbjct: 138  ALIAVPRFYTQVLHLMNKMNIPAPFRMAL-----PTPPLPPSVAPPEPPPPPIATAKPHL 192

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D  ++   S   + +RKR +RE+IVGPAVDKDVAHEAVGLK +
Sbjct: 193  ADSSSESEMESSDEEVDDKASHVETSGAVKSRRKRARRESIVGPAVDKDVAHEAVGLKPS 252

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXX 892
             L+PKEIP+IKK NPVLQIKIAP+   NE+KD   +KE EEP+ + L+            
Sbjct: 253  SLVPKEIPVIKKKNPVLQIKIAPKVTPNEQKDDGIMKEFEEPLDEGLDHKPYATPEEIES 312

Query: 893  XXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSI 1072
                         FKNY+ GNPTSVLYIKNL+KD+V DDF+FIFGS F  I AAK+ LS+
Sbjct: 313  NKLAPEEILSLPKFKNYTVGNPTSVLYIKNLSKDMVPDDFFFIFGSLFGGIDAAKTGLSV 372

Query: 1073 KLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            KLMQEGRMRGQAF+TFPSVELAH A +++++G
Sbjct: 373  KLMQEGRMRGQAFVTFPSVELAHQA-LNLVNG 403


>OAY44413.1 hypothetical protein MANES_08G148100 [Manihot esculenta]
          Length = 454

 Score =  408 bits (1049), Expect = e-135
 Identities = 227/392 (57%), Positives = 265/392 (67%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF NEALA QAQRQLNGLRFLGKVL+VERA+KP E +KH+QSE QLGKD + 
Sbjct: 49   RLRNCAFVDFKNEALAHQAQRQLNGLRFLGKVLAVERANKPNEDNKHKQSEAQLGKDYAA 108

Query: 182  SM---KDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
                 K   I +D+   +K  S+P +E IA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 109  PTSVEKKASIIRDIGNDSK--SIPASEAIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 166

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                               
Sbjct: 167  ALIAVPRFYTQVLHLMNKMNIPAPFRMAL-----PTPPLPPSVAPPEPPPPPIATAKPHL 221

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D  ++   S   + +RKR +RE+IVGPAVDKDVAHEAVGLK +
Sbjct: 222  ADSSSESEMESSDEEVDDKASHVETSGAVKSRRKRARRESIVGPAVDKDVAHEAVGLKPS 281

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXX 892
             L+PKEIP+IKK NPVLQIKIAP+   NE+KD   +KE EEP+ + L+            
Sbjct: 282  SLVPKEIPVIKKKNPVLQIKIAPKVTPNEQKDDGIMKEFEEPLDEGLDHKPYATPEEIES 341

Query: 893  XXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSI 1072
                         FKNY+ GNPTSVLYIKNL+KD+V DDF+FIFGS F  I AAK+ LS+
Sbjct: 342  NKLAPEEILSLPKFKNYTVGNPTSVLYIKNLSKDMVPDDFFFIFGSLFGGIDAAKTGLSV 401

Query: 1073 KLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            KLMQEGRMRGQAF+TFPSVELAH A +++++G
Sbjct: 402  KLMQEGRMRGQAFVTFPSVELAHQA-LNLVNG 432


>XP_002319145.2 hypothetical protein POPTR_0013s05120g [Populus trichocarpa]
            EEE95068.2 hypothetical protein POPTR_0013s05120g
            [Populus trichocarpa]
          Length = 479

 Score =  407 bits (1047), Expect = e-134
 Identities = 228/392 (58%), Positives = 258/392 (65%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF +E LA QA RQLNGLRFLGKVLSVERASK  E  K +QSE Q GKDS  
Sbjct: 71   RLRNCAFVDFQSEGLAYQAHRQLNGLRFLGKVLSVERASKLNEDSKFKQSEAQQGKDSVL 130

Query: 182  S---MKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
                MKD  + +D+  G+   SLP +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 131  PTSLMKDASVTRDVIEGSNFGSLPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 190

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                          NS   
Sbjct: 191  ALIAVPRFYTQVLHLMNKMNIPAPFRMAL---PTPPLPLPPPSPPPPPPPPCLTENSSLA 247

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D   Y GAS   + +RKRIKR+AIVGPA DKDV HE+VGLK A
Sbjct: 248  EQSSSESEMESSDEEVDDKAPY-GASGAVKQRRKRIKRKAIVGPAADKDVVHESVGLKPA 306

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXX 892
             L+PKEIP+IKK N VLQIKIAP+   NE KD   + ESE+P  +  +            
Sbjct: 307  SLVPKEIPIIKKKNTVLQIKIAPKVTHNEYKDDSIMTESEDPGTEGSDQKHYATAEEIES 366

