BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010625
         (1613 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017215057.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   584   0.0  
KZM89696.1 hypothetical protein DCAR_022941 [Daucus carota subsp...   575   0.0  
XP_019186766.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   574   0.0  
XP_010320443.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   571   0.0  
XP_004238386.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   570   0.0  
XP_016493442.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   570   0.0  
XP_018808134.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   570   0.0  
XP_019244907.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   569   0.0  
XP_009620048.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   568   0.0  
OIT03965.1 rna uridine synthase 2, chloroplastic [Nicotiana atte...   567   0.0  
XP_009798870.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   565   0.0  
XP_015073900.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   564   0.0  
XP_015073899.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   563   0.0  
XP_019244906.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   563   0.0  
XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   561   0.0  
XP_016492071.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   561   0.0  
XP_019244908.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   561   0.0  
XP_016568333.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   558   0.0  
KVI07293.1 Pseudouridine synthase, catalytic domain-containing p...   558   0.0  
XP_016568332.1 PREDICTED: RNA pseudouridine synthase 2, chloropl...   557   0.0  

>XP_017215057.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Daucus carota
            subsp. sativus]
          Length = 431

 Score =  584 bits (1505), Expect = 0.0
 Identities = 303/429 (70%), Positives = 350/429 (81%), Gaps = 10/429 (2%)
 Frame = +2

Query: 65   PRNPRY---TTYRA-WL-VRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSG 229
            P NPRY   T  RA WL +RACS S                 +NYAGV LEESVNS  + 
Sbjct: 20   PGNPRYSACTKSRAPWLLIRACSTS----------------NSNYAGVALEESVNSTTT- 62

Query: 230  KLRIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLK 394
            K+R+D+WISSRI GISRARVQS+IKSGLV+V       VSH +++GD+VSC IS+L+PLK
Sbjct: 63   KVRLDTWISSRIDGISRARVQSTIKSGLVTVNGRIIDKVSHKLKSGDKVSCTISELQPLK 122

Query: 395  AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDIL 574
            A+P+DIPLDI+YEDDH+LVVNKP HMVVHPAPGNA GTLVN ILHHC LP+ASFP  +I 
Sbjct: 123  AQPQDIPLDILYEDDHLLVVNKPPHMVVHPAPGNATGTLVNAILHHCCLPVASFPIMEIP 182

Query: 575  SDAEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAH 754
            SD +DVS+ E ++++ DD+Y E   SGL EASIRPGIVHRLDKGTSGLL+VAKDEH+HAH
Sbjct: 183  SDEDDVSQGEISSYSADDTYLEPSFSGLTEASIRPGIVHRLDKGTSGLLVVAKDEHSHAH 242

Query: 755  LSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAAS 934
            LSEQFKQ T+QRVYISLTCGVP P  GRV+IPI RD NNRIRMAAV GS KCGK RHAAS
Sbjct: 243  LSEQFKQRTVQRVYISLTCGVPFPALGRVNIPISRDLNNRIRMAAVVGSGKCGKTRHAAS 302

Query: 935  RYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRN 1114
            R+RVIEILAGG  ALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKS+ L  LQQ+N
Sbjct: 303  RFRVIEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSLALDRLQQKN 362

Query: 1115 PSSLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEK 1294
             S+L G+LLQL+S LERPCLHALTLGFMHPHT ++V FS LPP DFAEVLS LR+++TEK
Sbjct: 363  SSNLPGKLLQLISNLERPCLHALTLGFMHPHTRKQVHFSCLPPVDFAEVLSVLRSVNTEK 422

Query: 1295 LINMEKAHH 1321
            ++NME+ ++
Sbjct: 423  IMNMEEVYN 431


>KZM89696.1 hypothetical protein DCAR_022941 [Daucus carota subsp. sativus]
          Length = 429

 Score =  575 bits (1483), Expect = 0.0
 Identities = 300/421 (71%), Positives = 343/421 (81%), Gaps = 10/421 (2%)
 Frame = +2

