BLASTX nr result
ID: Panax24_contig00011555
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00011555
(484 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017247629.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 89 2e-17
XP_017247628.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 84 5e-16
KZM97483.1 hypothetical protein DCAR_015155 [Daucus carota subsp... 71 3e-11
CBI15506.3 unnamed protein product, partial [Vitis vinifera] 64 6e-09
XP_002279968.2 PREDICTED: nuclear poly(A) polymerase 1 [Vitis vi... 64 6e-09
XP_009360118.1 PREDICTED: nuclear poly(A) polymerase 1-like [Pyr... 63 2e-08
GAV62347.1 PAP_RNA-bind domain-containing protein/PAP_central do... 61 5e-08
EOY21150.1 Poly(A) polymerase 1 isoform 3 [Theobroma cacao] 60 1e-07
XP_015578274.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 60 1e-07
CDO98397.1 unnamed protein product [Coffea canephora] 60 1e-07
XP_015578273.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 60 1e-07
EOY21148.1 Poly(A) polymerase 1 isoform 1 [Theobroma cacao] EOY2... 60 1e-07
XP_017973478.1 PREDICTED: nuclear poly(A) polymerase 1 [Theobrom... 60 1e-07
OMO51574.1 hypothetical protein CCACVL1_29711, partial [Corchoru... 59 2e-07
XP_008240215.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 59 3e-07
XP_008240214.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 59 3e-07
OMP09977.1 hypothetical protein COLO4_04946 [Corchorus olitorius] 59 3e-07
XP_012075422.1 PREDICTED: nuclear poly(A) polymerase 1-like [Jat... 59 4e-07
XP_018807815.1 PREDICTED: nuclear poly(A) polymerase 1-like [Jug... 59 4e-07
XP_002322074.2 hypothetical protein POPTR_0015s04100g [Populus t... 59 5e-07
>XP_017247629.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Daucus carota
subsp. sativus]
Length = 733
Score = 88.6 bits (218), Expect = 2e-17
Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEAT-ELP 231
QY+DQ N LGK + G + E GA VV+V T+N A ++P+FPFNG LEELEAT EL
Sbjct: 642 QYEDQANILGKVVSRGCGQST--ENGAEVVTVMTSNGACVNPHFPFNGSLEELEATDELS 699
Query: 232 VPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKS 330
VP S+ + S S VQ +P+IRL+ +S+AKA+G S
Sbjct: 700 VPSSTGLSSMSAVQRKPVIRLNLTSMAKATGTS 732
>XP_017247628.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Daucus carota
subsp. sativus]
Length = 734
Score = 84.3 bits (207), Expect = 5e-16
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELE--ATEL 228
QY+DQ N LGK + G + E GA VV+V T+N A ++P+FPFNG LEELE EL
Sbjct: 642 QYEDQANILGKVVSRGCGQST--ENGAEVVTVMTSNGACVNPHFPFNGSLEELEKATDEL 699
Query: 229 PVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKS 330
VP S+ + S S VQ +P+IRL+ +S+AKA+G S
Sbjct: 700 SVPSSTGLSSMSAVQRKPVIRLNLTSMAKATGTS 733
>KZM97483.1 hypothetical protein DCAR_015155 [Daucus carota subsp. sativus]
Length = 721
Score = 70.9 bits (172), Expect = 3e-11
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELE--ATEL 228
QY+DQ N LGK + G + E GA VV+V T+N A ++P+FPFNG LEELE EL
Sbjct: 581 QYEDQANILGKVVSRGCGQST--ENGAEVVTVMTSNGACVNPHFPFNGSLEELEKATDEL 638
