BLASTX nr result
ID: Panax24_contig00011941
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00011941
(595 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZN00710.1 hypothetical protein DCAR_009464 [Daucus carota subsp... 114 3e-26
XP_017238932.1 PREDICTED: pentatricopeptide repeat-containing pr... 114 4e-26
CDP13864.1 unnamed protein product [Coffea canephora] 91 1e-17
XP_007138408.1 hypothetical protein PHAVU_009G206300g [Phaseolus... 87 2e-16
XP_004510607.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 3e-16
OAY43683.1 hypothetical protein MANES_08G089400 [Manihot esculen... 86 6e-16
CBI39452.3 unnamed protein product, partial [Vitis vinifera] 85 8e-16
XP_002266503.1 PREDICTED: pentatricopeptide repeat-containing pr... 85 8e-16
CAN73209.1 hypothetical protein VITISV_002838 [Vitis vinifera] 85 9e-16
XP_017180796.1 PREDICTED: pentatricopeptide repeat-containing pr... 85 1e-15
KOM40018.1 hypothetical protein LR48_Vigan04g021600 [Vigna angul... 84 2e-15
XP_017419933.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-15
XP_010544362.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 3e-15
XP_014502411.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 3e-15
XP_014502410.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 3e-15
XP_015584424.1 PREDICTED: pentatricopeptide repeat-containing pr... 83 5e-15
XP_016650190.1 PREDICTED: pentatricopeptide repeat-containing pr... 83 5e-15
EEF50296.1 pentatricopeptide repeat-containing protein, putative... 83 6e-15
XP_016184237.1 PREDICTED: pentatricopeptide repeat-containing pr... 82 7e-15
XP_019233655.1 PREDICTED: pentatricopeptide repeat-containing pr... 82 7e-15
>KZN00710.1 hypothetical protein DCAR_009464 [Daucus carota subsp. sativus]
Length = 539
Score = 114 bits (286), Expect = 3e-26
Identities = 58/90 (64%), Positives = 62/90 (68%)
Frame = -1
Query: 271 AQLINTHKPTWXXXXXXXXXXXXXXXXXXXXXLRLIKTPPKALHFFIWAHQNGFSHSHQS 92
AQLINTH PTW RLIKTP +ALHFFIWAH+NGFSH+HQS
Sbjct: 48 AQLINTHNPTWESHLSPTSLSQTTVLHTL----RLIKTPSQALHFFIWAHKNGFSHTHQS 103
Query: 91 YLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
Y LMLQIL QSRN N ARNFLFS+EKKSNG
Sbjct: 104 YFLMLQILSQSRNFNIARNFLFSVEKKSNG 133
>XP_017238932.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Daucus carota subsp. sativus]
Length = 703
Score = 114 bits (286), Expect = 4e-26
Identities = 58/90 (64%), Positives = 62/90 (68%)
Frame = -1
Query: 271 AQLINTHKPTWXXXXXXXXXXXXXXXXXXXXXLRLIKTPPKALHFFIWAHQNGFSHSHQS 92
AQLINTH PTW RLIKTP +ALHFFIWAH+NGFSH+HQS
Sbjct: 48 AQLINTHNPTWESHLSPTSLSQTTVLHTL----RLIKTPSQALHFFIWAHKNGFSHTHQS 103
Query: 91 YLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
Y LMLQIL QSRN N ARNFLFS+EKKSNG
Sbjct: 104 YFLMLQILSQSRNFNIARNFLFSVEKKSNG 133
>CDP13864.1 unnamed protein product [Coffea canephora]
Length = 751
Score = 90.5 bits (223), Expect = 1e-17
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLI TP KALHFF WAH++GF+H+ QSY LML++LCQ+RN N+ARNFL SI +KSNG
Sbjct: 106 RLITTPAKALHFFHWAHKSGFTHTPQSYFLMLELLCQARNFNSARNFLLSIPRKSNG 162
>XP_007138408.1 hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
ESW10402.1 hypothetical protein PHAVU_009G206300g
[Phaseolus vulgaris]
Length = 728
Score = 87.0 bits (214), Expect = 2e-16
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLIK P KALHFF WA Q+GF H+ QSY +MLQIL + RNLN ARN LFSIEKKSNG
Sbjct: 85 RLIKDPSKALHFFKWAQQSGFPHTAQSYFIMLQILGRHRNLNVARNLLFSIEKKSNG 141
>XP_004510607.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Cicer arietinum]
Length = 740