Query: 65   PRNPRY---TTYRA-WL-VRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSG 229
            P NPRY   T  RA WL +RACS S                 +NYAGV LEESVNS  + 
Sbjct: 16   PGNPRYSACTKSRAPWLLIRACSTS----------------NSNYAGVALEESVNSTTT- 58

Query: 230  KLRIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLK 394
            K+R+D+WISSRI GISRARVQS+IKSGLV+V       VSH +++GD+VSC IS+L+PLK
Sbjct: 59   KVRLDTWISSRIDGISRARVQSTIKSGLVTVNGRIIDKVSHKLKSGDKVSCTISELQPLK 118

Query: 395  AEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDIL 574
            A+P+DIPLDI+YEDDH+LVVNKP HMVVHPAPGNA GTLVN ILHHC LP+ASFP  +I 
Sbjct: 119  AQPQDIPLDILYEDDHLLVVNKPPHMVVHPAPGNATGTLVNAILHHCCLPVASFPIMEIP 178

Query: 575  SDAEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAH 754
            SD +DVS+ E ++++ DD+Y E   SGL EASIRPGIVHRLDKGTSGLL+VAKDEH+HAH
Sbjct: 179  SDEDDVSQGEISSYSADDTYLEPSFSGLTEASIRPGIVHRLDKGTSGLLVVAKDEHSHAH 238

Query: 755  LSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAAS 934
            LSEQFKQ T+QRVYISLTCGVP P  GRV+IPI RD NNRIRMAAV GS KCGK RHAAS
Sbjct: 239  LSEQFKQRTVQRVYISLTCGVPFPALGRVNIPISRDLNNRIRMAAVVGSGKCGKTRHAAS 298

Query: 935  RYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRN 1114
            R+RVIEILAGG  ALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKS+ L  LQQ+N
Sbjct: 299  RFRVIEILAGGGCALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSLALDRLQQKN 358

Query: 1115 PSSLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEK 1294
             S+L G+LLQL+S LERPCLHALTLGFMHPHT ++V FS LPP DFAEVLS LR+++TEK
Sbjct: 359  SSNLPGKLLQLISNLERPCLHALTLGFMHPHTRKQVHFSCLPPVDFAEVLSVLRSVNTEK 418

Query: 1295 L 1297
            +
Sbjct: 419  V 419


>XP_019186766.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Ipomoea nil]
          Length = 453

 Score =  574 bits (1480), Expect = 0.0
 Identities = 292/419 (69%), Positives = 343/419 (81%), Gaps = 9/419 (2%)
 Frame = +2

Query: 68   RNPR----YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            R+PR    Y      + RA S SA    +  P  I + +  NY+GV+LEE+V    SGKL
Sbjct: 37   RSPRATASYGRISNLIFRAFSKSA--PSNARPEPIPAHQITNYSGVKLEETVEP-SSGKL 93

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSWISSRI G+SRARVQSSI+SGLV+V       VSH V+ GD+V+C I++L+PL AE
Sbjct: 94   RLDSWISSRIDGVSRARVQSSIRSGLVTVNGRIIDKVSHTVKRGDKVNCTIAELQPLTAE 153

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PED+PLDIVYEDDHVLVVNKPAHMVVHPAPGN  GTLVNGILHHCSLP+ASFP Q++LSD
Sbjct: 154  PEDMPLDIVYEDDHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPVASFPYQEVLSD 213

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             E   + E + F+ +  Y  G  S + EASIRPGIVHRLDKGTSGLL+VAKDE++HAHL+
Sbjct: 214  GEAALDDELSTFSSEQDYVGGDYSAIGEASIRPGIVHRLDKGTSGLLVVAKDEYSHAHLA 273

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+H+I+RVY++LTCGVP+P +GR+DIPIGRD NNR+RMAA++G +K GK RHAASRY
Sbjct: 274  EQFKKHSIKRVYVALTCGVPTPASGRIDIPIGRDPNNRLRMAAISGFSKNGKTRHAASRY 333