Query: 229 PVPFSSDIHSTSTVQTRPIIR 291
VP S+ + S S VQ +P+IR
Sbjct: 639 SVPSSTGLSSMSAVQRKPVIR 659
>CBI15506.3 unnamed protein product, partial [Vitis vinifera]
Length = 651
Score = 63.9 bits (154), Expect = 6e-09
Identities = 47/114 (41%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 PYGS-QLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PY S Q FP +YK+Q+ + S G + S A V +G
Sbjct: 542 PYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSK----ANVAEEPLTTTSGTV 597
Query: 178 P--YFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
P NGGLEELE EL P S +ST Q +PIIRLSF+SLAKA+GKST
Sbjct: 598 PCTILSPNGGLEELEPAELMPPLSYGNRPSSTEQKKPIIRLSFTSLAKATGKST 651
>XP_002279968.2 PREDICTED: nuclear poly(A) polymerase 1 [Vitis vinifera]
Length = 757
Score = 63.9 bits (154), Expect = 6e-09
Identities = 47/114 (41%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 PYGS-QLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PY S Q FP +YK+Q+ + S G + S A V +G
Sbjct: 648 PYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSK----ANVAEEPLTTTSGTV 703
Query: 178 P--YFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
P NGGLEELE EL P S +ST Q +PIIRLSF+SLAKA+GKST
Sbjct: 704 PCTILSPNGGLEELEPAELMPPLSYGNRPSSTEQKKPIIRLSFTSLAKATGKST 757
>XP_009360118.1 PREDICTED: nuclear poly(A) polymerase 1-like [Pyrus x
bretschneideri]
Length = 785
Score = 62.8 bits (151), Expect = 2e-08
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVAT-NNRAGIHPYFPFNGGLEELEATELP 231
+Y+ Q+ + S N GS E+ A+V ++ +N AG +NGG EELE EL
Sbjct: 695 EYRHQVKD--SSGNMKGSQMEASEESASVATLVNYSNGAGTSTDL-YNGGSEELEVAELM 751
Query: 232 VPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
PFS+ S Q +PIIRL+F+SLAKA+GKS+
Sbjct: 752 APFSNGTPSRPVAQRKPIIRLNFTSLAKAAGKSS 785
>GAV62347.1 PAP_RNA-bind domain-containing protein/PAP_central
domain-containing protein [Cephalotus follicularis]
Length = 608
Score = 61.2 bits (147), Expect = 5e-08
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +1
Query: 133 AAVVSVATNNRAGIHPYFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLA 312
A V + G++P NGG+EELE+TEL VP+S+ I S Q +P+IRL+F+SLA
Sbjct: 546 AETVCRGAGSSTGLYP----NGGIEELESTELMVPYSNVIPSAPVAQRKPLIRLNFTSLA 601
Query: 313 KASGKS 330
K +GKS
Sbjct: 602 KGTGKS 607
>EOY21150.1 Poly(A) polymerase 1 isoform 3 [Theobroma cacao]
Length = 631
Score = 60.5 bits (145), Expect = 1e-07
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 PYGS-QLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PYG+ Q FP ++++Q+ ++ + +G V S A V ++N AG
Sbjct: 522 PYGAHQAFPQELEELEDDLEFRNQVRSVENTKSG--PVESSMSDLAGAAPVTSSNGAGPS 579
Query: 178 PYFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKS 330
+GG+EELE EL S+ I S Q +P+IRL+F+SL KAS KS
Sbjct: 580 TSLHASGGIEELEPAELTAMISNRIPSAPVAQRKPLIRLNFTSLGKASEKS 630
>XP_015578274.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Ricinus
communis]
Length = 736
Score = 60.5 bits (145), Expect = 1e-07
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 61 KDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVPF 240
KD ++ +S + + ++LP A +++N P NGGLEELE EL PF
