BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010378
         (529 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018842360.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   286   2e-86
XP_019198973.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   285   6e-86
XP_019194732.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   285   6e-86
XP_019198972.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   285   6e-86
KHG00372.1 DNA-directed RNA polymerase I subunit rpa[2] [Gossypi...   277   7e-86
XP_010251904.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   284   1e-85
XP_016513901.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   264   2e-85
CAN70028.1 hypothetical protein VITISV_029145 [Vitis vinifera]        283   2e-85
CBI29879.3 unnamed protein product, partial [Vitis vinifera]          283   4e-85
XP_010653802.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   283   4e-85
XP_017257919.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   281   1e-84
XP_017257918.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   281   1e-84
KZM92164.1 hypothetical protein DCAR_020471 [Daucus carota subsp...   281   1e-84
XP_011075204.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   281   2e-84
XP_016741115.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   280   4e-84
XP_010105335.1 DNA-directed RNA polymerase I subunit rpa1 [Morus...   278   1e-83
XP_016742446.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   278   1e-83
XP_012470632.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   277   3e-83
XP_017622035.1 PREDICTED: DNA-directed RNA polymerase I subunit ...   277   3e-83
EOY09358.1 Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]      274   3e-82

>XP_018842360.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Juglans regia]
           XP_018842361.1 PREDICTED: DNA-directed RNA polymerase I
           subunit 1 [Juglans regia]
          Length = 1708

 Score =  286 bits (732), Expect = 2e-86
 Identities = 141/179 (78%), Positives = 155/179 (86%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFRPP+ G DSVMEHPQT LLGKVL SNI+LGNAH NN ERSKIV+R
Sbjct: 346 SMFFLETILVPPIKFRPPSKGGDSVMEHPQTVLLGKVLQSNISLGNAHVNNLERSKIVSR 405

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W DLQQSIN+L+D KT+     RNV+ GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 406 WMDLQQSINVLFDSKTATGQGQRNVASGICQLLEKKEGMFRQKMMGKRVNFACRSVISPD 465

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  LR AIINGS+IHPGAT Y DK+   +LP
Sbjct: 466 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKLRNAIINGSDIHPGATQYGDKLDTKQLP 524


>XP_019198973.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like isoform X2
           [Ipomoea nil]
          Length = 1686

 Score =  285 bits (729), Expect = 6e-86
 Identities = 138/179 (77%), Positives = 157/179 (87%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+EA+LV PIKFRPP  G DSVMEHP T +L KVL SNIALGNAH N +ERSKI+NR
Sbjct: 352 SMFFLEAVLVPPIKFRPPAKGGDSVMEHPHTVMLNKVLQSNIALGNAHVNTTERSKIINR 411

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W +LQQS+N+L+D KT+M+   ++V  GICQLLEKKEGIFRQKMMGKRVNF+CRSVISPD
Sbjct: 412 WMELQQSVNVLFDSKTAMAQGQKDVGTGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 471

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNVA LR AIING EIHPGA +Y+D+V+ +KLP
Sbjct: 472 PYLAVNEIGIPPYFALRLTYPERVTPWNVAKLRDAIINGPEIHPGAMSYSDRVSTFKLP 530


>XP_019194732.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Ipomoea
           nil] XP_019194733.1 PREDICTED: DNA-directed RNA
           polymerase I subunit 1-like [Ipomoea nil] XP_019194734.1
           PREDICTED: DNA-directed RNA polymerase I subunit 1-like
           [Ipomoea nil]
          Length = 1694

 Score =  285 bits (729), Expect = 6e-86
 Identities = 138/179 (77%), Positives = 157/179 (87%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+EA+LV PIKFRPP  G DSVMEHP T +L KVL SNIALGNAH N +ERSKI+NR
Sbjct: 352 SMFFLEAVLVPPIKFRPPAKGGDSVMEHPHTVMLNKVLQSNIALGNAHVNTTERSKIINR 411

