BLASTX nr result

ID: Panax24_contig00010946 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010946
         (564 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017236687.1 PREDICTED: pentatricopeptide repeat-containing pr...    60   2e-07

>XP_017236687.1 PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
           chloroplastic [Daucus carota subsp. sativus]
          Length = 507

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
 Frame = +3

Query: 348 MAFTYGVAYLTRSGLTYSS--PRHRFLAPQFYTKFRI-NSCSRVSTAVSKLNAPNSVVVN 518
           M F  G+ + ++ G + S   P+++ L  +F T+ +  NSCSR+      L   NSVV+N
Sbjct: 1   MGFLAGIDHNSKLGFSNSFYFPQNKLLGARFSTRLKTPNSCSRLLGTFCSLKTHNSVVLN 60

Query: 519 KGKVREFGFLKSVEL 563
           +GKVREFGFLKSVEL
Sbjct: 61  RGKVREFGFLKSVEL 75


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