BLASTX nr result
ID: Panax24_contig00011554
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00011554
(482 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017247629.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 91 3e-18
XP_017247628.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 87 8e-17
KZM97483.1 hypothetical protein DCAR_015155 [Daucus carota subsp... 73 4e-12
XP_009360118.1 PREDICTED: nuclear poly(A) polymerase 1-like [Pyr... 63 1e-08
XP_012075422.1 PREDICTED: nuclear poly(A) polymerase 1-like [Jat... 63 2e-08
CBI15506.3 unnamed protein product, partial [Vitis vinifera] 60 1e-07
XP_002279968.2 PREDICTED: nuclear poly(A) polymerase 1 [Vitis vi... 60 1e-07
XP_008240215.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 60 2e-07
XP_015578274.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 60 2e-07
XP_008240214.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 60 2e-07
XP_015578273.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X... 60 2e-07
XP_008374793.1 PREDICTED: nuclear poly(A) polymerase 1 [Malus do... 59 3e-07
XP_018500943.1 PREDICTED: nuclear poly(A) polymerase 1-like isof... 59 5e-07
XP_009347604.1 PREDICTED: nuclear poly(A) polymerase 1-like isof... 59 5e-07
GAV62347.1 PAP_RNA-bind domain-containing protein/PAP_central do... 58 6e-07
XP_002322074.2 hypothetical protein POPTR_0015s04100g [Populus t... 58 6e-07
XP_018807815.1 PREDICTED: nuclear poly(A) polymerase 1-like [Jug... 57 1e-06
ONI09248.1 hypothetical protein PRUPE_5G226600 [Prunus persica] 57 2e-06
XP_007210342.1 hypothetical protein PRUPE_ppa001856mg [Prunus pe... 57 2e-06
ONI09250.1 hypothetical protein PRUPE_5G226600 [Prunus persica] 57 2e-06
>XP_017247629.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Daucus carota
subsp. sativus]
Length = 733
Score = 90.9 bits (224), Expect = 3e-18
Identities = 51/93 (54%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEAT-ELP 231
QY+DQ N LGK +RG + E GA VV+V T+N A ++P+FPFNG LEELEAT EL
Sbjct: 642 QYEDQANILGKVVSRGCGQST--ENGAEVVTVMTSNGACVNPHFPFNGSLEELEATDELS 699
Query: 232 VQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKS 330
V S+G+ S S VQ +P+IRL+ +S+AKA+G S
Sbjct: 700 VPSSTGLSSMSAVQRKPVIRLNLTSMAKATGTS 732
>XP_017247628.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Daucus carota
subsp. sativus]
Length = 734
Score = 86.7 bits (213), Expect = 8e-17
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELE--ATEL 228
QY+DQ N LGK +RG + E GA VV+V T+N A ++P+FPFNG LEELE EL
Sbjct: 642 QYEDQANILGKVVSRGCGQST--ENGAEVVTVMTSNGACVNPHFPFNGSLEELEKATDEL 699
Query: 229 PVQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKS 330
V S+G+ S S VQ +P+IRL+ +S+AKA+G S
Sbjct: 700 SVPSSTGLSSMSAVQRKPVIRLNLTSMAKATGTS 733
>KZM97483.1 hypothetical protein DCAR_015155 [Daucus carota subsp. sativus]
Length = 721
Score = 73.2 bits (178), Expect = 4e-12
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELE--ATEL 228
QY+DQ N LGK +RG + E GA VV+V T+N A ++P+FPFNG LEELE EL