Score = 86.3 bits (212), Expect = 3e-16
Identities = 39/57 (68%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
R IK P KA HFF W H+NGFSH+ QSY +ML+IL + +NLN ARNFLFSIEK+SNG
Sbjct: 97 RHIKFPSKAFHFFNWVHENGFSHNSQSYFIMLEILGREKNLNVARNFLFSIEKRSNG 153
>OAY43683.1 hypothetical protein MANES_08G089400 [Manihot esculenta] OAY43684.1
hypothetical protein MANES_08G089400 [Manihot esculenta]
Length = 737
Score = 85.5 bits (210), Expect = 6e-16
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLIKTP KAL FF W Q GFSH+ QSY LML+IL ++RNLN ARNFLFSI++KSNG
Sbjct: 98 RLIKTPSKALQFFNWVSQMGFSHNDQSYFLMLEILGRARNLNVARNFLFSIKRKSNG 154
>CBI39452.3 unnamed protein product, partial [Vitis vinifera]
Length = 718
Score = 85.1 bits (209), Expect = 8e-16
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
+LI+TP KALHFF W GF+H+ QSY LM++IL +SRNLNAARNF+FSIEKKS G
Sbjct: 103 QLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGG 159
>XP_002266503.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera] XP_010650422.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vitis vinifera]
Length = 746
Score = 85.1 bits (209), Expect = 8e-16
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
+LI+TP KALHFF W GF+H+ QSY LM++IL +SRNLNAARNF+FSIEKKS G
Sbjct: 103 QLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGG 159
>CAN73209.1 hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 85.1 bits (209), Expect = 9e-16
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
+LI+TP KALHFF W GF+H+ QSY LM++IL +SRNLNAARNF+FSIEKKS G
Sbjct: 196 QLIRTPAKALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGG 252
>XP_017180796.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Malus domestica] XP_017180799.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g02060, chloroplastic [Malus domestica]
XP_017180800.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g02060, chloroplastic
[Malus domestica] XP_017180802.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Malus domestica] XP_017180803.1
PREDICTED: pentatricopeptide repeat-containing protein
At1g02060, chloroplastic [Malus domestica]
Length = 742
Score = 84.7 bits (208), Expect = 1e-15
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = -1
Query: 169 LIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
LIK P KAL FF WA GFSH+ QSY LML+IL ++RNLNAARNFLFSIEKKSNG
Sbjct: 104 LIKAPSKALQFFKWAEVMGFSHNDQSYXLMLEILGRNRNLNAARNFLFSIEKKSNG 159
>KOM40018.1 hypothetical protein LR48_Vigan04g021600 [Vigna angularis]
Length = 667
Score = 84.3 bits (207), Expect = 2e-15
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLI+ P KAL FF WA Q+GFSH+ QSY +MLQIL + RNLN ARN LFSIEKKSNG
Sbjct: 32 RLIRDPSKALRFFKWAQQSGFSHTVQSYFIMLQILGRHRNLNVARNLLFSIEKKSNG 88
>XP_017419933.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Vigna angularis] BAT79845.1 hypothetical
protein VIGAN_02278500 [Vigna angularis var. angularis]
Length = 725
Score = 84.3 bits (207), Expect = 2e-15
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLI+ P KAL FF WA Q+GFSH+ QSY +MLQIL + RNLN ARN LFSIEKKSNG
Sbjct: 90 RLIRDPSKALRFFKWAQQSGFSHTVQSYFIMLQILGRHRNLNVARNLLFSIEKKSNG 146
>XP_010544362.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Tarenaya hassleriana]
Length = 676
Score = 83.6 bits (205), Expect = 3e-15
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RL+KTP KAL FF W Q GFSH+ QS+ LML++L ++RNLN ARNFLFSI K+SNG
Sbjct: 53 RLVKTPAKALRFFDWVSQKGFSHNDQSFFLMLEVLGRARNLNVARNFLFSIRKRSNG 109
>XP_014502411.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X2 [Vigna radiata var.
