BLASTX nr result

ID: Panax24_contig00011798 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00011798
         (359 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN04966.1 hypothetical protein DCAR_005803 [Daucus carota subsp...    44   5e-06
XP_017235012.1 PREDICTED: translocase of chloroplast 159, chloro...    44   5e-06
XP_017235013.1 PREDICTED: translocase of chloroplast 159, chloro...    44   5e-06

>KZN04966.1 hypothetical protein DCAR_005803 [Daucus carota subsp. sativus]
          Length = 1492

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = -1

Query: 155 VSAQDDILENGISGKSIVQESDEPSSIQNQELITEVEDEMNIDNEEASDGE 3
           +S QD+I ENG+S KS+  +S E + +QN+E+  EV+D+ N    E S+ +
Sbjct: 592 LSVQDEITENGVSEKSLANDSAESNPLQNKEI--EVKDDANFVKNETSEDD 640



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 358 VEENGEAAGFVEHIQENEKKPETQVVEVDNEAKQNGSAVGVEVISTRDLVCPEGFD 191
           +EE+G+A   V + QENEK+   Q+              GVEV+STR+ V  +G D
Sbjct: 523 IEEDGQADANVGNNQENEKEHVNQIE-------------GVEVVSTRNFVGDDGSD 565


>XP_017235012.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           isoform X1 [Daucus carota subsp. sativus]
          Length = 1478

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = -1

Query: 155 VSAQDDILENGISGKSIVQESDEPSSIQNQELITEVEDEMNIDNEEASDGE 3
           +S QD+I ENG+S KS+  +S E + +QN+E+  EV+D+ N    E S+ +
Sbjct: 566 LSVQDEITENGVSEKSLANDSAESNPLQNKEI--EVKDDANFVKNETSEDD 614



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 358 VEENGEAAGFVEHIQENEKKPETQVVEVDNEAKQNGSAVGVEVISTRDLVCPEGFD 191
           +EE+G+A   V + QENEK+   Q+              GVEV+STR+ V  +G D
Sbjct: 497 IEEDGQADANVGNNQENEKEHVNQIE-------------GVEVVSTRNFVGDDGSD 539


>XP_017235013.1 PREDICTED: translocase of chloroplast 159, chloroplastic-like
           isoform X2 [Daucus carota subsp. sativus]
          Length = 1400

 Score = 43.9 bits (102), Expect(2) = 5e-06
 Identities = 21/51 (41%), Positives = 34/51 (66%)
 Frame = -1

Query: 155 VSAQDDILENGISGKSIVQESDEPSSIQNQELITEVEDEMNIDNEEASDGE 3
           +S QD+I ENG+S KS+  +S E + +QN+E+  EV+D+ N    E S+ +
Sbjct: 488 LSVQDEITENGVSEKSLANDSAESNPLQNKEI--EVKDDANFVKNETSEDD 536



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -2

Query: 358 VEENGEAAGFVEHIQENEKKPETQVVEVDNEAKQNGSAVGVEVISTRDLVCPEGFD 191
           +EE+G+A   V + QENEK+   Q+              GVEV+STR+ V  +G D
Sbjct: 419 IEEDGQADANVGNNQENEKEHVNQIE-------------GVEVVSTRNFVGDDGSD 461


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