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W +LQQS+N+L+D KT+M+   ++V  GICQLLEKKEGIFRQKMMGKRVNF+CRSVISPD
Sbjct: 412 WMELQQSVNVLFDSKTAMAQGQKDVGTGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 471

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNVA LR AIING EIHPGA +Y+D+V+ +KLP
Sbjct: 472 PYLAVNEIGIPPYFALRLTYPERVTPWNVAKLRDAIINGPEIHPGAMSYSDRVSTFKLP 530


>XP_019198972.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like isoform X1
           [Ipomoea nil]
          Length = 1696

 Score =  285 bits (729), Expect = 6e-86
 Identities = 138/179 (77%), Positives = 157/179 (87%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+EA+LV PIKFRPP  G DSVMEHP T +L KVL SNIALGNAH N +ERSKI+NR
Sbjct: 352 SMFFLEAVLVPPIKFRPPAKGGDSVMEHPHTVMLNKVLQSNIALGNAHVNTTERSKIINR 411

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W +LQQS+N+L+D KT+M+   ++V  GICQLLEKKEGIFRQKMMGKRVNF+CRSVISPD
Sbjct: 412 WMELQQSVNVLFDSKTAMAQGQKDVGTGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 471

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNVA LR AIING EIHPGA +Y+D+V+ +KLP
Sbjct: 472 PYLAVNEIGIPPYFALRLTYPERVTPWNVAKLRDAIINGPEIHPGAMSYSDRVSTFKLP 530


>KHG00372.1 DNA-directed RNA polymerase I subunit rpa[2] [Gossypium arboreum]
          Length = 789

 Score =  277 bits (708), Expect = 7e-86
 Identities = 136/179 (75%), Positives = 158/179 (88%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFR PT G DSVMEHPQT LL KVL +NI+LGNA++N+ + SK++ R
Sbjct: 340 SMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSKVIVR 399

Query: 349 -WWDLQQSINLLYDGKTSMS--RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
            W DLQQSINLL+D KT+MS  R+VSPGICQLLE+KEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 400 LWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPD 459

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  +R+AIINGSEIHPGAT+Y DK++  +LP
Sbjct: 460 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKVREAIINGSEIHPGATHYVDKLSTQRLP 518


>XP_010251904.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Nelumbo
           nucifera]
          Length = 1676

 Score =  284 bits (727), Expect = 1e-85
 Identities = 141/177 (79%), Positives = 153/177 (86%), Gaps = 1/177 (0%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF EALLV PIKFRPP    DSVMEHPQT LLGKVL SNIALGNAH N+S+RSKI+ R
Sbjct: 368 SMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALGNAHANSSDRSKIIPR 427

Query: 349 WWDLQQSINLLYDGKTSMSR-NVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPDPY 173
           W DLQQ++N+LYD KTS  R N + GICQLLEKKEGIFRQKMMGKRVN++CRSVISPDPY
Sbjct: 428 WMDLQQTVNILYDSKTSGQRDNTATGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPY 487

Query: 172 LAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           LAVNEIGIPPYFALRLTYPERVTPWNV  LR AIING+E HPGAT+Y DK+A  KLP
Sbjct: 488 LAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHPGATHYVDKLATVKLP 544


>XP_016513901.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like, partial
           [Nicotiana tabacum]
          Length = 353

 Score =  264 bits (674), Expect = 2e-85
 Identities = 126/179 (70%), Positives = 150/179 (83%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF++++LV PI+FRPP  G DSVMEHP T LLGKVL SNIALGNAH N + RSKI++R
Sbjct: 108 SMFFLDSILVPPIRFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNRAGRSKIISR 167

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
             DLQQS+N+L+D KT+     ++V  GICQLLEKKEGIFRQKMMGKRVNF+CRSVISPD
Sbjct: 168 LMDLQQSVNILFDSKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPD 227

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYL+VNEIG+PPYFALRLTYPERVTPWN   +R +IING E HPGA ++AD+++  KLP
Sbjct: 228 PYLSVNEIGVPPYFALRLTYPERVTPWNAGKMRDSIINGPENHPGALSFADRISTVKLP 286


