BLASTX nr result
ID: Panax24_contig00010927
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00010927
(625 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017229446.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 100 4e-21
XP_016452256.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 6e-19
XP_015066422.1 PREDICTED: transcription-repair-coupling factor i... 94 7e-19
XP_006338749.1 PREDICTED: transcription-repair-coupling factor [... 94 7e-19
XP_015066421.1 PREDICTED: transcription-repair-coupling factor i... 94 7e-19
XP_004231740.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 7e-19
XP_016561770.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 7e-19
XP_019052334.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 1e-18
XP_010249344.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 1e-18
XP_009781326.1 PREDICTED: uncharacterized protein LOC104230258 [... 94 1e-18
XP_009593050.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 1e-18
XP_019249106.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 1e-18
XP_015570920.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 1e-18
XP_015570918.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 94 1e-18
OMO85598.1 hypothetical protein CCACVL1_10087 [Corchorus capsula... 94 1e-18
XP_017975078.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 93 2e-18
XP_012483325.1 PREDICTED: uncharacterized protein LOC105798007 i... 92 4e-18
XP_016669870.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 92 4e-18
XP_012483323.1 PREDICTED: uncharacterized protein LOC105798007 i... 92 5e-18
XP_019196595.1 PREDICTED: ATP-dependent DNA helicase At3g02060, ... 92 6e-18
>XP_017229446.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
[Daucus carota subsp. sativus] KZN08416.1 hypothetical
protein DCAR_000962 [Daucus carota subsp. sativus]
Length = 813
Score = 100 bits (250), Expect = 4e-21
Identities = 51/67 (76%), Positives = 55/67 (82%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
MITNMSKKV+K+ITDSMTSD+HRNSL FE+GQIKA LNWIFQCLAELHAS
Sbjct: 747 MITNMSKKVYKMITDSMTSDMHRNSLVFENGQIKAELLLELPKEQLLNWIFQCLAELHAS 806
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 807 LPALIKY 813
>XP_016452256.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic-like
[Nicotiana tabacum]
Length = 435
Score = 94.0 bits (232), Expect = 6e-19
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSD+H+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 369 MKTNMSKKVFKLITDSATSDVHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 428
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 429 LPTLIKY 435
>XP_015066422.1 PREDICTED: transcription-repair-coupling factor isoform X2 [Solanum
pennellii]
Length = 781
Score = 94.4 bits (233), Expect = 7e-19
Identities = 49/67 (73%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSDIH+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 715 MKTNMSKKVFKLITDSATSDIHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 774
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 775 LPTLIKY 781
>XP_006338749.1 PREDICTED: transcription-repair-coupling factor [Solanum tuberosum]
Length = 825
Score = 94.4 bits (233), Expect = 7e-19
Identities = 49/67 (73%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSDIH+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 759 MKTNMSKKVFKLITDSATSDIHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 818
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 819 LPTLIKY 825
>XP_015066421.1 PREDICTED: transcription-repair-coupling factor isoform X1 [Solanum
pennellii]
Length = 826
Score = 94.4 bits (233), Expect = 7e-19
Identities = 49/67 (73%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSDIH+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 760 MKTNMSKKVFKLITDSATSDIHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 819
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 820 LPTLIKY 826
>XP_004231740.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
isoform X1 [Solanum lycopersicum]
Length = 826
Score = 94.4 bits (233), Expect = 7e-19
Identities = 49/67 (73%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSDIH+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 760 MKTNMSKKVFKLITDSATSDIHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 819
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 820 LPTLIKY 826
>XP_016561770.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
[Capsicum annuum]
Length = 827
Score = 94.4 bits (233), Expect = 7e-19
Identities = 49/67 (73%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSDIH+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 761 MKTNMSKKVFKLITDSATSDIHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 820
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 821 LPTLIKY 827
>XP_019052334.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
isoform X2 [Nelumbo nucifera]
Length = 807
Score = 94.0 bits (232), Expect = 1e-18
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNM+KKVFKL+T+SM SD+HRNSL FED Q+KA LNWIFQCLAELHAS
Sbjct: 741 METNMNKKVFKLMTESMASDVHRNSLVFEDNQVKAELLLELPREQLLNWIFQCLAELHAS 800
Query: 445 LPALIKY 425
LPAL+KY
Sbjct: 801 LPALVKY 807
>XP_010249344.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
isoform X1 [Nelumbo nucifera]
Length = 823
Score = 94.0 bits (232), Expect = 1e-18