Sbjct: 581 QYEDQANILGKVVSRGCGQST--ENGAEVVTVMTSNGACVNPHFPFNGSLEELEKATDEL 638
Query: 229 PVQFSSGIHSTSTVQTRPIIR 291
V S+G+ S S VQ +P+IR
Sbjct: 639 SVPSSTGLSSMSAVQRKPVIR 659
>XP_009360118.1 PREDICTED: nuclear poly(A) polymerase 1-like [Pyrus x
bretschneideri]
Length = 785
Score = 63.2 bits (152), Expect = 1e-08
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVAT-NNRAGIHPYFPFNGGLEELEATELP 231
+Y+ Q+ + S N GS E+ A+V ++ +N AG +NGG EELE EL
Sbjct: 695 EYRHQVKD--SSGNMKGSQMEASEESASVATLVNYSNGAGTSTDL-YNGGSEELEVAELM 751
Query: 232 VQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
FS+G S Q +PIIRL+F+SLAKA+GKS+
Sbjct: 752 APFSNGTPSRPVAQRKPIIRLNFTSLAKAAGKSS 785
>XP_012075422.1 PREDICTED: nuclear poly(A) polymerase 1-like [Jatropha curcas]
KDP35158.1 hypothetical protein JCGZ_10692 [Jatropha
curcas]
Length = 754
Score = 62.8 bits (151), Expect = 2e-08
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGA---AVVSVATNNRAGIHPYFPFNGGLEELEATE 225
Q KD + N + S K A V + + NR+G F NGGLEELE E
Sbjct: 658 QVKDSVGNTKEGSVESSSTGMTAAKLANAPIAVPIISGNRSGSFISFSTNGGLEELELAE 717
Query: 226 LPVQFSSGIHSTSTV-QTRPIIRLSFSSLAKASGKST 333
L ++G+ S ++V Q +P+IRLSF+ L KASGKST
Sbjct: 718 LETLLANGVSSAASVPQKKPLIRLSFNFLGKASGKST 754
>CBI15506.3 unnamed protein product, partial [Vitis vinifera]
Length = 651
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/93 (44%), Positives = 51/93 (54%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPV 234
+YK+Q+ + S +G S S A T+ P NGGLEELE EL
Sbjct: 561 EYKNQVKDFTGS-TKGSSAESSKANVAEEPLTTTSGTVPCTILSP-NGGLEELEPAELMP 618
Query: 235 QFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
S G +ST Q +PIIRLSF+SLAKA+GKST
Sbjct: 619 PLSYGNRPSSTEQKKPIIRLSFTSLAKATGKST 651
>XP_002279968.2 PREDICTED: nuclear poly(A) polymerase 1 [Vitis vinifera]
Length = 757
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/93 (44%), Positives = 51/93 (54%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPV 234
+YK+Q+ + S +G S S A T+ P NGGLEELE EL
Sbjct: 667 EYKNQVKDFTGS-TKGSSAESSKANVAEEPLTTTSGTVPCTILSP-NGGLEELEPAELMP 724
Query: 235 QFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
S G +ST Q +PIIRLSF+SLAKA+GKST
Sbjct: 725 PLSYGNRPSSTEQKKPIIRLSFTSLAKATGKST 757
>XP_008240215.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Prunus mume]
Length = 655
Score = 59.7 bits (143), Expect = 2e-07
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 PYGSQXXXXXXXXXXXXXQYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHP 180
PY S +Y+ Q+ + ++ S + P + + VS N+ G P
Sbjct: 547 PYVSHQAFPELDELEDDSEYRHQVKDFSRNMK---SSQMEPSEESVSVSARVNSSNGAGP 603
Query: 181 YFP-FNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
+NGGLEELE EL V S+GI Q + IIRL+F+SLAKA+GKS+
Sbjct: 604 STDSYNGGLEELEPAELMVPSSNGIPPEPVAQKKSIIRLNFTSLAKAAGKSS 655
>XP_015578274.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X2 [Ricinus
communis]
Length = 736
Score = 59.7 bits (143), Expect = 2e-07
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 61 KDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVQF 240
