BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00012136
         (527 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016193769.1 PREDICTED: ribosomal RNA small subunit methyltran...    58   1e-06
XP_002270274.1 PREDICTED: ribosomal RNA small subunit methyltran...    56   4e-06
XP_019159453.1 PREDICTED: ribosomal RNA small subunit methyltran...    56   5e-06
XP_017216935.1 PREDICTED: ribosomal RNA small subunit methyltran...    55   6e-06
XP_017216934.1 PREDICTED: ribosomal RNA small subunit methyltran...    55   6e-06

>XP_016193769.1 PREDICTED: ribosomal RNA small subunit methyltransferase,
           chloroplastic [Arachis ipaensis]
          Length = 336

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 32/34 (94%)
 Frame = -1

Query: 527 IEEALRSIDLPPTSRPEELTIEDFVRLHSMIVKE 426
           IEEALRSI L PTSRPEELT++DFV+LH++IVKE
Sbjct: 303 IEEALRSISLLPTSRPEELTLDDFVKLHNLIVKE 336


>XP_002270274.1 PREDICTED: ribosomal RNA small subunit methyltransferase,
           chloroplastic [Vitis vinifera] CBI38785.3 unnamed
           protein product, partial [Vitis vinifera]
          Length = 335

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/33 (75%), Positives = 31/33 (93%)
 Frame = -1

Query: 527 IEEALRSIDLPPTSRPEELTIEDFVRLHSMIVK 429
           IEEALR++ LP TSRPEELT++DFVRLH++IVK
Sbjct: 302 IEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334


>XP_019159453.1 PREDICTED: ribosomal RNA small subunit methyltransferase,
           chloroplastic [Ipomoea nil]
          Length = 348

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -1

Query: 527 IEEALRSIDLPPTSRPEELTIEDFVRLHSMIVKE 426
           IEEAL S+ LPPTSRPEEL + DFVRLH++IVKE
Sbjct: 315 IEEALGSLGLPPTSRPEELALADFVRLHNLIVKE 348


>XP_017216935.1 PREDICTED: ribosomal RNA small subunit methyltransferase,
           chloroplastic isoform X2 [Daucus carota subsp. sativus]
          Length = 335

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 527 IEEALRSIDLPPTSRPEELTIEDFVRLHSMIVK 429
           IEEAL++I+LP TSRPEELTIEDFV LH++IVK
Sbjct: 292 IEEALKNINLPATSRPEELTIEDFVNLHAVIVK 324


>XP_017216934.1 PREDICTED: ribosomal RNA small subunit methyltransferase,
           chloroplastic isoform X1 [Daucus carota subsp. sativus]
           KZM86760.1 hypothetical protein DCAR_023894 [Daucus
           carota subsp. sativus]
          Length = 354

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 527 IEEALRSIDLPPTSRPEELTIEDFVRLHSMIVK 429
           IEEAL++I+LP TSRPEELTIEDFV LH++IVK
Sbjct: 311 IEEALKNINLPATSRPEELTIEDFVNLHAVIVK 343