>CAN70028.1 hypothetical protein VITISV_029145 [Vitis vinifera]
          Length = 1350

 Score =  283 bits (723), Expect = 2e-85
 Identities = 138/178 (77%), Positives = 154/178 (86%), Gaps = 3/178 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFRPP+ G  SVMEHPQT LLGKVL +NIALGNAH NNSERSKI++R
Sbjct: 453 SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 512

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W DLQQSIN+L+DGKT+     R+   GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 513 WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 572

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKL 5
           PYLAVNEIGIPPYFALRLTYPE+VTPWNV  LR AIING EIHPGAT+Y DK++  KL
Sbjct: 573 PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKL 630


>CBI29879.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1669

 Score =  283 bits (723), Expect = 4e-85
 Identities = 138/178 (77%), Positives = 154/178 (86%), Gaps = 3/178 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFRPP+ G  SVMEHPQT LLGKVL +NIALGNAH NNSERSKI++R
Sbjct: 334 SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 393

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W DLQQSIN+L+DGKT+     R+   GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 394 WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 453

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKL 5
           PYLAVNEIGIPPYFALRLTYPE+VTPWNV  LR AIING EIHPGAT+Y DK++  KL
Sbjct: 454 PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKL 511


>XP_010653802.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Vitis vinifera]
          Length = 1691

 Score =  283 bits (723), Expect = 4e-85
 Identities = 138/178 (77%), Positives = 154/178 (86%), Gaps = 3/178 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFRPP+ G  SVMEHPQT LLGKVL +NIALGNAH NNSERSKI++R
Sbjct: 356 SMFFLETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISR 415

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W DLQQSIN+L+DGKT+     R+   GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 416 WMDLQQSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPD 475

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKL 5
           PYLAVNEIGIPPYFALRLTYPE+VTPWNV  LR AIING EIHPGAT+Y DK++  KL
Sbjct: 476 PYLAVNEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKL 533


>XP_017257919.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X2
           [Daucus carota subsp. sativus]
          Length = 1527

 Score =  281 bits (719), Expect = 1e-84
 Identities = 139/176 (78%), Positives = 151/176 (85%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFFI+ALLV P KFRPP +  DSVMEHPQTG + KVL +NIAL NA  NNSE S IV R
Sbjct: 219 SMFFIDALLVPPTKFRPPAVTADSVMEHPQTGHIIKVLNANIALCNARANNSEPSIIVRR 278

Query: 349 WWDLQQSINLLYDGKTSMSRNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPDPYL 170
           W DLQQSINL++D KTSMSR+ +PGICQLLEKKEGIFRQKMMGKRVN SCRSVISPDPYL
Sbjct: 279 WLDLQQSINLMFDSKTSMSRSATPGICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYL 338

Query: 169 AVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           AVNEIGIPPYFALRLTYP +VTPWN   LR+AIING EIHPGATN+ DKV+N KLP
Sbjct: 339 AVNEIGIPPYFALRLTYPVKVTPWNAQKLREAIINGPEIHPGATNFVDKVSNSKLP 394


>XP_017257918.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 isoform X1
           [Daucus carota subsp. sativus]
          Length = 1638

 Score =  281 bits (719), Expect = 1e-84
 Identities = 139/176 (78%), Positives = 151/176 (85%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFFI+ALLV P KFRPP +  DSVMEHPQTG + KVL +NIAL NA  NNSE S IV R
Sbjct: 330 SMFFIDALLVPPTKFRPPAVTADSVMEHPQTGHIIKVLNANIALCNARANNSEPSIIVRR 389

Query: 349 WWDLQQSINLLYDGKTSMSRNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPDPYL 170
           W DLQQSINL++D KTSMSR+ +PGICQLLEKKEGIFRQKMMGKRVN SCRSVISPDPYL
Sbjct: 390 WLDLQQSINLMFDSKTSMSRSATPGICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYL 449