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIEILAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSM L+LLQQRNPS
Sbjct: 334  KVIEILAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQQRNPS 393

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKL 1297
              +G+LLQL+SRLERPCLHALTLGF HP TGE V F++LPP DFAEVLS LR ISTEK+
Sbjct: 394  EFHGKLLQLISRLERPCLHALTLGFRHPKTGENVHFTQLPPTDFAEVLSDLRTISTEKV 452


>XP_010320443.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Solanum lycopersicum]
          Length = 431

 Score =  571 bits (1471), Expect = 0.0
 Identities = 286/420 (68%), Positives = 347/420 (82%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+    +   +++ RA +   GDSDS    D    RR+NY+GV+LEE+V+S K+GKL
Sbjct: 13   PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDS-KTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI G+SRARVQSSI+SGLVSV       VSHMV+ GD+V C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F+P+ S +    S + E+S+RPGIVHRLDKGTSGLL+VAK+EH+ A L+
Sbjct: 192  GEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  AGRVDIPIGRDSNNRIRMAA+ G+ K GK+RHA SRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QLVS+++RPCLHALTLGF HP TGE + F+RLPP DFAE+LS LRAI TEK++
Sbjct: 372  MFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAIKTEKVL 431


>XP_004238386.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Solanum lycopersicum]
          Length = 436

 Score =  570 bits (1469), Expect = 0.0
 Identities = 286/419 (68%), Positives = 346/419 (82%), Gaps = 8/419 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+    +   +++ RA +   GDSDS    D    RR+NY+GV+LEE+V+S K+GKL
Sbjct: 13   PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDS-KTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI G+SRARVQSSI+SGLVSV       VSHMV+ GD+V C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F+P+ S +    S + E+S+RPGIVHRLDKGTSGLL+VAK+EH+ A L+
Sbjct: 192  GEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  AGRVDIPIGRDSNNRIRMAA+ G+ K GK+RHA SRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKL 1297
              +G+L QLVS+++RPCLHALTLGF HP TGE + F+RLPP DFAE+LS LRAI TEK+
Sbjct: 372  MFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAIKTEKV 430


>XP_016493442.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
            [Nicotiana tabacum]
          Length = 431

 Score =  570 bits (1468), Expect = 0.0
 Identities = 288/420 (68%), Positives = 345/420 (82%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   ++++RA S   GDSDS    D    RR+NY+GV+LEE+V+ IK+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIIRAFSKFPGDSDSDDSPDEIQSRRSNYSGVKLEETVD-IKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGN  GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLVSGILHHCSLPTISFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S  E N F+ D S +    S + E SIRPGIVHRLDKGTSGLL+VAK E + A+L+
Sbjct: 192  VEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR+AASRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAASRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVL+ LRAISTEK++
Sbjct: 372  RSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLTELRAISTEKVL 431


>XP_018808134.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Juglans regia]
          Length = 446

 Score =  570 bits (1468), Expect = 0.0
 Identities = 290/418 (69%), Positives = 344/418 (82%), Gaps = 5/418 (1%)
 Frame = +2

Query: 56   CFSPRNPRYTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            CFSPRNPR  +    +    S+S+G ++S    +  + RR N+ GV+LE++V S+ SGKL
Sbjct: 25   CFSPRNPRTPSSSLRICFVASSSSGSTNSDEDKEDLAGRRANFGGVQLEDTV-SLNSGKL 83

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSWISSRI GISRARVQSSI+SGLV+V       VSH V+ GD+V+C IS+L+PL+A 
Sbjct: 84   RLDSWISSRIGGISRARVQSSIRSGLVAVNGRVVDKVSHNVKTGDKVNCTISELQPLRAV 143

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIV+ED+HVLVVNKPAHMVVHPAPGNA GTLVNG+LHHCS P+ +F N+++LSD
Sbjct: 144  PEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVNGVLHHCSPPVVAFSNEEVLSD 203

