BLASTX nr result

ID: Panax24_contig00012507 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00012507
         (587 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252384.1 PREDICTED: translation initiation factor IF-2, ch...    65   5e-09
XP_019193404.1 PREDICTED: translation initiation factor IF-2, ch...    64   2e-08
KZM94316.1 hypothetical protein DCAR_017559 [Daucus carota subsp...    62   6e-08
XP_015081953.1 PREDICTED: translation initiation factor IF-2, ch...    59   8e-07
XP_006366769.1 PREDICTED: translation initiation factor IF-2, ch...    59   8e-07
XP_004243227.1 PREDICTED: translation initiation factor IF-2, ch...    59   8e-07

>XP_017252384.1 PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Daucus carota subsp. sativus]
          Length = 1030

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -2

Query: 163 SITMASLTSLVSLGSTCTCSSGQFEGXXXXXXXXXXXRNFGSFRKVSVGKRWRY 2
           SI M S+ SLVSLGS C+CSS QFEG           ++FGSFRKV VG+RWRY
Sbjct: 4   SINMNSIASLVSLGSVCSCSSVQFEGSLSSVSRVSLSQSFGSFRKVKVGRRWRY 57


>XP_019193404.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Ipomoea nil]
          Length = 1020

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = -2

Query: 154 MASLTSLVSLGSTCTCSSGQFEGXXXXXXXXXXXRNFGSFRKVSVGKRWRY 2
           MAS+TSLV+LGS C+CSSGQFEG           +NF SFR++ VGKRW Y
Sbjct: 1   MASMTSLVNLGSVCSCSSGQFEGSSGLVGSISFAKNFRSFRRIWVGKRWPY 51


>KZM94316.1 hypothetical protein DCAR_017559 [Daucus carota subsp. sativus]
          Length = 1024

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/51 (58%), Positives = 35/51 (68%)
 Frame = -2

Query: 154 MASLTSLVSLGSTCTCSSGQFEGXXXXXXXXXXXRNFGSFRKVSVGKRWRY 2
           M S+ SLVSLGS C+CSS QFEG           ++FGSFRKV VG+RWRY
Sbjct: 1   MNSIASLVSLGSVCSCSSVQFEGSLSSVSRVSLSQSFGSFRKVKVGRRWRY 51


>XP_015081953.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Solanum pennellii]
          Length = 1010

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = -2

Query: 154 MASLTSLVSLGSTCTCSSGQFEGXXXXXXXXXXXRNFGSFRKVSVGKRWRY 2
           M+S+ SLVSLGS C CSSGQFEG           +NFGS  ++  GKRWRY
Sbjct: 1   MSSMASLVSLGSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRY 51


>XP_006366769.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Solanum tuberosum]
          Length = 1010

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = -2

Query: 154 MASLTSLVSLGSTCTCSSGQFEGXXXXXXXXXXXRNFGSFRKVSVGKRWRY 2
           M+S+ SLVSLGS C CSSGQFEG           +NFGS  ++  GKRWRY
Sbjct: 1   MSSMASLVSLGSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRY 51


>XP_004243227.1 PREDICTED: translation initiation factor IF-2, chloroplastic
           [Solanum lycopersicum]
          Length = 1010

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = -2

Query: 154 MASLTSLVSLGSTCTCSSGQFEGXXXXXXXXXXXRNFGSFRKVSVGKRWRY 2
           M+S+ SLVSLGS C CSSGQFEG           +NFGS  ++  GKRWRY
Sbjct: 1   MSSMASLVSLGSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRY 51


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