Query: 169 AVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           AVNEIGIPPYFALRLTYP +VTPWN   LR+AIING EIHPGATN+ DKV+N KLP
Sbjct: 450 AVNEIGIPPYFALRLTYPVKVTPWNAQKLREAIINGPEIHPGATNFVDKVSNSKLP 505


>KZM92164.1 hypothetical protein DCAR_020471 [Daucus carota subsp. sativus]
          Length = 1654

 Score =  281 bits (719), Expect = 1e-84
 Identities = 139/176 (78%), Positives = 151/176 (85%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFFI+ALLV P KFRPP +  DSVMEHPQTG + KVL +NIAL NA  NNSE S IV R
Sbjct: 330 SMFFIDALLVPPTKFRPPAVTADSVMEHPQTGHIIKVLNANIALCNARANNSEPSIIVRR 389

Query: 349 WWDLQQSINLLYDGKTSMSRNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPDPYL 170
           W DLQQSINL++D KTSMSR+ +PGICQLLEKKEGIFRQKMMGKRVN SCRSVISPDPYL
Sbjct: 390 WLDLQQSINLMFDSKTSMSRSATPGICQLLEKKEGIFRQKMMGKRVNHSCRSVISPDPYL 449

Query: 169 AVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           AVNEIGIPPYFALRLTYP +VTPWN   LR+AIING EIHPGATN+ DKV+N KLP
Sbjct: 450 AVNEIGIPPYFALRLTYPVKVTPWNAQKLREAIINGPEIHPGATNFVDKVSNSKLP 505


>XP_011075204.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
           indicum]
          Length = 1701

 Score =  281 bits (718), Expect = 2e-84
 Identities = 138/179 (77%), Positives = 152/179 (84%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E++LV PIKFRPP  G DSVMEHPQT LLGKVL SNIALGNAH NN+ERSKI+NR
Sbjct: 357 SMFFLESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINR 416

Query: 349 WWDLQQSINLLYDGKTSMS---RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
           W DLQ SIN+L+D KT+ S   ++ + GICQ LEKKEGIFRQKMMGKRVNF+CRSVISPD
Sbjct: 417 WMDLQLSINVLFDSKTANSQAQKDGTSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPD 476

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWN   LR A+ING EIHPGAT Y D V+  KLP
Sbjct: 477 PYLAVNEIGIPPYFALRLTYPERVTPWNAGKLRGAVINGPEIHPGATTYVDSVSTVKLP 535


>XP_016741115.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Gossypium
           hirsutum]
          Length = 1674

 Score =  280 bits (715), Expect = 4e-84
 Identities = 137/179 (76%), Positives = 158/179 (88%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFR PT G DSVMEHPQT LL KVL +NI+LGNAH+N+ + SK++ R
Sbjct: 340 SMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAHNNDLQSSKVIVR 399

Query: 349 -WWDLQQSINLLYDGKTSMS--RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
            W DLQQSINLL+D KT+MS  R+VSPGICQLLE+KEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 400 LWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPD 459

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  LR+AIINGSE+HPGAT+Y DK++  +LP
Sbjct: 460 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSELHPGATHYVDKLSTQRLP 518


>XP_010105335.1 DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
           EXC04356.1 DNA-directed RNA polymerase I subunit rpa1
           [Morus notabilis]
          Length = 1770

 Score =  278 bits (712), Expect = 1e-83
 Identities = 136/177 (76%), Positives = 150/177 (84%), Gaps = 1/177 (0%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFRPP+ G DSVMEHP T LL KVL +NI LGNAH N  E +KIV R
Sbjct: 272 SMFFLETILVPPIKFRPPSKGGDSVMEHPHTVLLNKVLQANIELGNAHVNKLEYTKIVRR 331

Query: 349 WWDLQQSINLLYDGKTSMS-RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPDPY 173
           W DLQQS+N+++D KTS   RNV+PGICQLLEKKEGIFRQKMMGKRVNF+CRSVISPDPY
Sbjct: 332 WMDLQQSVNVMFDSKTSTGQRNVAPGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPY 391