Query: 893  XXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSI 1072
                         FKNY+ GNP SVLYIKNL K+VV DDF++IFGS F SI AAKS LS+
Sbjct: 367  KRLVPEEILSLPKFKNYTVGNPASVLYIKNLDKEVVADDFFYIFGSLFGSIDAAKSGLSV 426

Query: 1073 KLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            KLMQEGRMRGQAF+TF SVELAH A +++++G
Sbjct: 427  KLMQEGRMRGQAFVTFSSVELAHQA-LNLVNG 457


>KHF98520.1 RNA-binding 40 [Gossypium arboreum]
          Length = 464

 Score =  406 bits (1044), Expect = e-134
 Identities = 232/396 (58%), Positives = 264/396 (66%), Gaps = 7/396 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            +LRNCAFVDF NEALA QA RQLNGLRFLGKVL VERASKPAE +K QQ+  QLGKD S 
Sbjct: 72   KLRNCAFVDFKNEALASQAHRQLNGLRFLGKVLLVERASKPAEHNKPQQTGVQLGKDFSQ 131

Query: 182  S---MKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S   +KD    +D   G++  S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 132  SASLLKDANSTRDPNLGSRSGSIPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 191

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                          + E  
Sbjct: 192  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPVPAPQQPPPPPASTLAQPHLE-- 249

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                             DA     +S V +  RKR +RE IVGPA+DK VAHEAVG+K A
Sbjct: 250  -----------------DA-----SSSVPKSARKRARREVIVGPAIDKSVAHEAVGVKPA 287

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEK----DADTLKESEEPVKKNLNPXXXXXXX 880
             LIPKEIPLIKK NP+LQIKIAP+ I  E+K    D D  +  EEP ++ L         
Sbjct: 288  TLIPKEIPLIKKKNPLLQIKIAPKHIPYEQKDDGADDDHKQILEEPNEEGLGAKQFASAD 347

Query: 881  XXXXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKS 1060
                            MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AA S
Sbjct: 348  ELEKGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAAS 407

Query: 1061 NLSIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
             L++KLMQEGRMRGQAF+TFPSVELAHHA +++++G
Sbjct: 408  GLNVKLMQEGRMRGQAFVTFPSVELAHHA-LNLVNG 442


>XP_017627472.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            [Gossypium arboreum] XP_017627473.1 PREDICTED: U11/U12
            small nuclear ribonucleoprotein 65 kDa protein [Gossypium
            arboreum] XP_017627474.1 PREDICTED: U11/U12 small nuclear
            ribonucleoprotein 65 kDa protein [Gossypium arboreum]
          Length = 479

 Score =  404 bits (1038), Expect = e-133
 Identities = 228/396 (57%), Positives = 263/396 (66%), Gaps = 7/396 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            +LRNCAF+DF NEALA QA RQLNGLRFLGKVL VERASKPAE +K QQ+  QLGKD S 
Sbjct: 72   KLRNCAFLDFKNEALASQAHRQLNGLRFLGKVLLVERASKPAEHNKPQQTGVQLGKDFSQ 131

Query: 182  S---MKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S   +KD    +D   G++  S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 132  SASLLKDANSTRDPNLGSRSGSIPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 191

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                          + E  
Sbjct: 192  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPVPAPQQPPPPPASTLAQPHLE-- 249

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           +  ++       V +  RKR +RE IVGPA+DK VAHEAVG+K A
Sbjct: 250  -------DASSSESEMESSDEEVNDKGVPKSARKRARREVIVGPAIDKSVAHEAVGVKPA 302

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEK----DADTLKESEEPVKKNLNPXXXXXXX 880
             LIPKEIPLIKK NP+LQIKIAP+ I  E+K    D D  +  EEP ++ L         
Sbjct: 303  TLIPKEIPLIKKKNPLLQIKIAPKHIPYEQKDDGADDDHKQILEEPNEEGLGAKQFASAD 362

Query: 881  XXXXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKS 1060
                            MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AA S
Sbjct: 363  ELEKGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAAS 422

Query: 1061 NLSIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
             L++KLMQEGRMRGQAF+TFPSVELAHHA +++++G
Sbjct: 423  GLNVKLMQEGRMRGQAFVTFPSVELAHHA-LNLVNG 457


>XP_011034421.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
            protein-like [Populus euphratica]
          Length = 479