Sbjct: 646 KDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCP-NGGLEELEPAELVAPF 704
Query: 241 SSDIHSTSTV-QTRPIIRLSFSSLAKASGKST 333
S I S + V Q +P+IRLSF+SL KA+G+ST
Sbjct: 705 FSGISSAAPVAQRKPLIRLSFTSLGKANGRST 736
>CDO98397.1 unnamed protein product [Coffea canephora]
Length = 754
Score = 60.5 bits (145), Expect = 1e-07
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 PY-GSQLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PY Q FP +YK+Q G S G S+ S KG+ +VS+ T+ AG
Sbjct: 644 PYVAHQTFPQELDELEDDPEYKNQGKITGGSVKGS-SMESSATKGSLIVSLTTSTAAGSC 702
Query: 178 PYFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
+G LEELE EL +P +S ++S +T +P++R +F+SLAKA+G+ST
Sbjct: 703 SSLQSSGKLEELEPPEL-LPPASRLNS-ATSAPKPVLRFNFTSLAKATGEST 752
>XP_015578273.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Ricinus
communis]
Length = 762
Score = 60.5 bits (145), Expect = 1e-07
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 61 KDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVPF 240
KD ++ +S + + ++LP A +++N P NGGLEELE EL PF
Sbjct: 672 KDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCP-NGGLEELEPAELVAPF 730
Query: 241 SSDIHSTSTV-QTRPIIRLSFSSLAKASGKST 333
S I S + V Q +P+IRLSF+SL KA+G+ST
Sbjct: 731 FSGISSAAPVAQRKPLIRLSFTSLGKANGRST 762
>EOY21148.1 Poly(A) polymerase 1 isoform 1 [Theobroma cacao] EOY21149.1 Poly(A)
polymerase 1 isoform 1 [Theobroma cacao]
Length = 762
Score = 60.5 bits (145), Expect = 1e-07
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 PYGS-QLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PYG+ Q FP ++++Q+ ++ + +G V S A V ++N AG
Sbjct: 653 PYGAHQAFPQELEELEDDLEFRNQVRSVENTKSG--PVESSMSDLAGAAPVTSSNGAGPS 710
Query: 178 PYFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKS 330
+GG+EELE EL S+ I S Q +P+IRL+F+SL KAS KS
Sbjct: 711 TSLHASGGIEELEPAELTAMISNRIPSAPVAQRKPLIRLNFTSLGKASEKS 761
>XP_017973478.1 PREDICTED: nuclear poly(A) polymerase 1 [Theobroma cacao]
Length = 762
Score = 60.1 bits (144), Expect = 1e-07
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Frame = +1
Query: 1 PYGS-QLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PYG+ Q FP ++++Q+ ++ + +G V S A V ++N AG
Sbjct: 653 PYGAHQAFPQELEELEDDLEFRNQVRSVENTKSG--PVESSMSDLAGAAPVPSSNGAGPS 710
Query: 178 PYFPFNGGLEELEATELPVPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKS 330
+GG+EELE EL S+ I S Q +P+IRL+F+SL KAS KS
Sbjct: 711 TSLHASGGIEELEPAELTAMISNRIPSAPVAQRKPLIRLNFTSLGKASEKS 761
>OMO51574.1 hypothetical protein CCACVL1_29711, partial [Corchorus capsularis]
Length = 421
Score = 59.3 bits (142), Expect = 2e-07
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 103 GSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVPFSSDIHSTSTV-QTR 279
G V S A V+++N AG NGG+EELE EL VP ++ I S + V Q +
Sbjct: 344 GPVESSMSDSAGAAPVSSSNGAGPSTGLHANGGIEELEPAELTVPIANRIPSAAPVAQRK 403
Query: 280 PIIRLSFSSLAKASGKS 330
P+IRLSF+SL KAS KS
Sbjct: 404 PLIRLSFTSLGKASEKS 420
>XP_008240215.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Prunus mume]
Length = 655
