BLASTX nr result

ID: Panax24_contig00010348 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010348
         (566 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019081157.1 PREDICTED: eukaryotic translation initiation fact...    64   1e-08
CAN77792.1 hypothetical protein VITISV_043311 [Vitis vinifera]         64   1e-08
XP_002269466.2 PREDICTED: eukaryotic translation initiation fact...    64   1e-08
XP_010661422.1 PREDICTED: eukaryotic translation initiation fact...    64   1e-08
XP_010661419.1 PREDICTED: eukaryotic translation initiation fact...    64   1e-08
XP_019168260.1 PREDICTED: eukaryotic translation initiation fact...    61   2e-07
XP_019168259.1 PREDICTED: eukaryotic translation initiation fact...    61   2e-07

>XP_019081157.1 PREDICTED: eukaryotic translation initiation factor 4G isoform X4
            [Vitis vinifera]
          Length = 1778

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNE-QKKPGKKGYSLPQNQVGQQ-------XXXXXXXXSGEHVETVDT 411
            G  RE   RS+S  E QKK GKKG+  PQ QVG Q                   +   +T
Sbjct: 649  GRRRETLGRSNSIKEHQKKTGKKGHPQPQQQVGGQTASLSNLPSRPMERGISSKIGVTET 708

Query: 410  IKSP----LLGSIGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGA---- 255
            ++       LG+   V D TREP++T    +  AS+ K +    G      KT GA    
Sbjct: 709  LEPKAVHGTLGNSEDVLDFTREPVSTITADSADASELKADSFGEGSAHGPPKTPGAGITN 768

Query: 254  --------DSSDISLENEIPKPEATNTKERVMSH--EESKEDDSRFEVTSTAISFKFSGS 105
                      SD SL+NE+ K      + +  S   E  K+D    E +S +IS     +
Sbjct: 769  HIKDTRNEKQSDFSLQNELSKYSTVAIEGQGESELPEGFKQDAHCLEKSSESISSISLEA 828

Query: 104  VDQTEKNPVLAVTMTSSETGSLETTQQ 24
            V Q   +  L VT +S E G +ET Q+
Sbjct: 829  VKQPVPDSELKVTTSSIEVGLVETAQE 855


>CAN77792.1 hypothetical protein VITISV_043311 [Vitis vinifera]
          Length = 1778

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNE-QKKPGKKGYSLPQNQVGQQ-------XXXXXXXXSGEHVETVDT 411
            G  RE   RS+S  E QKK GKKG+  PQ QVG Q                   +   +T
Sbjct: 646  GRRRETLGRSNSIKEHQKKTGKKGHPQPQQQVGGQTASLSNLPSRPMERGISSKIGVTET 705

Query: 410  IKSP----LLGSIGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGA---- 255
            ++       LG+   V D TREP++T    +  AS+ K +    G      KT GA    
Sbjct: 706  LEPKAVHGTLGNSEDVLDFTREPVSTITADSADASELKADSFGEGSAHGPPKTPGAGITN 765

Query: 254  --------DSSDISLENEIPKPEATNTKERVMSH--EESKEDDSRFEVTSTAISFKFSGS 105
                      SD SL+NE+ K      + +  S   E  K+D    E +S +IS     +
Sbjct: 766  HIKDTRNEKQSDFSLQNELSKYSTVAIEGQGESELPEGFKQDAHCLEKSSESISSISLEA 825

Query: 104  VDQTEKNPVLAVTMTSSETGSLETTQQ 24
            V Q   +  L VT +S E G +ET Q+
Sbjct: 826  VKQPVPDSELKVTTSSIEVGLVETAQE 852


>XP_002269466.2 PREDICTED: eukaryotic translation initiation factor 4G isoform X3
            [Vitis vinifera]
          Length = 1935

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNE-QKKPGKKGYSLPQNQVGQQ-------XXXXXXXXSGEHVETVDT 411
            G  RE   RS+S  E QKK GKKG+  PQ QVG Q                   +   +T
Sbjct: 646  GRRRETLGRSNSIKEHQKKTGKKGHPQPQQQVGGQTASLSNLPSRPMERGISSKIGVTET 705

Query: 410  IKSP----LLGSIGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGA---- 255
            ++       LG+   V D TREP++T    +  AS+ K +    G      KT GA    
Sbjct: 706  LEPKAVHGTLGNSEDVLDFTREPVSTITADSADASELKADSFGEGSAHGPPKTPGAGITN 765

Query: 254  --------DSSDISLENEIPKPEATNTKERVMSH--EESKEDDSRFEVTSTAISFKFSGS 105
                      SD SL+NE+ K      + +  S   E  K+D    E +S +IS     +
Sbjct: 766  HIKDTRNEKQSDFSLQNELSKYSTVAIEGQGESELPEGFKQDAHCLEKSSESISSISLEA 825

Query: 104  VDQTEKNPVLAVTMTSSETGSLETTQQ 24
            V Q   +  L VT +S E G +ET Q+
Sbjct: 826  VKQPVPDSELKVTTSSIEVGLVETAQE 852


>XP_010661422.1 PREDICTED: eukaryotic translation initiation factor 4G isoform X2
            [Vitis vinifera]
          Length = 1936

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNE-QKKPGKKGYSLPQNQVGQQ-------XXXXXXXXSGEHVETVDT 411
            G  RE   RS+S  E QKK GKKG+  PQ QVG Q                   +   +T
Sbjct: 647  GRRRETLGRSNSIKEHQKKTGKKGHPQPQQQVGGQTASLSNLPSRPMERGISSKIGVTET 706