 Score =  404 bits (1037), Expect = e-133
 Identities = 226/392 (57%), Positives = 257/392 (65%), Gaps = 3/392 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            RLRNCAFVDF +E LA QA RQLNGLRFLGKVLSVERASK  E  K +QSE Q GKDS  
Sbjct: 71   RLRNCAFVDFKSEGLAYQAHRQLNGLRFLGKVLSVERASKLNEDSKFKQSEAQQGKDSVL 130

Query: 182  S---MKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
                MKD  + +D+  G+   SLP +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 131  PTSLMKDASVTRDVIEGSNFGSLPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 190

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                          NS   
Sbjct: 191  ALIAVPRFYTQVLHLMNKMNIPAPFRMAL---PTPPLPLPQSPPPPPPPPPCLTENSPLA 247

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           V D   + GAS   + +RK  KR+AIVGPAVDKDV HE+VGLK A
Sbjct: 248  EQSSSESEMESSDEEVDDKAPF-GASGAVKQRRKHFKRKAIVGPAVDKDVVHESVGLKPA 306

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXX 892
             L+PKEIP+IKK N VLQIKIAP+   NE KD   + ESE+P  +  +            
Sbjct: 307  SLVPKEIPIIKKKNTVLQIKIAPKVTHNEYKDDSIMTESEDPGTEGSDQKHYATAEEIES 366

Query: 893  XXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSI 1072
                         FKNY+ GNP SVLYIKNL K+VV DDF++IFGS F SI AAKS LS+
Sbjct: 367  KRLAPEEILSLPKFKNYTVGNPASVLYIKNLDKEVVADDFFYIFGSLFGSIDAAKSGLSV 426

Query: 1073 KLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            KLMQEGRMRGQAF+TF SVELAH A +++++G
Sbjct: 427  KLMQEGRMRGQAFVTFSSVELAHQA-LNLVNG 457


>XP_016672947.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
            protein-like isoform X2 [Gossypium hirsutum]
            XP_016672955.1 PREDICTED: U11/U12 small nuclear
            ribonucleoprotein 65 kDa protein-like isoform X2
            [Gossypium hirsutum] XP_016672963.1 PREDICTED: U11/U12
            small nuclear ribonucleoprotein 65 kDa protein-like
            isoform X2 [Gossypium hirsutum]
          Length = 479

 Score =  402 bits (1033), Expect = e-132
 Identities = 228/396 (57%), Positives = 262/396 (66%), Gaps = 7/396 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            +LRNCAFVDF NEALA QA RQLNGLRFLGKVL VERASKPAE +K QQ+  QLGKD S 
Sbjct: 72   KLRNCAFVDFKNEALASQAHRQLNGLRFLGKVLLVERASKPAEHNKPQQTGVQLGKDFSQ 131

Query: 182  S---MKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S   +KD    +D   G++  S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 132  SASLLKDANSTRDPNLGSRSGSIPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 191

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                          + E  
Sbjct: 192  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPVPAPQQPPPPPASTLAQPHLE-- 249

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           +  ++       V +  RKR +RE IVGPA+DK VAHEAVG+K A
Sbjct: 250  -------DASSSESEMESSDEEFNDKGVPKSARKRARREVIVGPAIDKSVAHEAVGVKPA 302

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEK----DADTLKESEEPVKKNLNPXXXXXXX 880
             LIPKEIPLIKK NP+LQIKIAP+ I  E+K    D D  +  EEP ++ L         
Sbjct: 303  TLIPKEIPLIKKKNPLLQIKIAPKHIPYEQKDDGADDDHKQILEEPNEEGLGAKQFASAD 362

Query: 881  XXXXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKS 1060
                            MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AA S
Sbjct: 363  ELEKGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAAS 422

Query: 1061 NLSIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
             L++KLMQEGRMRGQAF+TFPSVELAH A +++++G
Sbjct: 423  GLNVKLMQEGRMRGQAFVTFPSVELAHRA-LNLVNG 457


>XP_016672939.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
            protein-like isoform X1 [Gossypium hirsutum]
          Length = 521

 Score =  402 bits (1033), Expect = e-132
 Identities = 228/396 (57%), Positives = 262/396 (66%), Gaps = 7/396 (1%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERASKPAEGDKHQQSEPQLGKDSSF 181
            +LRNCAFVDF NEALA QA RQLNGLRFLGKVL VERASKPAE +K QQ+  QLGKD S 
Sbjct: 114  KLRNCAFVDFKNEALASQAHRQLNGLRFLGKVLLVERASKPAEHNKPQQTGVQLGKDFSQ 173

Query: 182  S---MKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILN 352
            S   +KD    +D   G++  S+P +EPIA RLGVDYPFPPHLEYAYPPPDGNILTNI+N
Sbjct: 174  SASLLKDANSTRDPNLGSRSGSIPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVN 233