KD ++ +S + + ++LP A +++N P NGGLEELE EL F
Sbjct: 646 KDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCP-NGGLEELEPAELVAPF 704
Query: 241 SSGIHSTSTV-QTRPIIRLSFSSLAKASGKST 333
SGI S + V Q +P+IRLSF+SL KA+G+ST
Sbjct: 705 FSGISSAAPVAQRKPLIRLSFTSLGKANGRST 736
>XP_008240214.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Prunus mume]
Length = 755
Score = 59.7 bits (143), Expect = 2e-07
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 PYGSQXXXXXXXXXXXXXQYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHP 180
PY S +Y+ Q+ + ++ S + P + + VS N+ G P
Sbjct: 647 PYVSHQAFPELDELEDDSEYRHQVKDFSRNMK---SSQMEPSEESVSVSARVNSSNGAGP 703
Query: 181 YFP-FNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
+NGGLEELE EL V S+GI Q + IIRL+F+SLAKA+GKS+
Sbjct: 704 STDSYNGGLEELEPAELMVPSSNGIPPEPVAQKKSIIRLNFTSLAKAAGKSS 755
>XP_015578273.1 PREDICTED: nuclear poly(A) polymerase 1 isoform X1 [Ricinus
communis]
Length = 762
Score = 59.7 bits (143), Expect = 2e-07
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +1
Query: 61 KDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVQF 240
KD ++ +S + + ++LP A +++N P NGGLEELE EL F
Sbjct: 672 KDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCP-NGGLEELEPAELVAPF 730
Query: 241 SSGIHSTSTV-QTRPIIRLSFSSLAKASGKST 333
SGI S + V Q +P+IRLSF+SL KA+G+ST
Sbjct: 731 FSGISSAAPVAQRKPLIRLSFTSLGKANGRST 762
>XP_008374793.1 PREDICTED: nuclear poly(A) polymerase 1 [Malus domestica]
Length = 784
Score = 58.9 bits (141), Expect = 3e-07
Identities = 38/93 (40%), Positives = 51/93 (54%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPV 234
Q KD N+ +G + +L E + V +N AG +NGGLEELE EL
Sbjct: 698 QVKDFSGNM-----KGSRLEALEESVSIATPVNYSNGAGPSTDL-YNGGLEELEPAELMA 751
Query: 235 QFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
S+G S Q +PIIRL+F+SLAK +GKS+
Sbjct: 752 PLSNGTPSLPVAQRKPIIRLNFTSLAKPAGKSS 784
>XP_018500943.1 PREDICTED: nuclear poly(A) polymerase 1-like isoform X2 [Pyrus x
bretschneideri]
Length = 748
Score = 58.5 bits (140), Expect = 5e-07
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +1
Query: 1 PYGSQXXXXXXXXXXXXXQYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHP 180
PY S +Y+ + +L + +G + + E + V +N AG
Sbjct: 640 PYVSHQALREVDELEDDLEYRHLVKDLSGNM-KGSQMEASKESVSVATPVNYSNGAGPST 698
Query: 181 YFPFNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
+NGGLEELE EL S+G S Q +PIIRL+F+SLAKA+GKS+
Sbjct: 699 DL-YNGGLEELEPAELMAPLSNGTPSPPVAQRKPIIRLNFTSLAKAAGKSS 748
>XP_009347604.1 PREDICTED: nuclear poly(A) polymerase 1-like isoform X1 [Pyrus x
bretschneideri]
Length = 785
Score = 58.5 bits (140), Expect = 5e-07
Identities = 39/111 (35%), Positives = 56/111 (50%)
Frame = +1
Query: 1 PYGSQXXXXXXXXXXXXXQYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHP 180
PY S +Y+ + +L + +G + + E + V +N AG
Sbjct: 677 PYVSHQALREVDELEDDLEYRHLVKDLSGNM-KGSQMEASKESVSVATPVNYSNGAGPST 735
Query: 181 YFPFNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
+NGGLEELE EL S+G S Q +PIIRL+F+SLAKA+GKS+
