BLASTX nr result

ID: Panax24_contig00010747 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010747
         (415 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018848848.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Juglans...    77   1e-13
CBI29964.3 unnamed protein product, partial [Vitis vinifera]           76   2e-13
XP_010653852.1 PREDICTED: pre-mRNA-splicing factor prp12 [Vitis ...    76   2e-13
CAN78747.1 hypothetical protein VITISV_022228 [Vitis vinifera]         75   3e-13
XP_012090856.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Jatroph...    75   4e-13
GAV86134.1 CPSF_A domain-containing protein/MMS1_N domain-contai...    75   4e-13
OAY43074.1 hypothetical protein MANES_08G040000 [Manihot esculenta]    72   7e-12
KZM93802.1 hypothetical protein DCAR_017047 [Daucus carota subsp...    71   9e-12
XP_017252237.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform ...    71   9e-12
XP_017252235.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform ...    71   9e-12
KVI08400.1 Cleavage/polyadenylation specificity factor, A subuni...    71   9e-12
XP_010036534.1 PREDICTED: uncharacterized protein LOC104425527 i...    70   2e-11
KCW48150.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]    70   2e-11
KCW48149.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]    70   2e-11
XP_010557959.1 PREDICTED: pre-mRNA-splicing factor prp12 [Tarena...    70   2e-11
XP_010036533.1 PREDICTED: uncharacterized protein LOC104425527 i...    70   2e-11
XP_008443005.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Cucumis...    70   3e-11
XP_006429954.1 hypothetical protein CICLE_v10011020mg [Citrus cl...    69   4e-11
EEF30789.1 spliceosomal protein sap, putative [Ricinus communis]       69   4e-11
XP_015582355.1 PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing...    69   4e-11

>XP_018848848.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Juglans regia]
          Length = 1381

 Score = 76.6 bits (187), Expect = 1e-13
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAHNIVEVP+SYGFAFLFRVGD LLMDLRDA NPC VY
Sbjct: 271 PLAHNIVEVPYSYGFAFLFRVGDALLMDLRDAQNPCCVY 309


>CBI29964.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1363

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -3

Query: 116 LAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           +AH+IVEVPHSYGFAFLFR+GD LLMDLRDAHNPC VY
Sbjct: 269 VAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVY 306


>XP_010653852.1 PREDICTED: pre-mRNA-splicing factor prp12 [Vitis vinifera]
          Length = 1397

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -3

Query: 116 LAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           +AH+IVEVPHSYGFAFLFR+GD LLMDLRDAHNPC VY
Sbjct: 269 VAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVY 306


>CAN78747.1 hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score = 75.5 bits (184), Expect = 3e-13
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -3

Query: 113 AHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           AH+IVEVPHSYGFAFLFR+GD LLMDLRDAHNPC VY
Sbjct: 311 AHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVY 347


>XP_012090856.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Jatropha curcas]
          Length = 1386

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 32/39 (82%), Positives = 36/39 (92%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           P+AH+I+EVPHS GFAFLFRVGD LLMDLRDAHNPC +Y
Sbjct: 270 PIAHDIIEVPHSNGFAFLFRVGDALLMDLRDAHNPCCIY 308


>GAV86134.1 CPSF_A domain-containing protein/MMS1_N domain-containing protein,
           partial [Cephalotus follicularis]
          Length = 1391

 Score = 75.1 bits (183), Expect = 4e-13
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAH+IVEVPHS GFAFLFRVGDVLLMDLRDA NPC VY
Sbjct: 295 PLAHSIVEVPHSSGFAFLFRVGDVLLMDLRDAENPCCVY 333


>OAY43074.1 hypothetical protein MANES_08G040000 [Manihot esculenta]
          Length = 1386

 Score = 71.6 bits (174), Expect = 7e-12
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           P+AH+I+EVPHS GFAFLFRVGD LLMDLRDAHNP  VY
Sbjct: 270 PIAHDIIEVPHSNGFAFLFRVGDALLMDLRDAHNPSCVY 308


>KZM93802.1 hypothetical protein DCAR_017047 [Daucus carota subsp. sativus]
          Length = 1348

 Score = 71.2 bits (173), Expect = 9e-12
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 116 LAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           LAHNI EVP  YGFAFLFRVGD+LLMDLRDAHNPC V+
Sbjct: 235 LAHNITEVPGLYGFAFLFRVGDILLMDLRDAHNPCCVF 272


>XP_017252237.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform X3 [Daucus carota
           subsp. sativus]
          Length = 1382