Query: 410  IKSP----LLGSIGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGA---- 255
            ++       LG+   V D TREP++T    +  AS+ K +    G      KT GA    
Sbjct: 707  LEPKAVHGTLGNSEDVLDFTREPVSTITADSADASELKADSFGEGSAHGPPKTPGAGITN 766

Query: 254  --------DSSDISLENEIPKPEATNTKERVMSH--EESKEDDSRFEVTSTAISFKFSGS 105
                      SD SL+NE+ K      + +  S   E  K+D    E +S +IS     +
Sbjct: 767  HIKDTRNEKQSDFSLQNELSKYSTVAIEGQGESELPEGFKQDAHCLEKSSESISSISLEA 826

Query: 104  VDQTEKNPVLAVTMTSSETGSLETTQQ 24
            V Q   +  L VT +S E G +ET Q+
Sbjct: 827  VKQPVPDSELKVTTSSIEVGLVETAQE 853


>XP_010661419.1 PREDICTED: eukaryotic translation initiation factor 4G isoform X1
            [Vitis vinifera] XP_010661420.1 PREDICTED: eukaryotic
            translation initiation factor 4G isoform X1 [Vitis
            vinifera] XP_010661421.1 PREDICTED: eukaryotic
            translation initiation factor 4G isoform X1 [Vitis
            vinifera]
          Length = 1938

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNE-QKKPGKKGYSLPQNQVGQQ-------XXXXXXXXSGEHVETVDT 411
            G  RE   RS+S  E QKK GKKG+  PQ QVG Q                   +   +T
Sbjct: 649  GRRRETLGRSNSIKEHQKKTGKKGHPQPQQQVGGQTASLSNLPSRPMERGISSKIGVTET 708

Query: 410  IKSP----LLGSIGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGA---- 255
            ++       LG+   V D TREP++T    +  AS+ K +    G      KT GA    
Sbjct: 709  LEPKAVHGTLGNSEDVLDFTREPVSTITADSADASELKADSFGEGSAHGPPKTPGAGITN 768

Query: 254  --------DSSDISLENEIPKPEATNTKERVMSH--EESKEDDSRFEVTSTAISFKFSGS 105
                      SD SL+NE+ K      + +  S   E  K+D    E +S +IS     +
Sbjct: 769  HIKDTRNEKQSDFSLQNELSKYSTVAIEGQGESELPEGFKQDAHCLEKSSESISSISLEA 828

Query: 104  VDQTEKNPVLAVTMTSSETGSLETTQQ 24
            V Q   +  L VT +S E G +ET Q+
Sbjct: 829  VKQPVPDSELKVTTSSIEVGLVETAQE 855


>XP_019168260.1 PREDICTED: eukaryotic translation initiation factor 4G-like isoform
            X2 [Ipomoea nil]
          Length = 1766

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNEQKKPGKKGYSLPQNQVGQQXXXXXXXXSGEHVETVDTIKSPLLGS 387
            GT+ E  +  DS + QKK G +G    Q+Q+ +Q                  +  P L +
Sbjct: 550  GTTEEA-SVPDSKDWQKKQGHRGPQSTQDQIAKQSLVSPSLSP-----VTREVDMPALAT 603

Query: 386  IGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGADSSDISLENEIPKPEA 207
               + +TTREP +    I     D+   K++ G+T  S+   G     +SLE + P PE 
Sbjct: 604  SVNL-ETTREPSS----IHSTDLDTIDAKTKEGQTQYSSNPSGT----LSLEGDPPMPET 654

Query: 206  TNTKERVMSHEES-KEDDSRFEVTSTAISFKFSGSVDQTEKNPVLAVTMTSSETGSLETT 30
             +  ++ +  ++S K+D + F  +S ++SFK S  ++QTE++ +  VT +     S+ETT
Sbjct: 655  LSKNDKDLKLQKSLKQDSNTFGASSESVSFKASELINQTEESSLQRVTNSIDCGTSVETT 714

Query: 29   QQKLEEAPV 3
             +K +E+ +
Sbjct: 715  LKKFDESAI 723


>XP_019168259.1 PREDICTED: eukaryotic translation initiation factor 4G-like isoform
            X1 [Ipomoea nil]
          Length = 1769

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
 Frame = -1

Query: 566  GTSREIFNRSDSNNEQKKPGKKGYSLPQNQVGQQXXXXXXXXSGEHVETVDTIKSPLLGS 387
            GT+ E  +  DS + QKK G +G    Q+Q+ +Q                  +  P L +
Sbjct: 553  GTTEEA-SVPDSKDWQKKQGHRGPQSTQDQIAKQSLVSPSLSP-----VTREVDMPALAT 606

Query: 386  IGPVHDTTREPLATSVVITPAASDSKTEKSEIGRTCESTKTVGADSSDISLENEIPKPEA 207
               + +TTREP +    I     D+   K++ G+T  S+   G     +SLE + P PE 
Sbjct: 607  SVNL-ETTREPSS----IHSTDLDTIDAKTKEGQTQYSSNPSGT----LSLEGDPPMPET 657

Query: 206  TNTKERVMSHEES-KEDDSRFEVTSTAISFKFSGSVDQTEKNPVLAVTMTSSETGSLETT 30
             +  ++ +  ++S K+D + F  +S ++SFK S  ++QTE++ +  VT +     S+ETT
Sbjct: 658  LSKNDKDLKLQKSLKQDSNTFGASSESVSFKASELINQTEESSLQRVTNSIDCGTSVETT 717

Query: 29   QQKLEEAPV 3
             +K +E+ +
Sbjct: 718  LKKFDESAI 726


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