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
            AED+S+ E ++F+   + ++G  S  + ASIRPGIVHRLDKGTSGLL+VAKDEH+HA+LS
Sbjct: 204  AEDISDDELSSFSAGQNPNDGLYSRRSGASIRPGIVHRLDKGTSGLLVVAKDEHSHANLS 263

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK HTIQR+Y+SLT GVPSP AGRV++PIGRD NNRIRMAA+ GSN   +ARHAASRY
Sbjct: 264  EQFKLHTIQRLYVSLTSGVPSPMAGRVEVPIGRDLNNRIRMAAIPGSNISRQARHAASRY 323

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSM L+LL+ R P 
Sbjct: 324  KVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTPP 383

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEK 1294
            S +GQLLQLVSRLERPCLHAL LGFMHPHT E V F   PP DFAE+L +LR I T K
Sbjct: 384  SRHGQLLQLVSRLERPCLHALALGFMHPHTMENVYFQCPPPADFAEILGQLRKIGTVK 441


>XP_019244907.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Nicotiana attenuata]
          Length = 440

 Score =  569 bits (1467), Expect = 0.0
 Identities = 288/425 (67%), Positives = 347/425 (81%), Gaps = 8/425 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   +++VRA S   GDSDS    D    RR+NY+GV+LEE+V+ +K+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIVRAFSKFPGDSDSDDSPDEIQSRRSNYSGVKLEETVD-VKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SF  +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFQGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F  + S      S + E S+RPGIVHRLDKGTSGLL+VAK E + A+L+
Sbjct: 192  VEDTSDDELNLFPANQSPYGVDSSVMREPSVRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR+AASRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAASRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVLS LRAISTEK+ 
Sbjct: 372  RSHGKLSQLISGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAISTEKVT 431

Query: 1301 NMEKA 1315
             + K+
Sbjct: 432  RLHKS 436


>XP_009620048.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 431

 Score =  568 bits (1465), Expect = 0.0
 Identities = 287/420 (68%), Positives = 345/420 (82%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   ++++RA S   GDSDS    D    R++NY+GV+LEE+V+ IK+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIIRAFSKFPGDSDSDDSPDEIQSRKSNYSGVKLEETVD-IKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRIDGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGN  GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNVTGTLVSGILHHCSLPTISFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S  E N F+ D S +    S + E SIRPGIVHRLDKGTSGLL+VAK E + A+L+
Sbjct: 192  VEDASGDELNMFSADQSPNGVDASRMYEPSIRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR+AASRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAASRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVL+ LRAISTEK++
Sbjct: 372  RSHGNLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLTELRAISTEKVL 431


>OIT03965.1 rna uridine synthase 2, chloroplastic [Nicotiana attenuata]
          Length = 431

 Score =  567 bits (1462), Expect = 0.0
 Identities = 287/420 (68%), Positives = 345/420 (82%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   +++VRA S   GDSDS    D    RR+NY+GV+LEE+V+ +K+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIVRAFSKFPGDSDSDDSPDEIQSRRSNYSGVKLEETVD-VKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SF  +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFQGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F  + S      S + E S+RPGIVHRLDKGTSGLL+VAK E + A+L+
Sbjct: 192  VEDTSDDELNLFPANQSPYGVDSSVMREPSVRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR+AASRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRARNAASRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 372  RSHGKLSQLISGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 431


>XP_009798870.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
            sylvestris]
          Length = 431

 Score =  565 bits (1457), Expect = 0.0
 Identities = 287/420 (68%), Positives = 346/420 (82%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   +++ RA S   GDSDS       + RR+NY+GV+LEE+V+ +K+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIFRAFSKFPGDSDSDDSPSEITGRRSNYSGVKLEETVD-VKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F+ D S      S + E S+RPGIVHRLDKGTSGLL+VAK E + A+L+
Sbjct: 192  VEDDSDDELNLFSTDQSPYGVDSSVVCEPSVRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR+AASRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMIAIPGSHKGGRARNAASRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 372  RSHGKLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 431