 Score = 71.2 bits (173), Expect = 9e-12
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 116 LAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           LAHNI EVP  YGFAFLFRVGD+LLMDLRDAHNPC V+
Sbjct: 270 LAHNITEVPGLYGFAFLFRVGDILLMDLRDAHNPCCVF 307


>XP_017252235.1 PREDICTED: pre-mRNA-splicing factor RSE1 isoform X1 [Daucus carota
           subsp. sativus] XP_017252236.1 PREDICTED:
           pre-mRNA-splicing factor RSE1 isoform X2 [Daucus carota
           subsp. sativus]
          Length = 1383

 Score = 71.2 bits (173), Expect = 9e-12
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 116 LAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           LAHNI EVP  YGFAFLFRVGD+LLMDLRDAHNPC V+
Sbjct: 270 LAHNITEVPGLYGFAFLFRVGDILLMDLRDAHNPCCVF 307


>KVI08400.1 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
           [Cynara cardunculus var. scolymus]
          Length = 1383

 Score = 71.2 bits (173), Expect = 9e-12
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAH+IVEVP+SYGFAFLFRV D LLMDLRDAHNP  VY
Sbjct: 268 PLAHDIVEVPNSYGFAFLFRVSDALLMDLRDAHNPLCVY 306


>XP_010036534.1 PREDICTED: uncharacterized protein LOC104425527 isoform X2
           [Eucalyptus grandis]
          Length = 1165

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAHN++EVPH +GFAFL R+GD+LLMDLRDA NPC VY
Sbjct: 266 PLAHNLIEVPHLHGFAFLMRLGDILLMDLRDACNPCCVY 304


>KCW48150.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]
          Length = 1232

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAHN++EVPH +GFAFL R+GD+LLMDLRDA NPC VY
Sbjct: 165 PLAHNLIEVPHLHGFAFLMRLGDILLMDLRDACNPCCVY 203


>KCW48149.1 hypothetical protein EUGRSUZ_K01882 [Eucalyptus grandis]
          Length = 1283

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAHN++EVPH +GFAFL R+GD+LLMDLRDA NPC VY
Sbjct: 165 PLAHNLIEVPHLHGFAFLMRLGDILLMDLRDACNPCCVY 203


>XP_010557959.1 PREDICTED: pre-mRNA-splicing factor prp12 [Tarenaya hassleriana]
          Length = 1376

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -3

Query: 116 LAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           L+H IVEVPHSYGFAFLFRVGD LLMDLRDA NPC ++
Sbjct: 274 LSHTIVEVPHSYGFAFLFRVGDALLMDLRDAQNPCCLF 311


>XP_010036533.1 PREDICTED: uncharacterized protein LOC104425527 isoform X1
           [Eucalyptus grandis]
          Length = 1384

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAHN++EVPH +GFAFL R+GD+LLMDLRDA NPC VY
Sbjct: 266 PLAHNLIEVPHLHGFAFLMRLGDILLMDLRDACNPCCVY 304


>XP_008443005.1 PREDICTED: pre-mRNA-splicing factor RSE1 [Cucumis melo]
          Length = 1376

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLA+ +VEVP SYGFA LFRVGD LLMDLRDAH+PC VY
Sbjct: 270 PLAYEVVEVPQSYGFALLFRVGDALLMDLRDAHSPCCVY 308


>XP_006429954.1 hypothetical protein CICLE_v10011020mg [Citrus clementina]
           ESR43194.1 hypothetical protein CICLE_v10011020mg
           [Citrus clementina]
          Length = 926

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 119 PLAHNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRVY 3
           PLAH++VEVP SYGFAF+FR+GD LLMDLRD HNP  VY
Sbjct: 277 PLAHSVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVY 315


>EEF30789.1 spliceosomal protein sap, putative [Ricinus communis]
          Length = 1220

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -3

Query: 110 HNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRV 6
           H+IVEVPHS GFAFLFRVGD LLMDLRDAH+PCRV
Sbjct: 273 HDIVEVPHSNGFAFLFRVGDALLMDLRDAHHPCRV 307


>XP_015582355.1 PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RSE1
           [Ricinus communis]
          Length = 1317

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 31/35 (88%), Positives = 33/35 (94%)
 Frame = -3

Query: 110 HNIVEVPHSYGFAFLFRVGDVLLMDLRDAHNPCRV 6
           H+IVEVPHS GFAFLFRVGD LLMDLRDAH+PCRV
Sbjct: 273 HDIVEVPHSNGFAFLFRVGDALLMDLRDAHHPCRV 307


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