BLASTX nr result

ID: Panax24_contig00010376 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010376
         (356 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

APY22349.1 geranyl pyrophosphate synthase, partial [Hedera helix]      99   4e-22
XP_017249052.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    70   1e-11
XP_019262263.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    64   2e-09
XP_009793552.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    62   1e-08
XP_009793550.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    62   1e-08
AOX15286.1 geranyl diphosphate synthase [Withania somnifera]           61   1e-08
KVH87967.1 Polyprenyl synthetase [Cynara cardunculus var. scolymus]    61   1e-08
XP_009600023.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    60   5e-08
XP_009600020.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    60   5e-08
NP_001312253.1 solanesyl diphosphate synthase 3, chloroplastic/m...    60   5e-08
XP_015083260.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    56   8e-07
XP_012846618.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    55   1e-06
XP_015159655.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    55   2e-06
XP_006364882.1 PREDICTED: solanesyl diphosphate synthase 3, chlo...    55   2e-06
NP_001234089.1 geranyl pyrophosphate synthase [Solanum lycopersi...    55   2e-06

>APY22349.1 geranyl pyrophosphate synthase, partial [Hedera helix]
          Length = 419

 Score = 99.0 bits (245), Expect = 4e-22
 Identities = 48/63 (76%), Positives = 48/63 (76%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLFFRGLSRISRTSY RCRWIYSLPHNQ             STHKVLGCRVIYSWISG F
Sbjct: 1   MLFFRGLSRISRTSYYRCRWIYSLPHNQHLSHSSHFLSPPDSTHKVLGCRVIYSWISGTF 60

Query: 9   NGV 1
           NGV
Sbjct: 61  NGV 63


>XP_017249052.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X1 [Daucus carota
           subsp. sativus]
          Length = 428

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLP--HNQXXXXXXXXXXXXXSTH-----KVLGCRVIY 31
           M  FRGLSRISR+SYN+CR+IYSLP  H+               +H     KVLGCR+IY
Sbjct: 1   MSLFRGLSRISRSSYNQCRFIYSLPRHHHPLQQQLSHGHSNQFVSHFDSNRKVLGCRIIY 60

Query: 30  SWISGAFNGV 1
           SWISGAF  +
Sbjct: 61  SWISGAFTSI 70


>XP_019262263.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial [Nicotiana attenuata]
           OIT37948.1 solanesyl diphosphate synthase 3,
           chloroplasticmitochondrial [Nicotiana attenuata]
          Length = 415

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLF RGLS+ISR S NRCRW+ S    Q             ++HKVLGCRVI+SW+S A 
Sbjct: 1   MLFARGLSQISRRSINRCRWLRS--QQQQFHHSNHFPSPIDASHKVLGCRVIHSWVSNAL 58

Query: 9   NGV 1
           +G+
Sbjct: 59  SGI 61


>XP_009793552.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X3 [Nicotiana
           sylvestris] XP_016458129.1 PREDICTED: solanesyl
           diphosphate synthase 3, chloroplastic/mitochondrial-like
           isoform X3 [Nicotiana tabacum]
          Length = 364

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 39/63 (61%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLF RG S+ISR S NRCRW+ S    Q             ++HKVLGCRVI+SW+S A 
Sbjct: 1   MLFARGWSQISRRSINRCRWLRS--QQQQFHHSNHFPSPIDASHKVLGCRVIHSWVSNAL 58

Query: 9   NGV 1
           +G+
Sbjct: 59  SGI 61


>XP_009793550.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X1 [Nicotiana
           sylvestris]
          Length = 415

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 39/63 (61%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLF RG S+ISR S NRCRW+ S    Q             ++HKVLGCRVI+SW+S A 
Sbjct: 1   MLFARGWSQISRRSINRCRWLRS--QQQQFHHSNHFPSPIDASHKVLGCRVIHSWVSNAL 58

Query: 9   NGV 1
           +G+
Sbjct: 59  SGI 61


>AOX15286.1 geranyl diphosphate synthase [Withania somnifera]
          Length = 415

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           M+F R LS+ISR  ++RCRW++SLP +Q             ++ KVLGCRVI+SW+S A 
Sbjct: 1   MIFSRVLSQISRNRFSRCRWLFSLPPHQ----QLHHSNNIYASQKVLGCRVIHSWVSNAL 56

Query: 9   NGV 1
           +G+
Sbjct: 57  SGI 59


>KVH87967.1 Polyprenyl synthetase [Cynara cardunculus var. scolymus]
          Length = 470

 Score = 61.2 bits (147), Expect = 1e-08
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
 Frame = -3

Query: 204 YTYRKMLFFRGLSRISRT--SYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIY 31
           + + KM  +RG+SRISRT  SYNRCRW+Y    +Q             S+ +VLGCRV Y
Sbjct: 81  FRFGKMFSYRGISRISRTASSYNRCRWLYCSTPHQQLSPSSRFRSFMESSKEVLGCRVNY 140