>XP_015073900.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Solanum pennellii]
          Length = 431

 Score =  564 bits (1454), Expect = 0.0
 Identities = 285/420 (67%), Positives = 345/420 (82%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+    +   +++ RA +   GDSDS    D    RR+NY+GV+LEE+V+S K+GKL
Sbjct: 13   PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDS-KTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI G+SRARVQSSI+SGLV V       VSHMV+ GD+V C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRIDGVSRARVQSSIRSGLVFVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F+   S +    S + E+S+RPGIVHRLDKGTSGLL+VAK+EH+ A L+
Sbjct: 192  GEDASDDELNMFSAYRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  AGRVDIPIGRDSNNRIRMAA+ G+ K GK+RHA SRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGGSSALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGSSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QLVS+++RPCLHALTLGF HP TGE +  +RLPP DFAE+LS LRAI+TEK++
Sbjct: 372  MFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENLHITRLPPPDFAEILSELRAINTEKVL 431


>XP_015073899.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Solanum pennellii]
          Length = 436

 Score =  563 bits (1452), Expect = 0.0
 Identities = 285/419 (68%), Positives = 344/419 (82%), Gaps = 8/419 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+    +   +++ RA +   GDSDS    D    RR+NY+GV+LEE+V+S K+GKL
Sbjct: 13   PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDS-KTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI G+SRARVQSSI+SGLV V       VSHMV+ GD+V C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRIDGVSRARVQSSIRSGLVFVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N F+   S +    S + E+S+RPGIVHRLDKGTSGLL+VAK+EH+ A L+
Sbjct: 192  GEDASDDELNMFSAYRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  AGRVDIPIGRDSNNRIRMAA+ G+ K GK+RHA SRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHAVSRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGGSSALVEWRLETGRTHQIRAHAK+LGIPL+GDEVYGGTK+M L+LLQ + P 
Sbjct: 312  KVIEKLAGGSSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMALSLLQPKTPP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKL 1297
              +G+L QLVS+++RPCLHALTLGF HP TGE +  +RLPP DFAE+LS LRAI+TEK+
Sbjct: 372  MFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENLHITRLPPPDFAEILSELRAINTEKV 430


>XP_019244906.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Nicotiana attenuata]
          Length = 446

 Score =  563 bits (1450), Expect = 0.0
 Identities = 288/431 (66%), Positives = 347/431 (80%), Gaps = 14/431 (3%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   +++VRA S   GDSDS    D    RR+NY+GV+LEE+V+ +K+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIVRAFSKFPGDSDSDDSPDEIQSRRSNYSGVKLEETVD-VKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SF  +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFQGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAK------DEH 742
             ED S+ E N F  + S      S + E S+RPGIVHRLDKGTSGLL+VAK       E 
Sbjct: 192  VEDTSDDELNLFPANQSPYGVDSSVMREPSVRPGIVHRLDKGTSGLLVVAKVVPVLQTEQ 251

Query: 743  THAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKAR 922
            + A+L+EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR
Sbjct: 252  SLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRAR 311

Query: 923  HAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALL 1102
            +AASRY+VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LL
Sbjct: 312  NAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLL 371

Query: 1103 QQRNPSSLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAI 1282
            Q + P   +G+L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVLS LRAI
Sbjct: 372  QPKTPPRSHGKLSQLISGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAI 431

Query: 1283 STEKLINMEKA 1315
            STEK+  + K+
Sbjct: 432  STEKVTRLHKS 442


>XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Vitis vinifera] CBI18920.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 433

 Score =  561 bits (1447), Expect = 0.0
 Identities = 293/417 (70%), Positives = 337/417 (80%), Gaps = 7/417 (1%)
 Frame = +2