Query: 172 LAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           LAVNEIGIPPYFALRLTYPERVTPWNV  LR AIING E HPGAT+Y DK++  KLP
Sbjct: 392 LAVNEIGIPPYFALRLTYPERVTPWNVVKLRDAIINGPETHPGATHYVDKLSTVKLP 448


>XP_016742446.1 PREDICTED: DNA-directed RNA polymerase I subunit 1-like [Gossypium
           hirsutum]
          Length = 1674

 Score =  278 bits (711), Expect = 1e-83
 Identities = 137/179 (76%), Positives = 158/179 (88%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFR PT G DSVMEHPQT LL KVL +NI+LGNA++N+ + SK++ R
Sbjct: 340 SMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLLANISLGNAYNNDLQSSKVIVR 399

Query: 349 -WWDLQQSINLLYDGKTSMS--RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
            W DLQQSINLL+D KT+MS  R+VSPGICQLLE+KEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 400 LWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPD 459

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  LR+AIINGSEIHPGAT+Y DK++  +LP
Sbjct: 460 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEIHPGATHYVDKLSTQRLP 518


>XP_012470632.1 PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
           raimondii] KJB19219.1 hypothetical protein
           B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score =  277 bits (709), Expect = 3e-83
 Identities = 136/179 (75%), Positives = 158/179 (88%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFR PT G DSVMEHPQT LL KVL +NI+LGNA++N+ + SK++ R
Sbjct: 340 SMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSKVIVR 399

Query: 349 -WWDLQQSINLLYDGKTSMS--RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
            W DLQQSINLL+D KT+MS  R+VSPGICQLLE+KEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 400 LWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPD 459

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  LR+AIINGSE+HPGAT+Y DK++  +LP
Sbjct: 460 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSELHPGATHYVDKLSTQRLP 518


>XP_017622035.1 PREDICTED: DNA-directed RNA polymerase I subunit 1 [Gossypium
           arboreum]
          Length = 1450

 Score =  277 bits (708), Expect = 3e-83
 Identities = 136/179 (75%), Positives = 158/179 (88%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFR PT G DSVMEHPQT LL KVL +NI+LGNA++N+ + SK++ R
Sbjct: 340 SMFFLETVLVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSKVIVR 399

Query: 349 -WWDLQQSINLLYDGKTSMS--RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
            W DLQQSINLL+D KT+MS  R+VSPGICQLLE+KEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 400 LWMDLQQSINLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPD 459

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  +R+AIINGSEIHPGAT+Y DK++  +LP
Sbjct: 460 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKVREAIINGSEIHPGATHYVDKLSTQRLP 518


>EOY09358.1 Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  274 bits (701), Expect = 3e-82
 Identities = 137/179 (76%), Positives = 154/179 (86%), Gaps = 3/179 (1%)
 Frame = -1

Query: 529 SMFFIEALLVSPIKFRPPTMGTDSVMEHPQTGLLGKVLTSNIALGNAHDNNSERSKIVNR 350
           SMFF+E +LV PIKFR PT G DSVMEHPQT LL KVL +NI+LGNA+ NN + SK V R
Sbjct: 49  SMFFLETILVPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYTNNLQSSKAVVR 108

Query: 349 -WWDLQQSINLLYDGKTSMS--RNVSPGICQLLEKKEGIFRQKMMGKRVNFSCRSVISPD 179
            W DLQQS+NLL+D KT+MS  R+VS GICQLLEKKEG+FRQKMMGKRVNF+CRSVISPD
Sbjct: 109 LWMDLQQSVNLLFDSKTAMSQGRDVSSGICQLLEKKEGMFRQKMMGKRVNFACRSVISPD 168

Query: 178 PYLAVNEIGIPPYFALRLTYPERVTPWNVANLRKAIINGSEIHPGATNYADKVANWKLP 2
           PYLAVNEIGIPPYFALRLTYPERVTPWNV  LR+AIINGSE HPGAT+Y DK++  +LP
Sbjct: 169 PYLAVNEIGIPPYFALRLTYPERVTPWNVVKLREAIINGSEFHPGATHYVDKLSTKRLP 227