Query: 30  SWISGAFN 7
           SWIS  F+
Sbjct: 141 SWISRPFS 148


>XP_009600023.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X3 [Nicotiana
           tomentosiformis] XP_016451460.1 PREDICTED: solanesyl
           diphosphate synthase 3, chloroplastic/mitochondrial-like
           isoform X3 [Nicotiana tabacum]
          Length = 364

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLF RGLS+ISR S NR +W+   P  Q             ++HKVLGCRVI+SW+S A 
Sbjct: 1   MLFARGLSQISRRSINRYQWL--CPQQQQFHHSNHFPSPIDASHKVLGCRVIHSWVSNAL 58

Query: 9   NGV 1
           +G+
Sbjct: 59  SGI 61


>XP_009600020.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X1 [Nicotiana
           tomentosiformis] XP_016451457.1 PREDICTED: solanesyl
           diphosphate synthase 3, chloroplastic/mitochondrial-like
           isoform X1 [Nicotiana tabacum]
          Length = 415

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLF RGLS+ISR S NR +W+   P  Q             ++HKVLGCRVI+SW+S A 
Sbjct: 1   MLFARGLSQISRRSINRYQWL--CPQQQQFHHSNHFPSPIDASHKVLGCRVIHSWVSNAL 58

Query: 9   NGV 1
           +G+
Sbjct: 59  SGI 61


>NP_001312253.1 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like
           [Nicotiana tabacum] AHL84161.1 geranyl pyrophosphate
           synthase [Nicotiana tabacum]
          Length = 415

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           MLF RGLS+ISR S NR +W+   P  Q             ++HKVLGCRVI+SW+S A 
Sbjct: 1   MLFARGLSQISRRSINRYQWL--CPQQQQFHHSNHFPSPIDASHKVLGCRVIHSWVSNAL 58

Query: 9   NGV 1
           +G+
Sbjct: 59  SGI 61


>XP_015083260.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial [Solanum pennellii]
          Length = 415

 Score = 56.2 bits (134), Expect = 8e-07
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           M+F +GLS+ISR  ++RCRW++SL                    KVLGCRVI+SW+S A 
Sbjct: 1   MIFSKGLSQISRNRFSRCRWLFSL----RPIPQLHQSNHIHDPPKVLGCRVIHSWVSNAL 56

Query: 9   NGV 1
           +G+
Sbjct: 57  SGI 59


>XP_012846618.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X1 [Erythranthe
           guttata] EYU29662.1 hypothetical protein
           MIMGU_mgv1a007049mg [Erythranthe guttata]
          Length = 421

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYS-LPHNQXXXXXXXXXXXXXS---THKVLGCRVIYSWI 22
           M   RGL+R+S++ Y RCRW+YS L  N                  +H+VLGCRVIYSW+
Sbjct: 1   MFSVRGLTRLSKSGYARCRWVYSSLGSNSSVPLLEHPTHFRSHLQPSHEVLGCRVIYSWV 60

Query: 21  SGAFNGV 1
           S A + V
Sbjct: 61  SSALSSV 67


>XP_015159655.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X2 [Solanum
           tuberosum]
          Length = 382

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           M+F +GLS+ISR  ++RCRW++S    Q                KVLGCRVI+SW+S A 
Sbjct: 1   MIFSKGLSQISRNRFSRCRWLFSSRPIQQLHQSNHIHDPP----KVLGCRVIHSWVSNAL 56

Query: 9   NGV 1
           +G+
Sbjct: 57  SGI 59


>XP_006364882.1 PREDICTED: solanesyl diphosphate synthase 3,
           chloroplastic/mitochondrial isoform X1 [Solanum
           tuberosum]
          Length = 415

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           M+F +GLS+ISR  ++RCRW++S    Q                KVLGCRVI+SW+S A 
Sbjct: 1   MIFSKGLSQISRNRFSRCRWLFSSRPIQQLHQSNHIHDPP----KVLGCRVIHSWVSNAL 56

Query: 9   NGV 1
           +G+
Sbjct: 57  SGI 59


>NP_001234089.1 geranyl pyrophosphate synthase [Solanum lycopersicum]
           XP_019070583.1 PREDICTED: geranyl pyrophosphate synthase
           isoform X1 [Solanum lycopersicum] ABB88703.1 geranyl
           pyrophosphate synthase [Solanum lycopersicum]
          Length = 415

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 26/63 (41%), Positives = 38/63 (60%)
 Frame = -3

Query: 189 MLFFRGLSRISRTSYNRCRWIYSLPHNQXXXXXXXXXXXXXSTHKVLGCRVIYSWISGAF 10
           M+F +GL++ISR  ++RCRW++SL                    KVLGCRVI+SW+S A 
Sbjct: 1   MIFSKGLAQISRNRFSRCRWLFSL----RPIPQLHQSNHIHDPPKVLGCRVIHSWVSNAL 56

Query: 9   NGV 1
           +G+
Sbjct: 57  SGI 59


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