Query: 65   PRNPRYTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKS--GKLR 238
            PRNP+  +    ++RACSNS  +     P    S RR NYAGVRLEE+V  + S  GKLR
Sbjct: 24   PRNPKSCSRVFRILRACSNSTDE-----PLVSVSGRRTNYAGVRLEETVVDVNSDSGKLR 78

Query: 239  IDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAEP 403
            +DSWISSRI GISRARVQSSI+SGLVSV       VSH++RAGD+V+C IS+L+PL+AEP
Sbjct: 79   LDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTISELQPLRAEP 138

Query: 404  EDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSDA 583
            EDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GTLVNGILHHCSLP  + PN+D  S+ 
Sbjct: 139  EDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVALPNRD--SEE 196

Query: 584  EDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLSE 763
            +D+S+ EFN+FA   +       G  E +IRPGIVHRLDKGTSGLL+VAKDEH+HAHLSE
Sbjct: 197  DDISDDEFNSFAAGQN------CGTCETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSE 250

Query: 764  QFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRYR 943
            QFK H+I RVYISLT GVP+P +GRV+IP+GRD NNRIRM AV G +  G+ARHAASRY+
Sbjct: 251  QFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYK 310

Query: 944  VIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPSS 1123
            VIEILA G SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LL+ R PSS
Sbjct: 311  VIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSS 370

Query: 1124 LYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEK 1294
             +GQL QLVSRL+RPCLHA+ LGF HP TG+ V FS  PPEDFAE+LS LR ISTEK
Sbjct: 371  HHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKISTEK 427


>XP_016492071.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
            [Nicotiana tabacum]
          Length = 431

 Score =  561 bits (1445), Expect = 0.0
 Identities = 286/420 (68%), Positives = 344/420 (81%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   +++ RA S   GDSDS       + RR+NY+GV+LEE+V+ +K+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIFRAFSKFPGDSDSDDSPGEITGRRSNYSGVKLEETVD-VKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SFP +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S  E N F+ D S      S + E S+RPGIVHRLDKGTSGLL+VAK E + A+L+
Sbjct: 192  VEDDSHDELNLFSTDQSPYGVDSSVVCEPSVRPGIVHRLDKGTSGLLVVAKTEQSLANLA 251

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR+AASRY
Sbjct: 252  EQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMIAIPGSHKGGRARNAASRY 311

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LLQ +   
Sbjct: 312  KVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLQPKTHP 371

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 372  RSHGKLSQLISGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 431


>XP_019244908.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
            [Nicotiana attenuata]
          Length = 437

 Score =  561 bits (1445), Expect = 0.0
 Identities = 287/426 (67%), Positives = 345/426 (80%), Gaps = 14/426 (3%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+   ++   +++VRA S   GDSDS    D    RR+NY+GV+LEE+V+ +K+GKL
Sbjct: 13   PQNPKPFSFSRVSSFIVRAFSKFPGDSDSDDSPDEIQSRRSNYSGVKLEETVD-VKTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+DSW+SSRI GISRARVQSSI+SGLVSV       VSH V+ GD+V+C I+DLKPL+AE
Sbjct: 72   RLDSWVSSRINGISRARVQSSIRSGLVSVNGRVTDKVSHTVKGGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SF  +++LSD
Sbjct: 132  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTVSFQGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAK------DEH 742
             ED S+ E N F  + S      S + E S+RPGIVHRLDKGTSGLL+VAK       E 
Sbjct: 192  VEDTSDDELNLFPANQSPYGVDSSVMREPSVRPGIVHRLDKGTSGLLVVAKVVPVLQTEQ 251

Query: 743  THAHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKAR 922
            + A+L+EQFK+HTI+RVY+S+TCGVP+  +GR+DIPIGRDSNNRIRM A+ GS+K G+AR
Sbjct: 252  SLANLAEQFKKHTIKRVYVSITCGVPTSVSGRIDIPIGRDSNNRIRMVAIPGSHKGGRAR 311