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNM+KKVFKL+T+SM SD+HRNSL FED Q+KA LNWIFQCLAELHAS
Sbjct: 757 METNMNKKVFKLMTESMASDVHRNSLVFEDNQVKAELLLELPREQLLNWIFQCLAELHAS 816
Query: 445 LPALIKY 425
LPAL+KY
Sbjct: 817 LPALVKY 823
>XP_009781326.1 PREDICTED: uncharacterized protein LOC104230258 [Nicotiana
sylvestris] XP_016495171.1 PREDICTED: ATP-dependent DNA
helicase At3g02060, chloroplastic [Nicotiana tabacum]
Length = 835
Score = 94.0 bits (232), Expect = 1e-18
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSD+H+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 769 MKTNMSKKVFKLITDSATSDVHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 828
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 829 LPTLIKY 835
>XP_009593050.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
[Nicotiana tomentosiformis] XP_018624175.1 PREDICTED:
ATP-dependent DNA helicase At3g02060, chloroplastic
[Nicotiana tomentosiformis]
Length = 835
Score = 94.0 bits (232), Expect = 1e-18
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSD+H+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 769 MKTNMSKKVFKLITDSATSDVHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 828
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 829 LPTLIKY 835
>XP_019249106.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
[Nicotiana attenuata] OIS99873.1 atp-dependent dna
helicase, chloroplastic [Nicotiana attenuata]
Length = 837
Score = 94.0 bits (232), Expect = 1e-18
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSKKVFKLITDS TSD+H+NSL FEDGQIKA LNWIFQCLAEL++S
Sbjct: 771 MKTNMSKKVFKLITDSATSDVHQNSLIFEDGQIKAELLLELPKEQLLNWIFQCLAELYSS 830
Query: 445 LPALIKY 425
LP LIKY
Sbjct: 831 LPTLIKY 837
>XP_015570920.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
isoform X2 [Ricinus communis]
Length = 817
Score = 93.6 bits (231), Expect = 1e-18
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TN+SKKVFKL+ DSMTSD+HRNSL+F+ QIKA LNWIFQCLAELHAS
Sbjct: 751 MKTNLSKKVFKLMIDSMTSDVHRNSLEFDGDQIKAELLLELPREQLLNWIFQCLAELHAS 810
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 811 LPALIKY 817
>XP_015570918.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
isoform X1 [Ricinus communis] XP_015570919.1 PREDICTED:
ATP-dependent DNA helicase At3g02060, chloroplastic
isoform X1 [Ricinus communis]
Length = 825
Score = 93.6 bits (231), Expect = 1e-18
Identities = 47/67 (70%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TN+SKKVFKL+ DSMTSD+HRNSL+F+ QIKA LNWIFQCLAELHAS
Sbjct: 759 MKTNLSKKVFKLMIDSMTSDVHRNSLEFDGDQIKAELLLELPREQLLNWIFQCLAELHAS 818
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 819 LPALIKY 825
>OMO85598.1 hypothetical protein CCACVL1_10087 [Corchorus capsularis]
Length = 834
Score = 93.6 bits (231), Expect = 1e-18
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNMSK+VFKL+TDSMTS+ HRNSL FED +IKA LNWIFQCLAELHAS
Sbjct: 768 METNMSKRVFKLMTDSMTSEAHRNSLLFEDNEIKAELLLELPREQLLNWIFQCLAELHAS 827
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 828 LPALIKY 834
>XP_017975078.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
[Theobroma cacao]
Length = 835
Score = 92.8 bits (229), Expect = 2e-18
Identities = 48/67 (71%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TN+SK+VFKL+TDSMTSD HRNSL FE+ QIKA LNWIFQCLAELHAS
Sbjct: 769 METNISKRVFKLMTDSMTSDAHRNSLLFEEDQIKAELLLELPREQLLNWIFQCLAELHAS 828
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 829 LPALIKY 835
>XP_012483325.1 PREDICTED: uncharacterized protein LOC105798007 isoform X2
[Gossypium raimondii]
Length = 678
Score = 92.0 bits (227), Expect = 4e-18
Identities = 47/67 (70%), Positives = 51/67 (76%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M T MSK+VFKL+TDSM SD+HRNSL FE GQI+A LNWIFQCLAELHAS
Sbjct: 612 METRMSKRVFKLMTDSMISDVHRNSLIFEGGQIRAELLLELPREQLLNWIFQCLAELHAS 671
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 672 LPALIKY 678
>XP_016669870.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic-like
[Gossypium hirsutum]
Length = 738
Score = 92.0 bits (227), Expect = 4e-18
Identities = 47/67 (70%), Positives = 51/67 (76%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M T MSK+VFKL+TDSM SD+HRNSL FE GQI+A LNWIFQCLAELHAS
Sbjct: 672 METRMSKRVFKLMTDSMISDVHRNSLIFEGGQIRAELLLELPREQLLNWIFQCLAELHAS 731
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 732 LPALIKY 738
>XP_012483323.1 PREDICTED: uncharacterized protein LOC105798007 isoform X1
[Gossypium raimondii] KJB33194.1 hypothetical protein
B456_006G000100 [Gossypium raimondii]
Length = 825
Score = 92.0 bits (227), Expect = 5e-18
Identities = 47/67 (70%), Positives = 51/67 (76%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M T MSK+VFKL+TDSM SD+HRNSL FE GQI+A LNWIFQCLAELHAS
Sbjct: 759 METRMSKRVFKLMTDSMISDVHRNSLIFEGGQIRAELLLELPREQLLNWIFQCLAELHAS 818
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 819 LPALIKY 825
>XP_019196595.1 PREDICTED: ATP-dependent DNA helicase At3g02060, chloroplastic
[Ipomoea nil]
Length = 837
Score = 91.7 bits (226), Expect = 6e-18
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = -1
Query: 625 MITNMSKKVFKLITDSMTSDIHRNSLDFEDGQIKAXXXXXXXXXXXLNWIFQCLAELHAS 446
M TNM+K VFKLIT+S+ SD+HRNSL FEDG+IKA LNW+FQCLAEL+AS
Sbjct: 771 MKTNMTKNVFKLITESVASDVHRNSLTFEDGEIKAELLLELPREQLLNWVFQCLAELYAS 830
Query: 445 LPALIKY 425
LPALIKY
Sbjct: 831 LPALIKY 837