Sbjct: 736 DL-YNGGLEELEPAELMAPLSNGTPSPPVAQRKPIIRLNFTSLAKAAGKSS 785
>GAV62347.1 PAP_RNA-bind domain-containing protein/PAP_central
domain-containing protein [Cephalotus follicularis]
Length = 608
Score = 58.2 bits (139), Expect = 6e-07
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 133 AAVVSVATNNRAGIHPYFPFNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLSFSSLA 312
A V + G++P NGG+EELE+TEL V +S+ I S Q +P+IRL+F+SLA
Sbjct: 546 AETVCRGAGSSTGLYP----NGGIEELESTELMVPYSNVIPSAPVAQRKPLIRLNFTSLA 601
Query: 313 KASGKS 330
K +GKS
Sbjct: 602 KGTGKS 607
>XP_002322074.2 hypothetical protein POPTR_0015s04100g [Populus trichocarpa]
EEF06201.2 hypothetical protein POPTR_0015s04100g
[Populus trichocarpa]
Length = 780
Score = 58.2 bits (139), Expect = 6e-07
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 115 SLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPVQFSSGIHSTSTV-QTRPIIR 291
++ + ++ +VA +N AG Y NGG EELE EL +GI S V Q +P+IR
Sbjct: 707 AVEQTNESIAAVACSNGAGPSAYLYPNGGSEELEPAELMAPLFNGISSAPPVAQPKPLIR 766
Query: 292 LSFSSLAKASGKST 333
L+F+SL KA+GKST
Sbjct: 767 LNFTSLGKAAGKST 780
>XP_018807815.1 PREDICTED: nuclear poly(A) polymerase 1-like [Juglans regia]
Length = 764
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +1
Query: 55 QYKDQMNNLGKSPNRGGSVRSLPEKGAAVVSVATNNRAGIHPYFPFNGGLEELEATELPV 234
+Y+DQ + + +GG V S A V V ++N + NG LEELE TEL
Sbjct: 674 EYRDQDKGI-RGNIKGGPVESSSANAAVAVQVTSSNGSASSGDVYSNGNLEELEPTELVA 732
Query: 235 QFSSGIHSTSTVQTRPIIRLSFSSLAKASGKST 333
S+ + +Q++P+IR+SF+SL KA+GK++
Sbjct: 733 PLSN-VTPAPAIQSKPLIRMSFTSLPKATGKTS 764
>ONI09248.1 hypothetical protein PRUPE_5G226600 [Prunus persica]
Length = 744
Score = 57.0 bits (136), Expect = 2e-06
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 121 PEKGAAVVSVATNNRAGIHPYFP-FNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLS 297
P + + VS N+ G P +NGGLEELE EL V S+G Q + IIRL+
Sbjct: 673 PSEESVSVSAPVNSSNGAGPSTDSYNGGLEELEPAELMVPSSNGTPPEPVAQKKSIIRLN 732
Query: 298 FSSLAKASGKST 333
F+SLAKASGKS+
Sbjct: 733 FTSLAKASGKSS 744
>XP_007210342.1 hypothetical protein PRUPE_ppa001856mg [Prunus persica] ONI09249.1
hypothetical protein PRUPE_5G226600 [Prunus persica]
Length = 755
Score = 57.0 bits (136), Expect = 2e-06
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 121 PEKGAAVVSVATNNRAGIHPYFP-FNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLS 297
P + + VS N+ G P +NGGLEELE EL V S+G Q + IIRL+
Sbjct: 684 PSEESVSVSAPVNSSNGAGPSTDSYNGGLEELEPAELMVPSSNGTPPEPVAQKKSIIRLN 743
Query: 298 FSSLAKASGKST 333
F+SLAKASGKS+
Sbjct: 744 FTSLAKASGKSS 755
>ONI09250.1 hypothetical protein PRUPE_5G226600 [Prunus persica]
Length = 758
Score = 57.0 bits (136), Expect = 2e-06
Identities = 34/72 (47%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 121 PEKGAAVVSVATNNRAGIHPYFP-FNGGLEELEATELPVQFSSGIHSTSTVQTRPIIRLS 297
P + + VS N+ G P +NGGLEELE EL V S+G Q + IIRL+
Sbjct: 687 PSEESVSVSAPVNSSNGAGPSTDSYNGGLEELEPAELMVPSSNGTPPEPVAQKKSIIRLN 746
Query: 298 FSSLAKASGKST 333
F+SLAKASGKS+
Sbjct: 747 FTSLAKASGKSS 758