Query: 923  HAASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALL 1102
            +AASRY+VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTK+M L+LL
Sbjct: 312  NAASRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLL 371

Query: 1103 QQRNPSSLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAI 1282
            Q + P   +G+L QL+S +ERPCLHALTLGF HP+TGE + F+RLPP DFAEVLS LRAI
Sbjct: 372  QPKTPPRSHGKLSQLISGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAI 431

Query: 1283 STEKLI 1300
            STEK++
Sbjct: 432  STEKVL 437


>XP_016568333.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
            [Capsicum annuum]
          Length = 424

 Score =  558 bits (1438), Expect = 0.0
 Identities = 286/420 (68%), Positives = 342/420 (81%), Gaps = 8/420 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+    +T+  ++ RA S   GDS+S    D  + RR NY+GV+LEE+V+   +GKL
Sbjct: 13   PQNPKPFSLSTFSTFICRAFSKFPGDSNSDDSPDEITGRRCNYSGVKLEETVDG-NTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+D WISSRI G+SRARVQSSI+SGLVSV       VSH V+AGD+V+C I+DLKPL+AE
Sbjct: 72   RLDCWISSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHKVKAGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SF  +++LSD
Sbjct: 132  PEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTCSFLGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N  +P DS      S + E S+RPGIVHRLDKGTSGLL+VAK+EH+   L+
Sbjct: 192  VEDASDDELN-VSPYDS------SVMCEPSVRPGIVHRLDKGTSGLLVVAKNEHSLVDLA 244

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GRVDIPIGRDSNNRIRMAA+ GS K GK+RHA SRY
Sbjct: 245  EQFKKHTIKRVYVSITCGVPTSVSGRVDIPIGRDSNNRIRMAAIPGSPKSGKSRHAVSRY 304

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPL+GDEVYGGTK+M L+LLQ + P 
Sbjct: 305  KVIEELAGGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQPKTPP 364

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKLI 1300
              +G+L QLVSR+ERPCLHALTLGF HP TGE + F+RLPP DFAE+LS LRAI+TEK++
Sbjct: 365  RFHGKLSQLVSRIERPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAINTEKVL 424


>KVI07293.1 Pseudouridine synthase, catalytic domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 435

 Score =  558 bits (1437), Expect = 0.0
 Identities = 288/420 (68%), Positives = 335/420 (79%), Gaps = 10/420 (2%)
 Frame = +2

Query: 59   FSPRNPRYTT--YRAWLVRACSNSAG-DSDSVGPYDIHS--ERRNNYAGVRLEESVNSIK 223
            F  RNP   T  ++   V  CS +   D +  G  D+ S   RR NY GVRLEESV  +K
Sbjct: 18   FFHRNPPILTPIHQRVSVTFCSGALDFDDEPQGEEDVFSGGRRRTNYTGVRLEESVEELK 77

Query: 224  SGKLRIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKP 388
            SGK+R+D+WIS+RI GISRARVQSSI+SGLVSV        SHMVR GD+V C IS+L+P
Sbjct: 78   SGKIRLDTWISTRINGISRARVQSSIRSGLVSVNNRVTVKASHMVRHGDKVECTISELQP 137

Query: 389  LKAEPEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQD 568
            LKAE EDI LDIVYED+HVLVVNKPAHMVVHPAPGN  GTLVNGILHHCSLP  SF +Q+
Sbjct: 138  LKAEGEDIALDIVYEDEHVLVVNKPAHMVVHPAPGNTTGTLVNGILHHCSLPTPSFQDQE 197

Query: 569  ILSDAEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTH 748
            +LSD++D+ + E +    + + S+ F  G NE S+RPGIVHRLDKGTSGLL+VAKDEH+H
Sbjct: 198  LLSDSDDLDDIELDEPFINQTDSKDFSFGTNETSVRPGIVHRLDKGTSGLLVVAKDEHSH 257