Query: 353  ALIAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFX 532
            ALIAVPRFYTQVLHLMNKMNIPAPFRMAL                          + E  
Sbjct: 234  ALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPVPAPQQPPPPPASTLAQPHLE-- 291

Query: 533  XXXXXXXXXXXXXXXVVDAENYRGASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTA 712
                           +  ++       V +  RKR +RE IVGPA+DK VAHEAVG+K A
Sbjct: 292  -------DASSSESEMESSDEEFNDKGVPKSARKRARREVIVGPAIDKSVAHEAVGVKPA 344

Query: 713  VLIPKEIPLIKKNNPVLQIKIAPRQIQNEEK----DADTLKESEEPVKKNLNPXXXXXXX 880
             LIPKEIPLIKK NP+LQIKIAP+ I  E+K    D D  +  EEP ++ L         
Sbjct: 345  TLIPKEIPLIKKKNPLLQIKIAPKHIPYEQKDDGADDDHKQILEEPNEEGLGAKQFASAD 404

Query: 881  XXXXXXXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKS 1060
                            MFKNY+AGNP SVLYIKNLAKDVV +DFYFIFGS F SI AA S
Sbjct: 405  ELEKGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVVPEDFYFIFGSLFGSIDAAAS 464

Query: 1061 NLSIKLMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
             L++KLMQEGRMRGQAF+TFPSVELAH A +++++G
Sbjct: 465  GLNVKLMQEGRMRGQAFVTFPSVELAHRA-LNLVNG 499


>XP_018834827.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
            isoform X2 [Juglans regia]
          Length = 546

 Score =  400 bits (1028), Expect = e-131
 Identities = 228/391 (58%), Positives = 259/391 (66%), Gaps = 2/391 (0%)
 Frame = +2

Query: 2    RLRNCAFVDFTNEALALQAQRQLNGLRFLGKVLSVERAS-KPAEGDKHQQSEPQLGKDSS 178
            +LRNCAF+DF NEALA QA RQLNGLRFL KVLSVERAS +P    K ++SE  +   S+
Sbjct: 145  QLRNCAFLDFKNEALAYQAFRQLNGLRFLDKVLSVERASNEPIVDTKLKKSEAHMPPTST 204

Query: 179  FSMKDIPIGKDLTAGAKLASLPGTEPIAERLGVDYPFPPHLEYAYPPPDGNILTNILNAL 358
               KD       T    L S P +EPIA RLGV+YPFPPHLEY YPPPDGNILTNI+NAL
Sbjct: 205  SMFKDA------TKHTILGSTPASEPIAPRLGVEYPFPPHLEYVYPPPDGNILTNIVNAL 258

Query: 359  IAVPRFYTQVLHLMNKMNIPAPFRMALXXXXXXXXXXXXXXXXXXXXXXXXXANSEFXXX 538
            IAVPRFYTQVLHLMNKMNIPAPFRMAL                            +    
Sbjct: 259  IAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPSSVPAPPPPPPPLSVPAKPHLEDLSSG 318

Query: 539  XXXXXXXXXXXXXVVDAENYR-GASRVARPKRKRIKREAIVGPAVDKDVAHEAVGLKTAV 715
                          +D E Y  GAS V +  RKR K+EAIVGPAVDKDVAHEAVGLK A 
Sbjct: 319  DSEMESSDEE----IDGETYLIGASTVKKFSRKRRKQEAIVGPAVDKDVAHEAVGLKPAT 374

Query: 716  LIPKEIPLIKKNNPVLQIKIAPRQIQNEEKDADTLKESEEPVKKNLNPXXXXXXXXXXXX 895
            L+PKEIP+IKK NPVLQIKIAP+ IQNE +D  T KE EEP K+ L+             
Sbjct: 375  LVPKEIPMIKKKNPVLQIKIAPKVIQNEHRDDTTSKELEEPDKEGLDIKPYATSEELESG 434

Query: 896  XXXXXXXXXXXMFKNYSAGNPTSVLYIKNLAKDVVVDDFYFIFGSFFESITAAKSNLSIK 1075
                       MFKNY+AGNPTSVLY+KNLAKDVV +DFYFIFGS F S+ A KS LS+K
Sbjct: 435  KLPPEEILSLPMFKNYTAGNPTSVLYVKNLAKDVVANDFYFIFGSLFGSVDATKSGLSVK 494

Query: 1076 LMQEGRMRGQAFLTFPSVELAHHASVSVISG 1168
            LMQEGRMRGQAF+TFPSVELAH A +++++G
Sbjct: 495  LMQEGRMRGQAFVTFPSVELAHRA-LNLVNG 524