radiata]
Length = 728
Score = 83.6 bits (205), Expect = 3e-15
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLI+ P KAL FF WA Q+GFSH+ QSY ++LQIL + RNLN ARN LFSIEKKSNG
Sbjct: 85 RLIRDPSKALRFFKWAQQSGFSHTAQSYFILLQILGRHRNLNVARNLLFSIEKKSNG 141
>XP_014502410.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Vigna radiata var.
radiata]
Length = 733
Score = 83.6 bits (205), Expect = 3e-15
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLI+ P KAL FF WA Q+GFSH+ QSY ++LQIL + RNLN ARN LFSIEKKSNG
Sbjct: 90 RLIRDPSKALRFFKWAQQSGFSHTAQSYFILLQILGRHRNLNVARNLLFSIEKKSNG 146
>XP_015584424.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Ricinus communis]
Length = 738
Score = 82.8 bits (203), Expect = 5e-15
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLIKTP KAL FF WA + GF+H+ QSY LML+IL ++RNLN ARNFLFSI+++SNG
Sbjct: 95 RLIKTPSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNG 151
>XP_016650190.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Prunus mume]
Length = 743
Score = 82.8 bits (203), Expect = 5e-15
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = -1
Query: 169 LIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
LIKTP KAL FF W GFSH+ QSY LML+IL ++RNLNAARN LFSIEKKSNG
Sbjct: 106 LIKTPHKALQFFKWVEVMGFSHNDQSYFLMLEILGRARNLNAARNLLFSIEKKSNG 161
>EEF50296.1 pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 82.8 bits (203), Expect = 6e-15
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
RLIKTP KAL FF WA + GF+H+ QSY LML+IL ++RNLN ARNFLFSI+++SNG
Sbjct: 94 RLIKTPSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNG 150
>XP_016184237.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Arachis ipaensis]
XP_016184238.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g02060, chloroplastic-like
isoform X2 [Arachis ipaensis] XP_016184240.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Arachis ipaensis]
XP_016184241.1 PREDICTED: pentatricopeptide
repeat-containing protein At1g02060, chloroplastic-like
isoform X1 [Arachis ipaensis] XP_016184242.1 PREDICTED:
pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Arachis ipaensis]
Length = 725
Score = 82.4 bits (202), Expect = 7e-15
Identities = 39/55 (70%), Positives = 43/55 (78%)
Frame = -1
Query: 166 IKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
IK P KA FF WAH+ GF HS QSY +ML+IL + RNLN ARNFLFSIEKKSNG
Sbjct: 102 IKEPSKAFRFFKWAHEMGFPHSAQSYFMMLEILGRQRNLNVARNFLFSIEKKSNG 156
>XP_019233655.1 PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic [Nicotiana attenuata] OIT27237.1
pentatricopeptide repeat-containing protein,
chloroplastic [Nicotiana attenuata]
Length = 764
Score = 82.4 bits (202), Expect = 7e-15
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = -1
Query: 172 RLIKTPPKALHFFIWAHQNGFSHSHQSYLLMLQILCQSRNLNAARNFLFSIEKKSNG 2
R IK P KALHFF W + GFSH+HQSY LMLQ+L +RNLN+ARNFLFSI +S G
Sbjct: 122 RFIKKPSKALHFFTWTQKLGFSHTHQSYFLMLQLLGNARNLNSARNFLFSIPTRSKG 178