BLASTX nr result

ID: Panax24_contig00011261 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00011261
         (434 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN10849.1 hypothetical protein DCAR_003505 [Daucus carota subsp...    59   2e-07
XP_017227529.1 PREDICTED: ABC transporter D family member 1 isof...    59   2e-07
XP_017227522.1 PREDICTED: ABC transporter D family member 1 isof...    59   2e-07

>KZN10849.1 hypothetical protein DCAR_003505 [Daucus carota subsp. sativus]
          Length = 1252

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 50/114 (43%), Positives = 58/114 (50%), Gaps = 30/114 (26%)
 Frame = +2

Query: 182 LSLSQKVEWLTC*KMEDAYVANCTEYEINKMKPSETDRQNTAFVVQRA-LHIQRETWHSQ 358
           LSL  +  W    K E++ VA  TE EINKMK SETDRQN A VVQRA + ++R++  S 
Sbjct: 647 LSLDGEGGWSVQYKSENSDVATGTELEINKMKTSETDRQNDAIVVQRAFVDMKRDSAFSN 706

Query: 359 -------------------------I*RPNHTFR----RIAAMAKVRVPTVLDK 433
                                    I R N   R    RIAAMAKV VPTVLDK
Sbjct: 707 TKAQSYLSDLIAASPAADDRNLVPVIPRLNVVPRLLPLRIAAMAKVLVPTVLDK 760


>XP_017227529.1 PREDICTED: ABC transporter D family member 1 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 1339

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 50/114 (43%), Positives = 58/114 (50%), Gaps = 30/114 (26%)
 Frame = +2

Query: 182 LSLSQKVEWLTC*KMEDAYVANCTEYEINKMKPSETDRQNTAFVVQRA-LHIQRETWHSQ 358
           LSL  +  W    K E++ VA  TE EINKMK SETDRQN A VVQRA + ++R++  S 
Sbjct: 647 LSLDGEGGWSVQYKSENSDVATGTELEINKMKTSETDRQNDAIVVQRAFVDMKRDSAFSN 706

Query: 359 -------------------------I*RPNHTFR----RIAAMAKVRVPTVLDK 433
                                    I R N   R    RIAAMAKV VPTVLDK
Sbjct: 707 TKAQSYLSDLIAASPAADDRNLVPVIPRLNVVPRLLPLRIAAMAKVLVPTVLDK 760


>XP_017227522.1 PREDICTED: ABC transporter D family member 1 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 1340

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 50/114 (43%), Positives = 58/114 (50%), Gaps = 30/114 (26%)
 Frame = +2

Query: 182 LSLSQKVEWLTC*KMEDAYVANCTEYEINKMKPSETDRQNTAFVVQRA-LHIQRETWHSQ 358
           LSL  +  W    K E++ VA  TE EINKMK SETDRQN A VVQRA + ++R++  S 
Sbjct: 647 LSLDGEGGWSVQYKSENSDVATGTELEINKMKTSETDRQNDAIVVQRAFVDMKRDSAFSN 706

Query: 359 -------------------------I*RPNHTFR----RIAAMAKVRVPTVLDK 433
                                    I R N   R    RIAAMAKV VPTVLDK
Sbjct: 707 TKAQSYLSDLIAASPAADDRNLVPVIPRLNVVPRLLPLRIAAMAKVLVPTVLDK 760


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