Query: 749  AHLSEQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHA 928
            AHLS+QFKQHTIQR+Y+SLTCGVPSP +GRVDIPIGRD  NRIRM A  G  KCGK+R+A
Sbjct: 258  AHLSQQFKQHTIQRIYVSLTCGVPSPASGRVDIPIGRDLTNRIRMVADTGPTKCGKSRYA 317

Query: 929  ASRYRVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQ 1108
            AS  RV+EILAGG SALVEW+LETGRTHQIRAHAKYLGIPL+GDEVYGGTK+M LA L  
Sbjct: 318  AS--RVVEILAGGGSALVEWKLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALARLHP 375

Query: 1109 RNPSSLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAIST 1288
            +NPSSL+GQL Q+VS+L+RPCLHALTLGF HP TGEK+ FS LPP DFAE+L+ LR IST
Sbjct: 376  KNPSSLHGQLSQIVSKLDRPCLHALTLGFTHPCTGEKMQFSCLPPVDFAELLTGLRNIST 435


>XP_016568332.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
            [Capsicum annuum]
          Length = 429

 Score =  557 bits (1436), Expect = 0.0
 Identities = 286/419 (68%), Positives = 341/419 (81%), Gaps = 8/419 (1%)
 Frame = +2

Query: 65   PRNPR---YTTYRAWLVRACSNSAGDSDSVGPYDIHSERRNNYAGVRLEESVNSIKSGKL 235
            P+NP+    +T+  ++ RA S   GDS+S    D  + RR NY+GV+LEE+V+   +GKL
Sbjct: 13   PQNPKPFSLSTFSTFICRAFSKFPGDSNSDDSPDEITGRRCNYSGVKLEETVDG-NTGKL 71

Query: 236  RIDSWISSRITGISRARVQSSIKSGLVSVXX-----VSHMVRAGDEVSCIISDLKPLKAE 400
            R+D WISSRI G+SRARVQSSI+SGLVSV       VSH V+AGD+V+C I+DLKPL+AE
Sbjct: 72   RLDCWISSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHKVKAGDKVNCTIADLKPLRAE 131

Query: 401  PEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNADGTLVNGILHHCSLPMASFPNQDILSD 580
            PEDIPLDIVYED+HVLVVNKPAHMVVHPAPGNA GTLV+GILHHCSLP  SF  +++LSD
Sbjct: 132  PEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTCSFLGEEVLSD 191

Query: 581  AEDVSEAEFNNFAPDDSYSEGFCSGLNEASIRPGIVHRLDKGTSGLLLVAKDEHTHAHLS 760
             ED S+ E N  +P DS      S + E S+RPGIVHRLDKGTSGLL+VAK+EH+   L+
Sbjct: 192  VEDASDDELN-VSPYDS------SVMCEPSVRPGIVHRLDKGTSGLLVVAKNEHSLVDLA 244

Query: 761  EQFKQHTIQRVYISLTCGVPSPTAGRVDIPIGRDSNNRIRMAAVAGSNKCGKARHAASRY 940
            EQFK+HTI+RVY+S+TCGVP+  +GRVDIPIGRDSNNRIRMAA+ GS K GK+RHA SRY
Sbjct: 245  EQFKKHTIKRVYVSITCGVPTSVSGRVDIPIGRDSNNRIRMAAIPGSPKSGKSRHAVSRY 304

Query: 941  RVIEILAGGSSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMVLALLQQRNPS 1120
            +VIE LAGG SALVEWRLETGRTHQIRAHAKYLGIPL+GDEVYGGTK+M L+LLQ + P 
Sbjct: 305  KVIEELAGGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQPKTPP 364

Query: 1121 SLYGQLLQLVSRLERPCLHALTLGFMHPHTGEKVSFSRLPPEDFAEVLSRLRAISTEKL 1297
              +G+L QLVSR+ERPCLHALTLGF HP TGE + F+RLPP DFAE+LS LRAI+TEK+
Sbjct: 365  RFHGKLSQLVSRIERPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAINTEKV 423