Score = 59.3 bits (142), Expect = 3e-07
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFP-FNGGLEELEATELP 231
+Y+ Q+ + ++ S + P + + VS N+ G P +NGGLEELE EL
Sbjct: 565 EYRHQVKDFSRNMK---SSQMEPSEESVSVSARVNSSNGAGPSTDSYNGGLEELEPAELM 621
Query: 232 VPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
VP S+ I Q + IIRL+F+SLAKA+GKS+
Sbjct: 622 VPSSNGIPPEPVAQKKSIIRLNFTSLAKAAGKSS 655
>XP_008240214.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Prunus mume]
Length = 755
Score = 59.3 bits (142), Expect = 3e-07
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFP-FNGGLEELEATELP 231
+Y+ Q+ + ++ S + P + + VS N+ G P +NGGLEELE EL
Sbjct: 665 EYRHQVKDFSRNMK---SSQMEPSEESVSVSARVNSSNGAGPSTDSYNGGLEELEPAELM 721
Query: 232 VPFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
VP S+ I Q + IIRL+F+SLAKA+GKS+
Sbjct: 722 VPSSNGIPPEPVAQKKSIIRLNFTSLAKAAGKSS 755
>OMP09977.1 hypothetical protein COLO4_04946 [Corchorus olitorius]
Length = 766
Score = 59.3 bits (142), Expect = 3e-07
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Frame = +1
Query: 1 PYGS-QLFPXXXXXXXXXXQYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIH 177
PYG+ Q + ++Q+ ++G + G V S A V+++N AG
Sbjct: 656 PYGAHQAITQELEELEDDLEVRNQVRSVGNTK--AGPVESSMSDSAGAAPVSSSNGAGPS 713
Query: 178 PYFPFNGGLEELEATELPVPFSSDIHSTSTV-QTRPIIRLSFSSLAKASGKS 330
NGG+EELE EL VP ++ I S + + Q +P+IRLSF+SL KAS KS
Sbjct: 714 IGLHANGGIEELEPAELIVPITNRIPSAAPLAQRKPLIRLSFTSLGKASEKS 765
>XP_012075422.1 PREDICTED: nuclear poly(A) polymerase 1-like [Jatropha curcas]
KDP35158.1 hypothetical protein JCGZ_10692 [Jatropha
curcas]
Length = 754
Score = 58.9 bits (141), Expect = 4e-07
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGA---AVVSVATNNRAGIHPYFPFNGGLEELEATE 225
Q KD + N + S K A V + + NR+G F NGGLEELE E
Sbjct: 658 QVKDSVGNTKEGSVESSSTGMTAAKLANAPIAVPIISGNRSGSFISFSTNGGLEELELAE 717
Query: 226 LPVPFSSDIHSTSTV-QTRPIIRLSFSSLAKASGKST 333
L ++ + S ++V Q +P+IRLSF+ L KASGKST
Sbjct: 718 LETLLANGVSSAASVPQKKPLIRLSFNFLGKASGKST 754
>XP_018807815.1 PREDICTED: nuclear poly(A) polymerase 1-like [Juglans regia]
Length = 764
Score = 58.9 bits (141), Expect = 4e-07
Identities = 35/93 (37%), Positives = 53/93 (56%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNGGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPV 234
+Y+DQ + + GG V S A V V ++N + NG LEELE TEL
Sbjct: 674 EYRDQDKGI-RGNIKGGPVESSSANAAVAVQVTSSNGSASSGDVYSNGNLEELEPTELVA 732
Query: 235 PFSSDIHSTSTVQTRPIIRLSFSSLAKASGKST 333
P S++ +Q++P+IR+SF+SL KA+GK++
Sbjct: 733 PL-SNVTPAPAIQSKPLIRMSFTSLPKATGKTS 764
>XP_002322074.2 hypothetical protein POPTR_0015s04100g [Populus trichocarpa]
EEF06201.2 hypothetical protein POPTR_0015s04100g
[Populus trichocarpa]
Length = 780
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 115 SLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVPFSSDIHSTSTV-QTRPIIR 291
++ + ++ +VA +N AG Y NGG EELE EL P + I S V Q +P+IR
Sbjct: 707 AVEQTNESIAAVACSNGAGPSAYLYPNGGSEELEPAELMAPLFNGISSAPPVAQPKPLIR 766
Query: 292 LSFSSLAKASGKST 333
L+F+SL KA+GKST
Sbjct: 767 LNFTSLGKAAGKST 780